RNA–Protein interactions for RNA: ENST00000518985.1

PCM1-211, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-211ENST00000518985 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
PCM1-211ENST00000518985 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
PCM1-211ENST00000518985 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
PCM1-211ENST00000518985 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
PCM1-211ENST00000518985 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
PCM1-211ENST00000518985 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
PCM1-211ENST00000518985 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
PCM1-211ENST00000518985 MROH2BQ7Z745 1585 aa13.08□□□□□ -0.32
PCM1-211ENST00000518985 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
PCM1-211ENST00000518985 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
PCM1-211ENST00000518985 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
PCM1-211ENST00000518985 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
PCM1-211ENST00000518985 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
PCM1-211ENST00000518985 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
PCM1-211ENST00000518985 TAOK2Q9UL54 1235 aa13.01□□□□□ -0.33
PCM1-211ENST00000518985 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
PCM1-211ENST00000518985 WIZO95785 1651 aa12.94□□□□□ -0.34
PCM1-211ENST00000518985 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
PCM1-211ENST00000518985 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
PCM1-211ENST00000518985 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
PCM1-211ENST00000518985 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
PCM1-211ENST00000518985 GSE1Q14687 1217 aa12.92□□□□□ -0.34
PCM1-211ENST00000518985 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
PCM1-211ENST00000518985 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
PCM1-211ENST00000518985 NUBP1P53384 320 aa12.88□□□□□ -0.35
PCM1-211ENST00000518985 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
PCM1-211ENST00000518985 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
PCM1-211ENST00000518985 NESP48681 1621 aa12.82□□□□□ -0.36
PCM1-211ENST00000518985 TPRNQ4KMQ1 711 aa12.8□□□□□ -0.36
PCM1-211ENST00000518985 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
PCM1-211ENST00000518985 RIOK3O14730 519 aaKnown RBP12.78□□□□□ -0.36
PCM1-211ENST00000518985 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
PCM1-211ENST00000518985 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
PCM1-211ENST00000518985 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
PCM1-211ENST00000518985 CREBZFQ9NS37 354 aa12.75□□□□□ -0.37
PCM1-211ENST00000518985 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
PCM1-211ENST00000518985 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
PCM1-211ENST00000518985 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
PCM1-211ENST00000518985 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
PCM1-211ENST00000518985 PRR29P0C7W0 189 aa12.7□□□□□ -0.38
PCM1-211ENST00000518985 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
PCM1-211ENST00000518985 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
PCM1-211ENST00000518985 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
PCM1-211ENST00000518985 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
PCM1-211ENST00000518985 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
PCM1-211ENST00000518985 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
PCM1-211ENST00000518985 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
PCM1-211ENST00000518985 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
PCM1-211ENST00000518985 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
PCM1-211ENST00000518985 STK25O00506 426 aa12.65□□□□□ -0.38
PCM1-211ENST00000518985 NBR1Q14596 966 aa12.65□□□□□ -0.38
PCM1-211ENST00000518985 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
PCM1-211ENST00000518985 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
PCM1-211ENST00000518985 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
PCM1-211ENST00000518985 CFTRP13569 1480 aa12.62□□□□□ -0.39
PCM1-211ENST00000518985 CUX2O14529 1486 aa12.6□□□□□ -0.39
PCM1-211ENST00000518985 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
PCM1-211ENST00000518985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
PCM1-211ENST00000518985 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
PCM1-211ENST00000518985 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
PCM1-211ENST00000518985 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
PCM1-211ENST00000518985 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
PCM1-211ENST00000518985 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
PCM1-211ENST00000518985 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
PCM1-211ENST00000518985 PYGBP11216 843 aa12.51□□□□□ -0.41
PCM1-211ENST00000518985 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
PCM1-211ENST00000518985 WDR62O43379 1518 aa12.51□□□□□ -0.41
PCM1-211ENST00000518985 CEP164Q9UPV0 1460 aa12.49□□□□□ -0.41
PCM1-211ENST00000518985 PITPNM1O00562 1244 aa12.49□□□□□ -0.41
PCM1-211ENST00000518985 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
PCM1-211ENST00000518985 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
PCM1-211ENST00000518985 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
PCM1-211ENST00000518985 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
PCM1-211ENST00000518985 TOPBP1Q92547 1522 aa12.36□□□□□ -0.43
PCM1-211ENST00000518985 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
PCM1-211ENST00000518985 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
PCM1-211ENST00000518985 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
PCM1-211ENST00000518985 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
PCM1-211ENST00000518985 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
PCM1-211ENST00000518985 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
PCM1-211ENST00000518985 POTEHQ6S545 545 aa12.27□□□□□ -0.45
PCM1-211ENST00000518985 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
PCM1-211ENST00000518985 CUX1P39880 1505 aa12.27□□□□□ -0.45
PCM1-211ENST00000518985 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.45
PCM1-211ENST00000518985 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
PCM1-211ENST00000518985 ZNF579Q8NAF0 562 aaKnown RBP12.26□□□□□ -0.45
PCM1-211ENST00000518985 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
PCM1-211ENST00000518985 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
PCM1-211ENST00000518985 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
PCM1-211ENST00000518985 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
PCM1-211ENST00000518985 KCNV2Q8TDN2 545 aa12.24□□□□□ -0.45
PCM1-211ENST00000518985 IFT140Q96RY7 1462 aa12.24□□□□□ -0.45
PCM1-211ENST00000518985 WDR70Q9NW82 654 aa12.24□□□□□ -0.45
PCM1-211ENST00000518985 PSEN1P49768 467 aa12.23□□□□□ -0.45
PCM1-211ENST00000518985 MFRPQ9BY79 579 aa12.23□□□□□ -0.45
PCM1-211ENST00000518985 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.46
PCM1-211ENST00000518985 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
PCM1-211ENST00000518985 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
PCM1-211ENST00000518985 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
PCM1-211ENST00000518985 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■□□□ 12.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms