RNA–Protein interactions for RNA: ENST00000519524.1

POLB-206, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 655 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-206ENST00000519524 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
POLB-206ENST00000519524 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
POLB-206ENST00000519524 VASPP50552 380 aaPredicted RBP16.72■□□□□ 0.27
POLB-206ENST00000519524 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
POLB-206ENST00000519524 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
POLB-206ENST00000519524 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
POLB-206ENST00000519524 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
POLB-206ENST00000519524 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
POLB-206ENST00000519524 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
POLB-206ENST00000519524 CC2D2AQ9P2K1 1620 aa16.54■□□□□ 0.24
POLB-206ENST00000519524 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
POLB-206ENST00000519524 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
POLB-206ENST00000519524 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
POLB-206ENST00000519524 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
POLB-206ENST00000519524 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
POLB-206ENST00000519524 STAG3Q9UJ98 1225 aa16.41■□□□□ 0.22
POLB-206ENST00000519524 PKD2Q13563 968 aa16.29■□□□□ 0.2
POLB-206ENST00000519524 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
POLB-206ENST00000519524 LCE2DQ5TA82 110 aaPredicted RBP16.27■□□□□ 0.2
POLB-206ENST00000519524 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
POLB-206ENST00000519524 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
POLB-206ENST00000519524 SPOCK2Q92563 424 aa16.21■□□□□ 0.19
POLB-206ENST00000519524 MIER1Q8N108 512 aa16.2■□□□□ 0.18
POLB-206ENST00000519524 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
POLB-206ENST00000519524 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
POLB-206ENST00000519524 FAM163AQ96GL9 167 aaPredicted RBP16.15■□□□□ 0.18
POLB-206ENST00000519524 MAMSTRQ6ZN01 415 aa16.11■□□□□ 0.17
POLB-206ENST00000519524 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
POLB-206ENST00000519524 METRNQ9UJH8 293 aa16.11■□□□□ 0.17
POLB-206ENST00000519524 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
POLB-206ENST00000519524 C7P10643 843 aa16.03■□□□□ 0.16
POLB-206ENST00000519524 SLC39A7Q92504 469 aa16.03■□□□□ 0.16
POLB-206ENST00000519524 PAK3O75914 559 aaPredicted RBP16.01■□□□□ 0.15
POLB-206ENST00000519524 ASTLQ6HA08 431 aaPredicted RBP16.01■□□□□ 0.15
POLB-206ENST00000519524 SCUBE2Q9NQ36 999 aa15.95■□□□□ 0.14
POLB-206ENST00000519524 ATMINO43313 823 aaPredicted RBP15.94■□□□□ 0.14
POLB-206ENST00000519524 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
POLB-206ENST00000519524 ZBTB47Q9UFB7 747 aaPredicted RBP15.93■□□□□ 0.14
POLB-206ENST00000519524 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
POLB-206ENST00000519524 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
POLB-206ENST00000519524 CDAN1Q8IWY9 1227 aa15.92■□□□□ 0.14
POLB-206ENST00000519524 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
POLB-206ENST00000519524 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
POLB-206ENST00000519524 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
POLB-206ENST00000519524 RGL2O15211 777 aa15.88■□□□□ 0.13
POLB-206ENST00000519524 NUBP1P53384 320 aa15.88■□□□□ 0.13
POLB-206ENST00000519524 MS4A3Q96HJ5 214 aa15.85■□□□□ 0.13
POLB-206ENST00000519524 CIZ1Q9ULV3 898 aaPredicted RBP15.83■□□□□ 0.12
POLB-206ENST00000519524 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
POLB-206ENST00000519524 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
POLB-206ENST00000519524 ERCC6Q03468 1493 aa15.81■□□□□ 0.12
POLB-206ENST00000519524 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
POLB-206ENST00000519524 NESP48681 1621 aa15.79■□□□□ 0.12
POLB-206ENST00000519524 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
POLB-206ENST00000519524 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
POLB-206ENST00000519524 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
POLB-206ENST00000519524 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
POLB-206ENST00000519524 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
POLB-206ENST00000519524 CUX2O14529 1486 aa15.72■□□□□ 0.11
POLB-206ENST00000519524 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
POLB-206ENST00000519524 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
POLB-206ENST00000519524 GSE1Q14687 1217 aa15.69■□□□□ 0.1
POLB-206ENST00000519524 RNF25Q96BH1 459 aaPredicted RBP15.69■□□□□ 0.1
POLB-206ENST00000519524 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
POLB-206ENST00000519524 RASEFQ8IZ41 740 aa15.67■□□□□ 0.1
POLB-206ENST00000519524 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
POLB-206ENST00000519524 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
POLB-206ENST00000519524 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
POLB-206ENST00000519524 DCAF8Q5TAQ9 597 aa15.63■□□□□ 0.09
POLB-206ENST00000519524 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
POLB-206ENST00000519524 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
POLB-206ENST00000519524 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
POLB-206ENST00000519524 CHRM1P11229 460 aaPredicted RBP15.54■□□□□ 0.08
POLB-206ENST00000519524 WIZO95785 1651 aa15.54■□□□□ 0.08
POLB-206ENST00000519524 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
POLB-206ENST00000519524 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
POLB-206ENST00000519524 KIF21AQ7Z4S6 1674 aa15.52■□□□□ 0.08
POLB-206ENST00000519524 ST18O60284 1047 aa15.52■□□□□ 0.08
POLB-206ENST00000519524 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
POLB-206ENST00000519524 BMP2KQ9NSY1 1161 aaPredicted RBP15.51■□□□□ 0.07
POLB-206ENST00000519524 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
POLB-206ENST00000519524 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
POLB-206ENST00000519524 RIOK3O14730 519 aaKnown RBP15.47■□□□□ 0.07
POLB-206ENST00000519524 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
POLB-206ENST00000519524 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
POLB-206ENST00000519524 COLQQ9Y215 455 aaPredicted RBP15.46■□□□□ 0.07
POLB-206ENST00000519524 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
POLB-206ENST00000519524 PYGBP11216 843 aa15.41■□□□□ 0.06
POLB-206ENST00000519524 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
POLB-206ENST00000519524 TSPYL2Q9H2G4 693 aaPredicted RBP15.41■□□□□ 0.06
POLB-206ENST00000519524 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
POLB-206ENST00000519524 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
POLB-206ENST00000519524 SEC24BO95487 1268 aa15.4■□□□□ 0.06
POLB-206ENST00000519524 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
POLB-206ENST00000519524 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
POLB-206ENST00000519524 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
POLB-206ENST00000519524 TIE1P35590 1138 aa15.37■□□□□ 0.05
POLB-206ENST00000519524 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
POLB-206ENST00000519524 SPRYD3Q8NCJ5 442 aa15.37■□□□□ 0.05
POLB-206ENST00000519524 SLAIN1Q8ND83 568 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms