RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 CD44P16070 742 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-218ENST00000519768 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
CTNNA1-218ENST00000519768 PRR29P0C7W0 189 aa10.6□□□□□ -0.71
CTNNA1-218ENST00000519768 EIF4G1Q04637 1599 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-218ENST00000519768 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
CTNNA1-218ENST00000519768 MIER1Q8N108 512 aa10.56□□□□□ -0.72
CTNNA1-218ENST00000519768 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
CTNNA1-218ENST00000519768 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
CTNNA1-218ENST00000519768 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-218ENST00000519768 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
CTNNA1-218ENST00000519768 CREBZFQ9NS37 354 aa10.48□□□□□ -0.73
CTNNA1-218ENST00000519768 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-218ENST00000519768 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-218ENST00000519768 MYO15BQ96JP2 1530 aa10.46□□□□□ -0.74
CTNNA1-218ENST00000519768 KLHL34Q8N239 644 aa10.45□□□□□ -0.74
CTNNA1-218ENST00000519768 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-218ENST00000519768 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
CTNNA1-218ENST00000519768 SCRIBQ14160 1630 aa10.41□□□□□ -0.74
CTNNA1-218ENST00000519768 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-218ENST00000519768 SPOCK2Q92563 424 aa10.4□□□□□ -0.74
CTNNA1-218ENST00000519768 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
CTNNA1-218ENST00000519768 CUX2O14529 1486 aa10.39□□□□□ -0.75
CTNNA1-218ENST00000519768 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-218ENST00000519768 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-218ENST00000519768 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
CTNNA1-218ENST00000519768 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
CTNNA1-218ENST00000519768 RTN4Q9NQC3 1192 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-218ENST00000519768 NUBP1P53384 320 aa10.3□□□□□ -0.76
CTNNA1-218ENST00000519768 PELP1Q8IZL8 1130 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-218ENST00000519768 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-218ENST00000519768 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
CTNNA1-218ENST00000519768 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
CTNNA1-218ENST00000519768 NESP48681 1621 aa10.23□□□□□ -0.77
CTNNA1-218ENST00000519768 GSE1Q14687 1217 aa10.22□□□□□ -0.77
CTNNA1-218ENST00000519768 ZCCHC6Q5VYS8 1495 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-218ENST00000519768 PKD2Q13563 968 aa10.21□□□□□ -0.77
CTNNA1-218ENST00000519768 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
CTNNA1-218ENST00000519768 RASEFQ8IZ41 740 aa10.2□□□□□ -0.78
CTNNA1-218ENST00000519768 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
CTNNA1-218ENST00000519768 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-218ENST00000519768 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
CTNNA1-218ENST00000519768 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
CTNNA1-218ENST00000519768 DCAF1Q9Y4B6 1507 aa10.17□□□□□ -0.78
CTNNA1-218ENST00000519768 CDAN1Q8IWY9 1227 aa10.16□□□□□ -0.78
CTNNA1-218ENST00000519768 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
CTNNA1-218ENST00000519768 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-218ENST00000519768 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-218ENST00000519768 C7P10643 843 aa10.12□□□□□ -0.79
CTNNA1-218ENST00000519768 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-218ENST00000519768 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
CTNNA1-218ENST00000519768 CHRM1P11229 460 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-218ENST00000519768 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-218ENST00000519768 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
CTNNA1-218ENST00000519768 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
CTNNA1-218ENST00000519768 CCDC61Q9Y6R9 512 aa10.08□□□□□ -0.8
CTNNA1-218ENST00000519768 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
CTNNA1-218ENST00000519768 ATMINO43313 823 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-218ENST00000519768 PYGBP11216 843 aa10.03□□□□□ -0.8
CTNNA1-218ENST00000519768 ATAD2BQ9ULI0 1458 aa10.02□□□□□ -0.81
CTNNA1-218ENST00000519768 RGL2O15211 777 aa10.01□□□□□ -0.81
CTNNA1-218ENST00000519768 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
CTNNA1-218ENST00000519768 MMRN1Q13201 1228 aa10□□□□□ -0.81
CTNNA1-218ENST00000519768 MS4A3Q96HJ5 214 aa9.98□□□□□ -0.81
CTNNA1-218ENST00000519768 SGIP1Q9BQI5 828 aa9.98□□□□□ -0.81
CTNNA1-218ENST00000519768 KIF21AQ7Z4S6 1674 aa9.97□□□□□ -0.81
CTNNA1-218ENST00000519768 RNF25Q96BH1 459 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-218ENST00000519768 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
CTNNA1-218ENST00000519768 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-218ENST00000519768 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
CTNNA1-218ENST00000519768 ZNF467Q7Z7K2 595 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-218ENST00000519768 MAP3K13O43283 966 aa9.93□□□□□ -0.82
CTNNA1-218ENST00000519768 SPNS2Q8IVW8 549 aa9.93□□□□□ -0.82
CTNNA1-218ENST00000519768 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
CTNNA1-218ENST00000519768 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
CTNNA1-218ENST00000519768 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-218ENST00000519768 ATN1P54259 1190 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-218ENST00000519768 BAZ1AQ9NRL2 1556 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-218ENST00000519768 IFNL1Q8IU54 200 aa9.88□□□□□ -0.83
CTNNA1-218ENST00000519768 HMGXB3Q12766 1538 aa9.87□□□□□ -0.83
CTNNA1-218ENST00000519768 RIMBP3CA6NJZ7 1639 aa9.87□□□□□ -0.83
CTNNA1-218ENST00000519768 RIMBP3BA6NNM3 1639 aa9.87□□□□□ -0.83
CTNNA1-218ENST00000519768 RIMBP3Q9UFD9 1639 aa9.87□□□□□ -0.83
CTNNA1-218ENST00000519768 PCDHB8Q9UN66 801 aa9.87□□□□□ -0.83
CTNNA1-218ENST00000519768 LAMC3Q9Y6N6 1575 aa9.85□□□□□ -0.83
CTNNA1-218ENST00000519768 ST18O60284 1047 aa9.85□□□□□ -0.83
CTNNA1-218ENST00000519768 PDAP1Q13442 181 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-218ENST00000519768 PDS5BQ9NTI5 1447 aa9.83□□□□□ -0.84
CTNNA1-218ENST00000519768 SMARCA4P51532 1647 aa9.83□□□□□ -0.84
CTNNA1-218ENST00000519768 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-218ENST00000519768 HS6ST3Q8IZP7 471 aa9.83□□□□□ -0.84
CTNNA1-218ENST00000519768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-218ENST00000519768 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
CTNNA1-218ENST00000519768 ZFP91Q96JP5 570 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-218ENST00000519768 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-218ENST00000519768 MRC2Q9UBG0 1479 aa9.81□□□□□ -0.84
CTNNA1-218ENST00000519768 PSEN1P49768 467 aa9.81□□□□□ -0.84
CTNNA1-218ENST00000519768 STK25O00506 426 aa9.8□□□□□ -0.84
CTNNA1-218ENST00000519768 WDR62O43379 1518 aa9.8□□□□□ -0.84
CTNNA1-218ENST00000519768 BBXQ8WY36 941 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-218ENST00000519768 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms