RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
RN7SKP248-201ENST00000516278 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
RN7SKP248-201ENST00000516278 EVX2Q03828 476 aa12.49□□□□□ -0.41
RN7SKP248-201ENST00000516278 TRIM41Q8WV44 630 aa12.48□□□□□ -0.41
RN7SKP248-201ENST00000516278 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
RN7SKP248-201ENST00000516278 CHRM1P11229 460 aaPredicted RBP12.44□□□□□ -0.42
RN7SKP248-201ENST00000516278 PKD2Q13563 968 aa12.44□□□□□ -0.42
RN7SKP248-201ENST00000516278 CLCN6P51797 869 aa12.42□□□□□ -0.42
RN7SKP248-201ENST00000516278 PYGBP11216 843 aa12.4□□□□□ -0.42
RN7SKP248-201ENST00000516278 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
RN7SKP248-201ENST00000516278 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
RN7SKP248-201ENST00000516278 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
RN7SKP248-201ENST00000516278 KIF12Q96FN5 646 aa12.38□□□□□ -0.43
RN7SKP248-201ENST00000516278 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
RN7SKP248-201ENST00000516278 MAP3K13O43283 966 aa12.33□□□□□ -0.44
RN7SKP248-201ENST00000516278 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP248-201ENST00000516278 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
RN7SKP248-201ENST00000516278 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
RN7SKP248-201ENST00000516278 GABBR2O75899 941 aa12.28□□□□□ -0.44
RN7SKP248-201ENST00000516278 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
RN7SKP248-201ENST00000516278 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
RN7SKP248-201ENST00000516278 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
RN7SKP248-201ENST00000516278 RGL2O15211 777 aa12.23□□□□□ -0.45
RN7SKP248-201ENST00000516278 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
RN7SKP248-201ENST00000516278 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP248-201ENST00000516278 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
RN7SKP248-201ENST00000516278 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
RN7SKP248-201ENST00000516278 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
RN7SKP248-201ENST00000516278 PDAP1Q13442 181 aaKnown RBP12.17□□□□□ -0.46
RN7SKP248-201ENST00000516278 TIE1P35590 1138 aa12.14□□□□□ -0.47
RN7SKP248-201ENST00000516278 PSEN1P49768 467 aa12.13□□□□□ -0.47
RN7SKP248-201ENST00000516278 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
RN7SKP248-201ENST00000516278 TRPC6Q9Y210 931 aa12.12□□□□□ -0.47
RN7SKP248-201ENST00000516278 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
RN7SKP248-201ENST00000516278 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
RN7SKP248-201ENST00000516278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP248-201ENST00000516278 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP248-201ENST00000516278 BMP2KQ9NSY1 1161 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP248-201ENST00000516278 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
RN7SKP248-201ENST00000516278 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
RN7SKP248-201ENST00000516278 STK25O00506 426 aa12.04□□□□□ -0.48
RN7SKP248-201ENST00000516278 ATMINO43313 823 aaPredicted RBP12.04□□□□□ -0.48
RN7SKP248-201ENST00000516278 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.49
RN7SKP248-201ENST00000516278 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
RN7SKP248-201ENST00000516278 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
RN7SKP248-201ENST00000516278 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
RN7SKP248-201ENST00000516278 STK24Q9Y6E0 443 aa12□□□□□ -0.49
RN7SKP248-201ENST00000516278 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
RN7SKP248-201ENST00000516278 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
RN7SKP248-201ENST00000516278 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
RN7SKP248-201ENST00000516278 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
RN7SKP248-201ENST00000516278 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
RN7SKP248-201ENST00000516278 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
RN7SKP248-201ENST00000516278 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
RN7SKP248-201ENST00000516278 IER5LQ5T953 404 aa11.91□□□□□ -0.5
RN7SKP248-201ENST00000516278 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
RN7SKP248-201ENST00000516278 C7P10643 843 aa11.9□□□□□ -0.5
RN7SKP248-201ENST00000516278 SOX12O15370 315 aa11.89□□□□□ -0.51
RN7SKP248-201ENST00000516278 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
RN7SKP248-201ENST00000516278 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP248-201ENST00000516278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
RN7SKP248-201ENST00000516278 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
RN7SKP248-201ENST00000516278 SEC24BO95487 1268 aa11.82□□□□□ -0.52
RN7SKP248-201ENST00000516278 NLRP6P59044 892 aa11.82□□□□□ -0.52
RN7SKP248-201ENST00000516278 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP248-201ENST00000516278 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
RN7SKP248-201ENST00000516278 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP248-201ENST00000516278 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP248-201ENST00000516278 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
RN7SKP248-201ENST00000516278 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
RN7SKP248-201ENST00000516278 PLCG2P16885 1265 aa11.79□□□□□ -0.52
RN7SKP248-201ENST00000516278 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
RN7SKP248-201ENST00000516278 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
RN7SKP248-201ENST00000516278 NISCHQ9Y2I1 1504 aa11.79□□□□□ -0.52
RN7SKP248-201ENST00000516278 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
RN7SKP248-201ENST00000516278 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP248-201ENST00000516278 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
RN7SKP248-201ENST00000516278 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
RN7SKP248-201ENST00000516278 GTPBP6O43824 516 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP248-201ENST00000516278 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
RN7SKP248-201ENST00000516278 MS4A4AQ96JQ5 239 aa11.71□□□□□ -0.53
RN7SKP248-201ENST00000516278 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP248-201ENST00000516278 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
RN7SKP248-201ENST00000516278 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP248-201ENST00000516278 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
RN7SKP248-201ENST00000516278 G3V3G9 751 aa11.64□□□□□ -0.55
RN7SKP248-201ENST00000516278 POTEB2H3BUK9 544 aa11.62□□□□□ -0.55
RN7SKP248-201ENST00000516278 PPP1R37O75864 691 aa11.62□□□□□ -0.55
RN7SKP248-201ENST00000516278 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
RN7SKP248-201ENST00000516278 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
RN7SKP248-201ENST00000516278 LHX8Q68G74 356 aa11.59□□□□□ -0.55
RN7SKP248-201ENST00000516278 TMEM121BQ9BXQ6 578 aaPredicted RBP11.59□□□□□ -0.55
RN7SKP248-201ENST00000516278 MAMSTRQ6ZN01 415 aa11.58□□□□□ -0.56
RN7SKP248-201ENST00000516278 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
RN7SKP248-201ENST00000516278 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
RN7SKP248-201ENST00000516278 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
RN7SKP248-201ENST00000516278 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
RN7SKP248-201ENST00000516278 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
RN7SKP248-201ENST00000516278 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
RN7SKP248-201ENST00000516278 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms