RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SP7Q8TDD2 431 aaPredicted RBP4.07□□□□□ -1.76
SCARNA16.3-201ENST00000516595 BAZ1AQ9NRL2 1556 aaPredicted RBP4.06□□□□□ -1.76
SCARNA16.3-201ENST00000516595 GSE1Q14687 1217 aa4.06□□□□□ -1.76
SCARNA16.3-201ENST00000516595 EIF4G1Q04637 1599 aaKnown RBP4.06□□□□□ -1.76
SCARNA16.3-201ENST00000516595 NPM1P06748 294 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCARNA16.3-201ENST00000516595 CREBZFQ9NS37 354 aa4.05□□□□□ -1.76
SCARNA16.3-201ENST00000516595 CHADLQ6NUI6 762 aa4.04□□□□□ -1.76
SCARNA16.3-201ENST00000516595 SMARCA4P51532 1647 aa4.03□□□□□ -1.76
SCARNA16.3-201ENST00000516595 PEG3Q9GZU2 1588 aa4.03□□□□□ -1.76
SCARNA16.3-201ENST00000516595 FAM212AQ96EL1 285 aa4.03□□□□□ -1.76
SCARNA16.3-201ENST00000516595 CECR2Q9BXF3 1484 aa4.03□□□□□ -1.76
SCARNA16.3-201ENST00000516595 NUBP1P53384 320 aa4.02□□□□□ -1.77
SCARNA16.3-201ENST00000516595 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.02□□□□□ -1.77
SCARNA16.3-201ENST00000516595 RGL2O15211 777 aa4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 PRKAR2AP13861 404 aaKnown RBP4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 TRIM41Q8WV44 630 aa4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 TSPYL2Q9H2G4 693 aaPredicted RBP4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 SMARCA2P51531 1590 aa4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 MROH2BQ7Z745 1585 aa4.01□□□□□ -1.77
SCARNA16.3-201ENST00000516595 HMGXB3Q12766 1538 aa4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 NCAPD3P42695 1498 aa4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 ATAD2BQ9ULI0 1458 aa4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 CC2D2AQ9P2K1 1620 aa4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 CHGAP10645 457 aaKnown RBP4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 HAP1P54257 671 aaPredicted RBP4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 RSF1Q96T23 1441 aaPredicted RBP4□□□□□ -1.77
SCARNA16.3-201ENST00000516595 MNX1P50219 401 aaPredicted RBP3.99□□□□□ -1.77
SCARNA16.3-201ENST00000516595 RASEFQ8IZ41 740 aa3.99□□□□□ -1.77
SCARNA16.3-201ENST00000516595 CFAP44Q96MT7 982 aa3.99□□□□□ -1.77
SCARNA16.3-201ENST00000516595 TAOK2Q9UL54 1235 aa3.99□□□□□ -1.77
SCARNA16.3-201ENST00000516595 FARP1Q9Y4F1 1045 aaPredicted RBP3.99□□□□□ -1.77
SCARNA16.3-201ENST00000516595 PYGBP11216 843 aa3.98□□□□□ -1.77
SCARNA16.3-201ENST00000516595 CHRDL2Q6WN34 429 aa3.98□□□□□ -1.77
SCARNA16.3-201ENST00000516595 PAXIP1Q6ZW49 1069 aaPredicted RBP3.98□□□□□ -1.77
SCARNA16.3-201ENST00000516595 BBXQ8WY36 941 aaPredicted RBP3.98□□□□□ -1.77
SCARNA16.3-201ENST00000516595 PAK3O75914 559 aaPredicted RBP3.97□□□□□ -1.77
SCARNA16.3-201ENST00000516595 PLCB2Q00722 1185 aa3.97□□□□□ -1.77
SCARNA16.3-201ENST00000516595 RIOK3O14730 519 aaKnown RBP3.96□□□□□ -1.78
SCARNA16.3-201ENST00000516595 FXR2P51116 673 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCARNA16.3-201ENST00000516595 BAZ1BQ9UIG0 1483 aaKnown RBP3.96□□□□□ -1.78
SCARNA16.3-201ENST00000516595 TOP2AP11388 1531 aaKnown RBP3.95□□□□□ -1.78
SCARNA16.3-201ENST00000516595 SPRYD3Q8NCJ5 442 aa3.95□□□□□ -1.78
SCARNA16.3-201ENST00000516595 WIZO95785 1651 aa3.94□□□□□ -1.78
SCARNA16.3-201ENST00000516595 STK25O00506 426 aa3.94□□□□□ -1.78
SCARNA16.3-201ENST00000516595 PIP4P2Q8N4L2 257 aa3.94□□□□□ -1.78
SCARNA16.3-201ENST00000516595 CHRM1P11229 460 aaPredicted RBP3.93□□□□□ -1.78
SCARNA16.3-201ENST00000516595 VGFO15240 615 aaPredicted RBP3.92□□□□□ -1.78
SCARNA16.3-201ENST00000516595 RNF25Q96BH1 459 aaPredicted RBP3.92□□□□□ -1.78
SCARNA16.3-201ENST00000516595 STK24Q9Y6E0 443 aa3.92□□□□□ -1.78
SCARNA16.3-201ENST00000516595 ZNF467Q7Z7K2 595 aaPredicted RBP3.91□□□□□ -1.78
SCARNA16.3-201ENST00000516595 ZRANB1Q9UGI0 708 aa3.91□□□□□ -1.78
SCARNA16.3-201ENST00000516595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 CD44P16070 742 aaKnown RBP3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 HS6ST3Q8IZP7 471 aa3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 ZFP91Q96JP5 570 aaPredicted RBP3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 BCL11BQ9C0K0 894 aaPredicted RBP3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PCDHB8Q9UN66 801 aa3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PCDHB13Q9Y5F0 798 aa3.9□□□□□ -1.79
SCARNA16.3-201ENST00000516595 CCDC61Q9Y6R9 512 aa3.89□□□□□ -1.79
SCARNA16.3-201ENST00000516595 LAMC3Q9Y6N6 1575 aa3.89□□□□□ -1.79
SCARNA16.3-201ENST00000516595 CCDC88BA6NC98 1476 aa3.88□□□□□ -1.79
SCARNA16.3-201ENST00000516595 CFTRP13569 1480 aa3.88□□□□□ -1.79
SCARNA16.3-201ENST00000516595 VSIG10Q8N0Z9 540 aa3.88□□□□□ -1.79
SCARNA16.3-201ENST00000516595 CADPSQ9ULU8 1353 aa3.88□□□□□ -1.79
SCARNA16.3-201ENST00000516595 HAX1O00165 279 aa3.87□□□□□ -1.79
SCARNA16.3-201ENST00000516595 MAP3K13O43283 966 aa3.87□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PSEN1P49768 467 aa3.87□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PDAP1Q13442 181 aaKnown RBP3.87□□□□□ -1.79
SCARNA16.3-201ENST00000516595 SUPT5HO00267 1087 aaKnown RBP3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 GOLGA2Q08379 1002 aa3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 ZNF579Q8NAF0 562 aaKnown RBP3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 KIF12Q96FN5 646 aa3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 SGIP1Q9BQI5 828 aa3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 TSHZ2Q9NRE2 1034 aa3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 RYDENQ9NUL5 291 aaKnown RBP3.86□□□□□ -1.79
SCARNA16.3-201ENST00000516595 IFNL1Q8IU54 200 aa3.85□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PHF12Q96QT6 1004 aa3.85□□□□□ -1.79
SCARNA16.3-201ENST00000516595 PDS5BQ9NTI5 1447 aa3.85□□□□□ -1.79
SCARNA16.3-201ENST00000516595 GTPBP6O43824 516 aaPredicted RBP3.84□□□□□ -1.79
SCARNA16.3-201ENST00000516595 NKX1-1Q15270 411 aaPredicted RBP3.84□□□□□ -1.79
SCARNA16.3-201ENST00000516595 LHX8Q68G74 356 aa3.83□□□□□ -1.8
SCARNA16.3-201ENST00000516595 CABP2Q9NPB3 220 aa3.83□□□□□ -1.8
SCARNA16.3-201ENST00000516595 PRDM2Q13029 1718 aa3.83□□□□□ -1.8
SCARNA16.3-201ENST00000516595 NESP48681 1621 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 FANCD2Q9BXW9 1451 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 CEP164Q9UPV0 1460 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 C19orf67A6NJJ6 358 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 DNAJC5Q9H3Z4 198 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 KDM2AQ9Y2K7 1162 aa3.82□□□□□ -1.8
SCARNA16.3-201ENST00000516595 EFCAB3Q8N7B9 438 aa3.81□□□□□ -1.8
SCARNA16.3-201ENST00000516595 BCANQ96GW7 911 aa3.81□□□□□ -1.8
SCARNA16.3-201ENST00000516595 TMEM106CQ9BVX2 250 aa3.81□□□□□ -1.8
SCARNA16.3-201ENST00000516595 WDR70Q9NW82 654 aa3.81□□□□□ -1.8
SCARNA16.3-201ENST00000516595 SOX12O15370 315 aa3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 NLRP6P59044 892 aa3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 EVX2Q03828 476 aa3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 MKRN3Q13064 507 aaKnown RBP3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 ABCC8Q09428 1581 aa3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 THOC2Q8NI27 1593 aaKnown RBP3.8□□□□□ -1.8
SCARNA16.3-201ENST00000516595 WDR62O43379 1518 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms