RNA–Protein interactions for RNA: ENST00000516988.1

RN7SKP272-201, Transcript of RNA, 7SK small nuclear pseudogene 272, humanhuman

BASIC

Gene RN7SKP272, Length 232 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP272-201ENST00000516988 CHRM1P11229 460 aaPredicted RBP7.34□□□□□ -1.23
RN7SKP272-201ENST00000516988 CCDC61Q9Y6R9 512 aa7.34□□□□□ -1.23
RN7SKP272-201ENST00000516988 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
RN7SKP272-201ENST00000516988 ZRANB1Q9UGI0 708 aa7.32□□□□□ -1.24
RN7SKP272-201ENST00000516988 EVX2Q03828 476 aa7.31□□□□□ -1.24
RN7SKP272-201ENST00000516988 GABBR2O75899 941 aa7.26□□□□□ -1.25
RN7SKP272-201ENST00000516988 KIF12Q96FN5 646 aa7.26□□□□□ -1.25
RN7SKP272-201ENST00000516988 DCAF8Q5TAQ9 597 aa7.25□□□□□ -1.25
RN7SKP272-201ENST00000516988 TSPYL2Q9H2G4 693 aaPredicted RBP7.25□□□□□ -1.25
RN7SKP272-201ENST00000516988 ZNF467Q7Z7K2 595 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP272-201ENST00000516988 TIE1P35590 1138 aa7.19□□□□□ -1.26
RN7SKP272-201ENST00000516988 MAP3K13O43283 966 aa7.18□□□□□ -1.26
RN7SKP272-201ENST00000516988 PHF12Q96QT6 1004 aa7.18□□□□□ -1.26
RN7SKP272-201ENST00000516988 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
RN7SKP272-201ENST00000516988 ASTLQ6HA08 431 aaPredicted RBP7.16□□□□□ -1.26
RN7SKP272-201ENST00000516988 CIZ1Q9ULV3 898 aaPredicted RBP7.16□□□□□ -1.26
RN7SKP272-201ENST00000516988 PCDHB13Q9Y5F0 798 aa7.16□□□□□ -1.26
RN7SKP272-201ENST00000516988 GALR2O43603 387 aaPredicted RBP7.15□□□□□ -1.26
RN7SKP272-201ENST00000516988 MS4A3Q96HJ5 214 aa7.15□□□□□ -1.26
RN7SKP272-201ENST00000516988 PYGBP11216 843 aa7.13□□□□□ -1.27
RN7SKP272-201ENST00000516988 DCBLD2Q96PD2 775 aa7.13□□□□□ -1.27
RN7SKP272-201ENST00000516988 PKD2Q13563 968 aa7.12□□□□□ -1.27
RN7SKP272-201ENST00000516988 IFNL1Q8IU54 200 aa7.12□□□□□ -1.27
RN7SKP272-201ENST00000516988 AMER1Q5JTC6 1135 aaPredicted RBP7.11□□□□□ -1.27
RN7SKP272-201ENST00000516988 ATMINO43313 823 aaPredicted RBP7.09□□□□□ -1.27
RN7SKP272-201ENST00000516988 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
RN7SKP272-201ENST00000516988 IER5LQ5T953 404 aa7.09□□□□□ -1.27
RN7SKP272-201ENST00000516988 RIOK3O14730 519 aaKnown RBP7.08□□□□□ -1.28
RN7SKP272-201ENST00000516988 VGFO15240 615 aaPredicted RBP7.08□□□□□ -1.28
RN7SKP272-201ENST00000516988 ECM2O94769 699 aaPredicted RBP7.07□□□□□ -1.28
RN7SKP272-201ENST00000516988 POTEIP0CG38 1075 aa7.07□□□□□ -1.28
RN7SKP272-201ENST00000516988 C7P10643 843 aa7.07□□□□□ -1.28
RN7SKP272-201ENST00000516988 SLC39A7Q92504 469 aa7.07□□□□□ -1.28
RN7SKP272-201ENST00000516988 BMP2KQ9NSY1 1161 aaPredicted RBP7.07□□□□□ -1.28
RN7SKP272-201ENST00000516988 TTLL13PA6NNM8 815 aa7.06□□□□□ -1.28
RN7SKP272-201ENST00000516988 PSEN1P49768 467 aa7.04□□□□□ -1.28
RN7SKP272-201ENST00000516988 RNF25Q96BH1 459 aaPredicted RBP7.03□□□□□ -1.28
RN7SKP272-201ENST00000516988 DNAJC5Q9H3Z4 198 aa7.03□□□□□ -1.28
RN7SKP272-201ENST00000516988 PCDHB8Q9UN66 801 aa7.03□□□□□ -1.28
RN7SKP272-201ENST00000516988 ATN1P54259 1190 aaPredicted RBP7.02□□□□□ -1.29
RN7SKP272-201ENST00000516988 TMEM106CQ9BVX2 250 aa7.02□□□□□ -1.29
RN7SKP272-201ENST00000516988 ILDR1Q86SU0 546 aaPredicted RBP7.01□□□□□ -1.29
RN7SKP272-201ENST00000516988 TRPC6Q9Y210 931 aa7.01□□□□□ -1.29
RN7SKP272-201ENST00000516988 TRIM35Q9UPQ4 493 aa7□□□□□ -1.29
RN7SKP272-201ENST00000516988 SOX12O15370 315 aa6.98□□□□□ -1.29
RN7SKP272-201ENST00000516988 RGL2O15211 777 aa6.97□□□□□ -1.29
RN7SKP272-201ENST00000516988 PELP1Q8IZL8 1130 aaKnown RBP6.97□□□□□ -1.29
RN7SKP272-201ENST00000516988 IRX5P78411 483 aaPredicted RBP6.96□□□□□ -1.3
RN7SKP272-201ENST00000516988 METRNQ9UJH8 293 aa6.96□□□□□ -1.3
RN7SKP272-201ENST00000516988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 GOLGA2Q08379 1002 aa6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 MKRN3Q13064 507 aaKnown RBP6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 HS6ST3Q8IZP7 471 aa6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 ZFP91Q96JP5 570 aaPredicted RBP6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 OCEL1Q9H607 264 aa6.95□□□□□ -1.3
RN7SKP272-201ENST00000516988 MAMSTRQ6ZN01 415 aa6.93□□□□□ -1.3
RN7SKP272-201ENST00000516988 RYDENQ9NUL5 291 aaKnown RBP6.92□□□□□ -1.3
RN7SKP272-201ENST00000516988 POTEFA5A3E0 1075 aa6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 SEC24BO95487 1268 aa6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 PLCG2P16885 1265 aa6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 LHX8Q68G74 356 aa6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 BCL11BQ9C0K0 894 aaPredicted RBP6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
RN7SKP272-201ENST00000516988 NISCHQ9Y2I1 1504 aa6.9□□□□□ -1.31
RN7SKP272-201ENST00000516988 STK25O00506 426 aa6.89□□□□□ -1.31
RN7SKP272-201ENST00000516988 L3MBTL3Q96JM7 780 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP272-201ENST00000516988 RTN4Q9NQC3 1192 aaKnown RBP6.89□□□□□ -1.31
RN7SKP272-201ENST00000516988 NLRP6P59044 892 aa6.88□□□□□ -1.31
RN7SKP272-201ENST00000516988 PDCD7Q8N8D1 485 aaKnown RBP6.88□□□□□ -1.31
RN7SKP272-201ENST00000516988 EFCAB3Q8N7B9 438 aa6.87□□□□□ -1.31
RN7SKP272-201ENST00000516988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.87□□□□□ -1.31
RN7SKP272-201ENST00000516988 STK24Q9Y6E0 443 aa6.87□□□□□ -1.31
RN7SKP272-201ENST00000516988 COLQQ9Y215 455 aaPredicted RBP6.86□□□□□ -1.31
RN7SKP272-201ENST00000516988 TMEM121BQ9BXQ6 578 aaPredicted RBP6.85□□□□□ -1.31
RN7SKP272-201ENST00000516988 FBXO22Q8NEZ5 403 aa6.84□□□□□ -1.31
RN7SKP272-201ENST00000516988 SCUBE2Q9NQ36 999 aa6.83□□□□□ -1.32
RN7SKP272-201ENST00000516988 POTEB2H3BUK9 544 aa6.82□□□□□ -1.32
RN7SKP272-201ENST00000516988 CHGAP10645 457 aaKnown RBP6.82□□□□□ -1.32
RN7SKP272-201ENST00000516988 MFRPQ9BY79 579 aa6.82□□□□□ -1.32
RN7SKP272-201ENST00000516988 BBXQ8WY36 941 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP272-201ENST00000516988 MS4A4AQ96JQ5 239 aa6.79□□□□□ -1.32
RN7SKP272-201ENST00000516988 PHF8Q9UPP1 1060 aa6.79□□□□□ -1.32
RN7SKP272-201ENST00000516988 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
RN7SKP272-201ENST00000516988 POTEJP0CG39 1038 aa6.78□□□□□ -1.32
RN7SKP272-201ENST00000516988 OTUD5Q96G74 571 aa6.78□□□□□ -1.32
RN7SKP272-201ENST00000516988 G3V3G9 751 aa6.77□□□□□ -1.33
RN7SKP272-201ENST00000516988 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.77□□□□□ -1.33
RN7SKP272-201ENST00000516988 NKX1-1Q15270 411 aaPredicted RBP6.75□□□□□ -1.33
RN7SKP272-201ENST00000516988 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
RN7SKP272-201ENST00000516988 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.74□□□□□ -1.33
RN7SKP272-201ENST00000516988 GTPBP6O43824 516 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP272-201ENST00000516988 C3orf67Q6ZVT6 689 aa6.73□□□□□ -1.33
RN7SKP272-201ENST00000516988 SNPHO15079 494 aa6.72□□□□□ -1.33
RN7SKP272-201ENST00000516988 DPY19L2Q6NUT2 758 aa6.72□□□□□ -1.33
RN7SKP272-201ENST00000516988 DCAF8L2P0C7V8 631 aa6.71□□□□□ -1.34
RN7SKP272-201ENST00000516988 SPRYD3Q8NCJ5 442 aa6.69□□□□□ -1.34
RN7SKP272-201ENST00000516988 KIF3CO14782 793 aa6.68□□□□□ -1.34
RN7SKP272-201ENST00000516988 SLAIN1Q8ND83 568 aa6.67□□□□□ -1.34
RN7SKP272-201ENST00000516988 PPP1R37O75864 691 aa6.65□□□□□ -1.34
RN7SKP272-201ENST00000516988 ZSWIM6Q9HCJ5 1215 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms