RNA–Protein interactions for RNA: ENST00000517280.1

RNU1-104P-201, Transcript of RNA, U1 small nuclear 104, pseudogene, humanhuman

BASIC

Gene RNU1-104P, Length 175 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-104P-201ENST00000517280 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
RNU1-104P-201ENST00000517280 NPM1P06748 294 aaKnown RBP eCLIP6.23□□□□□ -1.41
RNU1-104P-201ENST00000517280 METRNQ9UJH8 293 aa6.22□□□□□ -1.41
RNU1-104P-201ENST00000517280 CCDC61Q9Y6R9 512 aa6.22□□□□□ -1.41
RNU1-104P-201ENST00000517280 POTEMA6NI47 508 aa6.21□□□□□ -1.42
RNU1-104P-201ENST00000517280 POTEFA5A3E0 1075 aa6.2□□□□□ -1.42
RNU1-104P-201ENST00000517280 POTEGQ6S5H5 508 aa6.19□□□□□ -1.42
RNU1-104P-201ENST00000517280 SLC39A7Q92504 469 aa6.19□□□□□ -1.42
RNU1-104P-201ENST00000517280 C7P10643 843 aa6.18□□□□□ -1.42
RNU1-104P-201ENST00000517280 ATN1P54259 1190 aaPredicted RBP6.17□□□□□ -1.42
RNU1-104P-201ENST00000517280 TSPYL2Q9H2G4 693 aaPredicted RBP6.17□□□□□ -1.42
RNU1-104P-201ENST00000517280 TRPC6Q9Y210 931 aa6.17□□□□□ -1.42
RNU1-104P-201ENST00000517280 KIF12Q96FN5 646 aa6.16□□□□□ -1.42
RNU1-104P-201ENST00000517280 BMP2KQ9NSY1 1161 aaPredicted RBP6.15□□□□□ -1.42
RNU1-104P-201ENST00000517280 RASEFQ8IZ41 740 aa6.12□□□□□ -1.43
RNU1-104P-201ENST00000517280 TIE1P35590 1138 aa6.11□□□□□ -1.43
RNU1-104P-201ENST00000517280 MAMSTRQ6ZN01 415 aa6.1□□□□□ -1.43
RNU1-104P-201ENST00000517280 PCDH10Q9P2E7 1040 aa6.1□□□□□ -1.43
RNU1-104P-201ENST00000517280 MAP3K13O43283 966 aa6.09□□□□□ -1.43
RNU1-104P-201ENST00000517280 COLQQ9Y215 455 aaPredicted RBP6.08□□□□□ -1.44
RNU1-104P-201ENST00000517280 TTLL13PA6NNM8 815 aa6.07□□□□□ -1.44
RNU1-104P-201ENST00000517280 FAM163AQ96GL9 167 aaPredicted RBP6.07□□□□□ -1.44
RNU1-104P-201ENST00000517280 SCUBE2Q9NQ36 999 aa6.07□□□□□ -1.44
RNU1-104P-201ENST00000517280 NUBP1P53384 320 aa6.03□□□□□ -1.44
RNU1-104P-201ENST00000517280 SGIP1Q9BQI5 828 aa6.03□□□□□ -1.44
RNU1-104P-201ENST00000517280 IER5LQ5T953 404 aa6.02□□□□□ -1.45
RNU1-104P-201ENST00000517280 MIER1Q8N108 512 aa6.02□□□□□ -1.45
RNU1-104P-201ENST00000517280 TRIM35Q9UPQ4 493 aa6.01□□□□□ -1.45
RNU1-104P-201ENST00000517280 IFNL1Q8IU54 200 aa5.99□□□□□ -1.45
RNU1-104P-201ENST00000517280 PCDHB13Q9Y5F0 798 aa5.98□□□□□ -1.45
RNU1-104P-201ENST00000517280 SEC24BO95487 1268 aa5.96□□□□□ -1.46
RNU1-104P-201ENST00000517280 IRX5P78411 483 aaPredicted RBP5.96□□□□□ -1.46
RNU1-104P-201ENST00000517280 ST18O60284 1047 aa5.94□□□□□ -1.46
RNU1-104P-201ENST00000517280 PLEKHG5O94827 1062 aa5.94□□□□□ -1.46
RNU1-104P-201ENST00000517280 PLCD3Q8N3E9 789 aa5.94□□□□□ -1.46
RNU1-104P-201ENST00000517280 CDAN1Q8IWY9 1227 aa5.93□□□□□ -1.46
RNU1-104P-201ENST00000517280 TMEM106CQ9BVX2 250 aa5.92□□□□□ -1.46
RNU1-104P-201ENST00000517280 SLAIN1Q8ND83 568 aa5.9□□□□□ -1.46
RNU1-104P-201ENST00000517280 ZBTB47Q9UFB7 747 aaPredicted RBP5.9□□□□□ -1.46
RNU1-104P-201ENST00000517280 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
RNU1-104P-201ENST00000517280 PLCG2P16885 1265 aa5.88□□□□□ -1.47
RNU1-104P-201ENST00000517280 PDCD7Q8N8D1 485 aaKnown RBP5.87□□□□□ -1.47
RNU1-104P-201ENST00000517280 TMEM121BQ9BXQ6 578 aaPredicted RBP5.86□□□□□ -1.47
RNU1-104P-201ENST00000517280 OCEL1Q9H607 264 aa5.86□□□□□ -1.47
RNU1-104P-201ENST00000517280 PYGBP11216 843 aa5.85□□□□□ -1.47
RNU1-104P-201ENST00000517280 PCDHB8Q9UN66 801 aa5.84□□□□□ -1.47
RNU1-104P-201ENST00000517280 MMRN1Q13201 1228 aa5.83□□□□□ -1.48
RNU1-104P-201ENST00000517280 FKBP8Q14318 412 aa5.83□□□□□ -1.48
RNU1-104P-201ENST00000517280 ILDR1Q86SU0 546 aaPredicted RBP5.83□□□□□ -1.48
RNU1-104P-201ENST00000517280 SPNS2Q8IVW8 549 aa5.83□□□□□ -1.48
RNU1-104P-201ENST00000517280 DCAF8Q5TAQ9 597 aa5.82□□□□□ -1.48
RNU1-104P-201ENST00000517280 MARVELD3Q96A59 401 aa5.82□□□□□ -1.48
RNU1-104P-201ENST00000517280 POTEB3A0JP26 581 aa5.79□□□□□ -1.48
RNU1-104P-201ENST00000517280 POTEBQ6S5H4 581 aa5.79□□□□□ -1.48
RNU1-104P-201ENST00000517280 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.79□□□□□ -1.48
RNU1-104P-201ENST00000517280 KRTAP3-3Q9BYR6 98 aa5.78□□□□□ -1.48
RNU1-104P-201ENST00000517280 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
RNU1-104P-201ENST00000517280 SNPHO15079 494 aa5.77□□□□□ -1.49
RNU1-104P-201ENST00000517280 CHRM1P11229 460 aaPredicted RBP5.76□□□□□ -1.49
RNU1-104P-201ENST00000517280 FBXO3Q9UK99 471 aa5.76□□□□□ -1.49
RNU1-104P-201ENST00000517280 ZNF467Q7Z7K2 595 aaPredicted RBP5.75□□□□□ -1.49
RNU1-104P-201ENST00000517280 VASPP50552 380 aaPredicted RBP5.73□□□□□ -1.49
RNU1-104P-201ENST00000517280 HOXB3P14651 431 aaPredicted RBP5.72□□□□□ -1.49
RNU1-104P-201ENST00000517280 C3orf67Q6ZVT6 689 aa5.72□□□□□ -1.49
RNU1-104P-201ENST00000517280 HS3ST6Q96QI5 342 aa5.72□□□□□ -1.49
RNU1-104P-201ENST00000517280 PSEN1P49768 467 aa5.71□□□□□ -1.5
RNU1-104P-201ENST00000517280 EMP3P54852 163 aa5.71□□□□□ -1.5
RNU1-104P-201ENST00000517280 GSE1Q14687 1217 aa5.71□□□□□ -1.5
RNU1-104P-201ENST00000517280 L3MBTL3Q96JM7 780 aaPredicted RBP5.71□□□□□ -1.5
RNU1-104P-201ENST00000517280 DPY19L2Q6NUT2 758 aa5.7□□□□□ -1.5
RNU1-104P-201ENST00000517280 KLHL34Q8N239 644 aa5.7□□□□□ -1.5
RNU1-104P-201ENST00000517280 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU1-104P-201ENST00000517280 FAM205CA6NFA0 338 aa5.69□□□□□ -1.5
RNU1-104P-201ENST00000517280 MKRN3Q13064 507 aaKnown RBP5.69□□□□□ -1.5
RNU1-104P-201ENST00000517280 GOLGA2Q08379 1002 aa5.67□□□□□ -1.5
RNU1-104P-201ENST00000517280 PDAP1Q13442 181 aaKnown RBP5.67□□□□□ -1.5
RNU1-104P-201ENST00000517280 HOXB1P14653 301 aaPredicted RBP5.65□□□□□ -1.5
RNU1-104P-201ENST00000517280 BOLA1Q9Y3E2 137 aa5.65□□□□□ -1.5
RNU1-104P-201ENST00000517280 IFNLR1Q8IU57 520 aaPredicted RBP5.63□□□□□ -1.51
RNU1-104P-201ENST00000517280 CABP2Q9NPB3 220 aa5.63□□□□□ -1.51
RNU1-104P-201ENST00000517280 TMEM92Q6UXU6 159 aa5.62□□□□□ -1.51
RNU1-104P-201ENST00000517280 CIZ1Q9ULV3 898 aaPredicted RBP5.6□□□□□ -1.51
RNU1-104P-201ENST00000517280 SPOCK2Q92563 424 aa5.58□□□□□ -1.52
RNU1-104P-201ENST00000517280 DOK7Q18PE1 504 aa5.57□□□□□ -1.52
RNU1-104P-201ENST00000517280 MICALL2Q8IY33 904 aa5.57□□□□□ -1.52
RNU1-104P-201ENST00000517280 EFCAB3Q8N7B9 438 aa5.57□□□□□ -1.52
RNU1-104P-201ENST00000517280 MS4A4AQ96JQ5 239 aa5.57□□□□□ -1.52
RNU1-104P-201ENST00000517280 GPR153Q6NV75 609 aa5.56□□□□□ -1.52
RNU1-104P-201ENST00000517280 RNF25Q96BH1 459 aaPredicted RBP5.56□□□□□ -1.52
RNU1-104P-201ENST00000517280 ERBB3P21860 1342 aa5.55□□□□□ -1.52
RNU1-104P-201ENST00000517280 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
RNU1-104P-201ENST00000517280 RNF166Q96A37 237 aaPredicted RBP5.55□□□□□ -1.52
RNU1-104P-201ENST00000517280 ZSWIM6Q9HCJ5 1215 aa5.55□□□□□ -1.52
RNU1-104P-201ENST00000517280 G3V3G9 751 aa5.54□□□□□ -1.52
RNU1-104P-201ENST00000517280 VARS2Q5ST30 1063 aaKnown RBP5.54□□□□□ -1.52
RNU1-104P-201ENST00000517280 ZNF687Q8N1G0 1237 aa5.53□□□□□ -1.52
RNU1-104P-201ENST00000517280 TRIM41Q8WV44 630 aa5.52□□□□□ -1.53
RNU1-104P-201ENST00000517280 MYT1LQ9UL68 1186 aa5.5□□□□□ -1.53
RNU1-104P-201ENST00000517280 RIMBP2O15034 1052 aa5.49□□□□□ -1.53
RNU1-104P-201ENST00000517280 SOX12O15370 315 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms