RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 METRNQ9UJH8 293 aa15.12■□□□□ 0.01
LAMA4-212ENST00000519245 POTEJP0CG39 1038 aa15.09■□□□□ 0.01
LAMA4-212ENST00000519245 SLC39A7Q92504 469 aa15.07■□□□□ 0
LAMA4-212ENST00000519245 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
LAMA4-212ENST00000519245 CCDC61Q9Y6R9 512 aa15.07■□□□□ 0
LAMA4-212ENST00000519245 POTEMA6NI47 508 aa15.05■□□□□ -0
LAMA4-212ENST00000519245 C7P10643 843 aa15.05■□□□□ -0
LAMA4-212ENST00000519245 POTEGQ6S5H5 508 aa15□□□□□ -0.01
LAMA4-212ENST00000519245 ATN1P54259 1190 aaPredicted RBP14.99□□□□□ -0.01
LAMA4-212ENST00000519245 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
LAMA4-212ENST00000519245 TRPC6Q9Y210 931 aa14.93□□□□□ -0.02
LAMA4-212ENST00000519245 BMP2KQ9NSY1 1161 aaPredicted RBP14.92□□□□□ -0.02
LAMA4-212ENST00000519245 MAMSTRQ6ZN01 415 aa14.91□□□□□ -0.02
LAMA4-212ENST00000519245 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
LAMA4-212ENST00000519245 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
LAMA4-212ENST00000519245 MAP3K13O43283 966 aa14.88□□□□□ -0.03
LAMA4-212ENST00000519245 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
LAMA4-212ENST00000519245 MIER1Q8N108 512 aa14.83□□□□□ -0.04
LAMA4-212ENST00000519245 TIE1P35590 1138 aa14.82□□□□□ -0.04
LAMA4-212ENST00000519245 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
LAMA4-212ENST00000519245 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
LAMA4-212ENST00000519245 PCDH10Q9P2E7 1040 aa14.77□□□□□ -0.05
LAMA4-212ENST00000519245 TTLL13PA6NNM8 815 aa14.76□□□□□ -0.05
LAMA4-212ENST00000519245 COLQQ9Y215 455 aaPredicted RBP14.75□□□□□ -0.05
LAMA4-212ENST00000519245 FAM163AQ96GL9 167 aaPredicted RBP14.74□□□□□ -0.05
LAMA4-212ENST00000519245 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
LAMA4-212ENST00000519245 NUBP1P53384 320 aa14.66□□□□□ -0.06
LAMA4-212ENST00000519245 SGIP1Q9BQI5 828 aa14.66□□□□□ -0.06
LAMA4-212ENST00000519245 SEC24BO95487 1268 aa14.65□□□□□ -0.06
LAMA4-212ENST00000519245 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
LAMA4-212ENST00000519245 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
LAMA4-212ENST00000519245 IER5LQ5T953 404 aa14.63□□□□□ -0.07
LAMA4-212ENST00000519245 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
LAMA4-212ENST00000519245 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
LAMA4-212ENST00000519245 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
LAMA4-212ENST00000519245 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
LAMA4-212ENST00000519245 SLAIN1Q8ND83 568 aa14.46□□□□□ -0.09
LAMA4-212ENST00000519245 IRX5P78411 483 aaPredicted RBP14.44□□□□□ -0.1
LAMA4-212ENST00000519245 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
LAMA4-212ENST00000519245 ST18O60284 1047 aa14.42□□□□□ -0.1
LAMA4-212ENST00000519245 PLCG2P16885 1265 aa14.42□□□□□ -0.1
LAMA4-212ENST00000519245 FKBP8Q14318 412 aa14.4□□□□□ -0.1
LAMA4-212ENST00000519245 PYGBP11216 843 aa14.35□□□□□ -0.11
LAMA4-212ENST00000519245 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
LAMA4-212ENST00000519245 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
LAMA4-212ENST00000519245 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
LAMA4-212ENST00000519245 PDCD7Q8N8D1 485 aaKnown RBP14.2□□□□□ -0.14
LAMA4-212ENST00000519245 TMEM121BQ9BXQ6 578 aaPredicted RBP14.2□□□□□ -0.14
LAMA4-212ENST00000519245 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
LAMA4-212ENST00000519245 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
LAMA4-212ENST00000519245 SNPHO15079 494 aa14.15□□□□□ -0.14
LAMA4-212ENST00000519245 MARVELD3Q96A59 401 aa14.14□□□□□ -0.15
LAMA4-212ENST00000519245 ZNF467Q7Z7K2 595 aaPredicted RBP14.11□□□□□ -0.15
LAMA4-212ENST00000519245 SPNS2Q8IVW8 549 aa14.11□□□□□ -0.15
LAMA4-212ENST00000519245 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
LAMA4-212ENST00000519245 GSE1Q14687 1217 aa14.09□□□□□ -0.15
LAMA4-212ENST00000519245 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
LAMA4-212ENST00000519245 CHRM1P11229 460 aaPredicted RBP14.06□□□□□ -0.16
LAMA4-212ENST00000519245 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
LAMA4-212ENST00000519245 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
LAMA4-212ENST00000519245 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
LAMA4-212ENST00000519245 GOLGA2Q08379 1002 aa14.03□□□□□ -0.16
LAMA4-212ENST00000519245 L3MBTL3Q96JM7 780 aaPredicted RBP14.02□□□□□ -0.17
LAMA4-212ENST00000519245 PSEN1P49768 467 aa14.01□□□□□ -0.17
LAMA4-212ENST00000519245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
LAMA4-212ENST00000519245 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
LAMA4-212ENST00000519245 EMP3P54852 163 aa13.98□□□□□ -0.17
LAMA4-212ENST00000519245 POTEB3A0JP26 581 aa13.97□□□□□ -0.17
LAMA4-212ENST00000519245 POTEBQ6S5H4 581 aa13.97□□□□□ -0.17
LAMA4-212ENST00000519245 DPY19L2Q6NUT2 758 aa13.93□□□□□ -0.18
LAMA4-212ENST00000519245 KRTAP3-3Q9BYR6 98 aa13.93□□□□□ -0.18
LAMA4-212ENST00000519245 KRTAP3-2Q9BYR7 98 aa13.93□□□□□ -0.18
LAMA4-212ENST00000519245 PDAP1Q13442 181 aaKnown RBP13.91□□□□□ -0.18
LAMA4-212ENST00000519245 HS3ST6Q96QI5 342 aa13.91□□□□□ -0.18
LAMA4-212ENST00000519245 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
LAMA4-212ENST00000519245 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
LAMA4-212ENST00000519245 HOXB3P14651 431 aaPredicted RBP13.84□□□□□ -0.19
LAMA4-212ENST00000519245 BOLA1Q9Y3E2 137 aa13.83□□□□□ -0.2
LAMA4-212ENST00000519245 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
LAMA4-212ENST00000519245 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
LAMA4-212ENST00000519245 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-212ENST00000519245 NISCHQ9Y2I1 1504 aa13.76□□□□□ -0.21
LAMA4-212ENST00000519245 G3V3G9 751 aa13.73□□□□□ -0.21
LAMA4-212ENST00000519245 HOXB1P14653 301 aaPredicted RBP13.71□□□□□ -0.21
LAMA4-212ENST00000519245 ZNF710Q8N1W2 664 aa13.67□□□□□ -0.22
LAMA4-212ENST00000519245 DOK7Q18PE1 504 aa13.66□□□□□ -0.22
LAMA4-212ENST00000519245 EFCAB3Q8N7B9 438 aa13.66□□□□□ -0.22
LAMA4-212ENST00000519245 ERBB3P21860 1342 aa13.63□□□□□ -0.23
LAMA4-212ENST00000519245 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
LAMA4-212ENST00000519245 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
LAMA4-212ENST00000519245 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
LAMA4-212ENST00000519245 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
LAMA4-212ENST00000519245 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
LAMA4-212ENST00000519245 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
LAMA4-212ENST00000519245 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-212ENST00000519245 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-212ENST00000519245 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
LAMA4-212ENST00000519245 GPR153Q6NV75 609 aa13.49□□□□□ -0.25
LAMA4-212ENST00000519245 SOX12O15370 315 aa13.47□□□□□ -0.25
LAMA4-212ENST00000519245 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms