RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
LINC00461-216ENST00000515885 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
LINC00461-216ENST00000515885 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
LINC00461-216ENST00000515885 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
LINC00461-216ENST00000515885 NACADO15069 1562 aa14.57□□□□□ -0.08
LINC00461-216ENST00000515885 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
LINC00461-216ENST00000515885 GSE1Q14687 1217 aa14.54□□□□□ -0.08
LINC00461-216ENST00000515885 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.09
LINC00461-216ENST00000515885 TULP1O00294 542 aaPredicted RBP14.5□□□□□ -0.09
LINC00461-216ENST00000515885 NUBP1P53384 320 aa14.5□□□□□ -0.09
LINC00461-216ENST00000515885 RIOK3O14730 519 aaKnown RBP14.47□□□□□ -0.09
LINC00461-216ENST00000515885 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
LINC00461-216ENST00000515885 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
LINC00461-216ENST00000515885 STK25O00506 426 aa14.39□□□□□ -0.11
LINC00461-216ENST00000515885 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
LINC00461-216ENST00000515885 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
LINC00461-216ENST00000515885 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
LINC00461-216ENST00000515885 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
LINC00461-216ENST00000515885 CHRM1P11229 460 aaPredicted RBP14.26□□□□□ -0.13
LINC00461-216ENST00000515885 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
LINC00461-216ENST00000515885 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
LINC00461-216ENST00000515885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
LINC00461-216ENST00000515885 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
LINC00461-216ENST00000515885 BCL11BQ9C0K0 894 aaPredicted RBP14.25□□□□□ -0.13
LINC00461-216ENST00000515885 STK24Q9Y6E0 443 aa14.25□□□□□ -0.13
LINC00461-216ENST00000515885 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
LINC00461-216ENST00000515885 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
LINC00461-216ENST00000515885 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
LINC00461-216ENST00000515885 ERICH6Q7L0X2 663 aa14.19□□□□□ -0.14
LINC00461-216ENST00000515885 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
LINC00461-216ENST00000515885 RYDENQ9NUL5 291 aaKnown RBP14.19□□□□□ -0.14
LINC00461-216ENST00000515885 P3H3Q8IVL6 736 aa14.17□□□□□ -0.14
LINC00461-216ENST00000515885 ARXQ96QS3 562 aa14.15□□□□□ -0.14
LINC00461-216ENST00000515885 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
LINC00461-216ENST00000515885 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
LINC00461-216ENST00000515885 PYGBP11216 843 aa14.11□□□□□ -0.15
LINC00461-216ENST00000515885 KCNV2Q8TDN2 545 aa14.11□□□□□ -0.15
LINC00461-216ENST00000515885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC00461-216ENST00000515885 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
LINC00461-216ENST00000515885 LMOD2Q6P5Q4 547 aa14.09□□□□□ -0.15
LINC00461-216ENST00000515885 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
LINC00461-216ENST00000515885 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
LINC00461-216ENST00000515885 EIF4G1Q04637 1599 aaKnown RBP14.06□□□□□ -0.16
LINC00461-216ENST00000515885 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
LINC00461-216ENST00000515885 WDR70Q9NW82 654 aa14.03□□□□□ -0.16
LINC00461-216ENST00000515885 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
LINC00461-216ENST00000515885 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
LINC00461-216ENST00000515885 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
LINC00461-216ENST00000515885 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
LINC00461-216ENST00000515885 BRPF1P55201 1214 aaPredicted RBP13.97□□□□□ -0.17
LINC00461-216ENST00000515885 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
LINC00461-216ENST00000515885 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
LINC00461-216ENST00000515885 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
LINC00461-216ENST00000515885 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
LINC00461-216ENST00000515885 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
LINC00461-216ENST00000515885 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
LINC00461-216ENST00000515885 MFRPQ9BY79 579 aa13.86□□□□□ -0.19
LINC00461-216ENST00000515885 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
LINC00461-216ENST00000515885 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
LINC00461-216ENST00000515885 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
LINC00461-216ENST00000515885 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
LINC00461-216ENST00000515885 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
LINC00461-216ENST00000515885 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
LINC00461-216ENST00000515885 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
LINC00461-216ENST00000515885 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
LINC00461-216ENST00000515885 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
LINC00461-216ENST00000515885 SLC24A3Q9HC58 644 aa13.79□□□□□ -0.2
LINC00461-216ENST00000515885 PPP1R37O75864 691 aa13.78□□□□□ -0.2
LINC00461-216ENST00000515885 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
LINC00461-216ENST00000515885 SEMA3EO15041 775 aa13.77□□□□□ -0.21
LINC00461-216ENST00000515885 E2F4Q16254 413 aa13.76□□□□□ -0.21
LINC00461-216ENST00000515885 CUX2O14529 1486 aa13.75□□□□□ -0.21
LINC00461-216ENST00000515885 PITPNM1O00562 1244 aa13.74□□□□□ -0.21
LINC00461-216ENST00000515885 PSEN1P49768 467 aa13.74□□□□□ -0.21
LINC00461-216ENST00000515885 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
LINC00461-216ENST00000515885 FBXO22Q8NEZ5 403 aa13.69□□□□□ -0.22
LINC00461-216ENST00000515885 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
LINC00461-216ENST00000515885 SUPT5HO00267 1087 aaKnown RBP13.67□□□□□ -0.22
LINC00461-216ENST00000515885 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
LINC00461-216ENST00000515885 ZMYND10O75800 440 aa13.66□□□□□ -0.22
LINC00461-216ENST00000515885 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.22
LINC00461-216ENST00000515885 EFCAB3Q8N7B9 438 aa13.64□□□□□ -0.23
LINC00461-216ENST00000515885 NLRP6P59044 892 aa13.62□□□□□ -0.23
LINC00461-216ENST00000515885 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
LINC00461-216ENST00000515885 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
LINC00461-216ENST00000515885 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
LINC00461-216ENST00000515885 SOX12O15370 315 aa13.58□□□□□ -0.24
LINC00461-216ENST00000515885 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
LINC00461-216ENST00000515885 BARGINQ6ZT62 677 aa13.56□□□□□ -0.24
LINC00461-216ENST00000515885 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
LINC00461-216ENST00000515885 SMYD5Q6GMV2 418 aa13.55□□□□□ -0.24
LINC00461-216ENST00000515885 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
LINC00461-216ENST00000515885 MFSD10Q14728 455 aa13.54□□□□□ -0.24
LINC00461-216ENST00000515885 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
LINC00461-216ENST00000515885 PDE4AP27815 886 aa13.5□□□□□ -0.25
LINC00461-216ENST00000515885 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
LINC00461-216ENST00000515885 MAP3K13O43283 966 aa13.47□□□□□ -0.25
LINC00461-216ENST00000515885 MS4A4AQ96JQ5 239 aa13.47□□□□□ -0.25
LINC00461-216ENST00000515885 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
LINC00461-216ENST00000515885 CAMK2BQ13554 666 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms