RNA–Protein interactions for RNA: ENST00000517404.1

RMDN1-203, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2

Gene RMDN1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-203ENST00000517404 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
RMDN1-203ENST00000517404 ATMINO43313 823 aaPredicted RBP15.96■□□□□ 0.15
RMDN1-203ENST00000517404 STAG3Q9UJ98 1225 aa15.94■□□□□ 0.14
RMDN1-203ENST00000517404 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
RMDN1-203ENST00000517404 MNX1P50219 401 aaPredicted RBP15.87■□□□□ 0.13
RMDN1-203ENST00000517404 SCUBE2Q9NQ36 999 aa15.82■□□□□ 0.12
RMDN1-203ENST00000517404 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
RMDN1-203ENST00000517404 POTEFA5A3E0 1075 aa15.75■□□□□ 0.11
RMDN1-203ENST00000517404 ATN1P54259 1190 aaPredicted RBP15.75■□□□□ 0.11
RMDN1-203ENST00000517404 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
RMDN1-203ENST00000517404 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
RMDN1-203ENST00000517404 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
RMDN1-203ENST00000517404 TRPC6Q9Y210 931 aa15.54■□□□□ 0.08
RMDN1-203ENST00000517404 KIF12Q96FN5 646 aa15.53■□□□□ 0.08
RMDN1-203ENST00000517404 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
RMDN1-203ENST00000517404 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RMDN1-203ENST00000517404 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.08
RMDN1-203ENST00000517404 COLQQ9Y215 455 aaPredicted RBP15.51■□□□□ 0.07
RMDN1-203ENST00000517404 MMRN1Q13201 1228 aa15.45■□□□□ 0.06
RMDN1-203ENST00000517404 ST18O60284 1047 aa15.44■□□□□ 0.06
RMDN1-203ENST00000517404 TIE1P35590 1138 aa15.44■□□□□ 0.06
RMDN1-203ENST00000517404 SPNS2Q8IVW8 549 aa15.39■□□□□ 0.05
RMDN1-203ENST00000517404 MAP3K13O43283 966 aa15.37■□□□□ 0.05
RMDN1-203ENST00000517404 SEC24BO95487 1268 aa15.37■□□□□ 0.05
RMDN1-203ENST00000517404 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
RMDN1-203ENST00000517404 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
RMDN1-203ENST00000517404 IER5LQ5T953 404 aa15.27■□□□□ 0.04
RMDN1-203ENST00000517404 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
RMDN1-203ENST00000517404 TRIM35Q9UPQ4 493 aa15.23■□□□□ 0.03
RMDN1-203ENST00000517404 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
RMDN1-203ENST00000517404 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
RMDN1-203ENST00000517404 PROM2Q8N271 834 aa15.09■□□□□ 0.01
RMDN1-203ENST00000517404 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
RMDN1-203ENST00000517404 MARVELD3Q96A59 401 aa15.06■□□□□ 0
RMDN1-203ENST00000517404 PCDHB13Q9Y5F0 798 aa15.03■□□□□ -0
RMDN1-203ENST00000517404 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
RMDN1-203ENST00000517404 PLCG2P16885 1265 aa15.01□□□□□ -0.01
RMDN1-203ENST00000517404 SNPHO15079 494 aa14.98□□□□□ -0.01
RMDN1-203ENST00000517404 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
RMDN1-203ENST00000517404 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
RMDN1-203ENST00000517404 KRTAP3-3Q9BYR6 98 aa14.92□□□□□ -0.02
RMDN1-203ENST00000517404 KRTAP3-2Q9BYR7 98 aa14.92□□□□□ -0.02
RMDN1-203ENST00000517404 MIER1Q8N108 512 aa14.9□□□□□ -0.02
RMDN1-203ENST00000517404 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
RMDN1-203ENST00000517404 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
RMDN1-203ENST00000517404 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
RMDN1-203ENST00000517404 OCEL1Q9H607 264 aa14.88□□□□□ -0.03
RMDN1-203ENST00000517404 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.87□□□□□ -0.03
RMDN1-203ENST00000517404 EMP3P54852 163 aa14.82□□□□□ -0.04
RMDN1-203ENST00000517404 NUBP1P53384 320 aa14.8□□□□□ -0.04
RMDN1-203ENST00000517404 HS3ST6Q96QI5 342 aa14.8□□□□□ -0.04
RMDN1-203ENST00000517404 FAM205CA6NFA0 338 aa14.73□□□□□ -0.05
RMDN1-203ENST00000517404 PDCD7Q8N8D1 485 aaKnown RBP14.64□□□□□ -0.07
RMDN1-203ENST00000517404 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
RMDN1-203ENST00000517404 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
RMDN1-203ENST00000517404 C3orf67Q6ZVT6 689 aa14.59□□□□□ -0.07
RMDN1-203ENST00000517404 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
RMDN1-203ENST00000517404 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.09
RMDN1-203ENST00000517404 PCDHB8Q9UN66 801 aa14.52□□□□□ -0.09
RMDN1-203ENST00000517404 RNF166Q96A37 237 aaPredicted RBP14.51□□□□□ -0.09
RMDN1-203ENST00000517404 PYGBP11216 843 aa14.49□□□□□ -0.09
RMDN1-203ENST00000517404 HOXB3P14651 431 aaPredicted RBP14.44□□□□□ -0.1
RMDN1-203ENST00000517404 HOXB1P14653 301 aaPredicted RBP14.39□□□□□ -0.11
RMDN1-203ENST00000517404 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
RMDN1-203ENST00000517404 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
RMDN1-203ENST00000517404 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
RMDN1-203ENST00000517404 ILDR1Q86SU0 546 aaPredicted RBP14.35□□□□□ -0.11
RMDN1-203ENST00000517404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
RMDN1-203ENST00000517404 ERBB3P21860 1342 aa14.33□□□□□ -0.12
RMDN1-203ENST00000517404 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
RMDN1-203ENST00000517404 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
RMDN1-203ENST00000517404 ZNF710Q8N1W2 664 aa14.25□□□□□ -0.13
RMDN1-203ENST00000517404 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
RMDN1-203ENST00000517404 ZNF467Q7Z7K2 595 aaPredicted RBP14.23□□□□□ -0.13
RMDN1-203ENST00000517404 DOK7Q18PE1 504 aa14.2□□□□□ -0.14
RMDN1-203ENST00000517404 BOLA1Q9Y3E2 137 aa14.19□□□□□ -0.14
RMDN1-203ENST00000517404 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
RMDN1-203ENST00000517404 PSEN1P49768 467 aa14.17□□□□□ -0.14
RMDN1-203ENST00000517404 PTGER2P43116 358 aa14.15□□□□□ -0.14
RMDN1-203ENST00000517404 FKBP8Q14318 412 aa14.13□□□□□ -0.15
RMDN1-203ENST00000517404 CHRM1P11229 460 aaPredicted RBP14.1□□□□□ -0.15
RMDN1-203ENST00000517404 G3V3G9 751 aa14.08□□□□□ -0.16
RMDN1-203ENST00000517404 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
RMDN1-203ENST00000517404 GSE1Q14687 1217 aa14.03□□□□□ -0.16
RMDN1-203ENST00000517404 ZSWIM6Q9HCJ5 1215 aa14.03□□□□□ -0.16
RMDN1-203ENST00000517404 GPR153Q6NV75 609 aa14.02□□□□□ -0.17
RMDN1-203ENST00000517404 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
RMDN1-203ENST00000517404 CABP2Q9NPB3 220 aa13.99□□□□□ -0.17
RMDN1-203ENST00000517404 PDAP1Q13442 181 aaKnown RBP13.98□□□□□ -0.17
RMDN1-203ENST00000517404 PLA2G2EQ9NZK7 142 aa13.96□□□□□ -0.17
RMDN1-203ENST00000517404 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
RMDN1-203ENST00000517404 LSM11P83369 360 aaKnown RBP eCLIP13.89□□□□□ -0.19
RMDN1-203ENST00000517404 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
RMDN1-203ENST00000517404 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
RMDN1-203ENST00000517404 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
RMDN1-203ENST00000517404 MICALL2Q8IY33 904 aa13.8□□□□□ -0.2
RMDN1-203ENST00000517404 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
RMDN1-203ENST00000517404 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
RMDN1-203ENST00000517404 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.21
RMDN1-203ENST00000517404 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms