RNA–Protein interactions for RNA: ENST00000515768.5

CSNK1A1-207, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CSNK1A1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-207ENST00000515768 PKD2Q13563 968 aa16.92■□□□□ 0.3
CSNK1A1-207ENST00000515768 PAK3O75914 559 aaPredicted RBP16.9■□□□□ 0.3
CSNK1A1-207ENST00000515768 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
CSNK1A1-207ENST00000515768 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
CSNK1A1-207ENST00000515768 EVX2Q03828 476 aa16.83■□□□□ 0.28
CSNK1A1-207ENST00000515768 ECM2O94769 699 aaPredicted RBP16.78■□□□□ 0.28
CSNK1A1-207ENST00000515768 PYGBP11216 843 aa16.77■□□□□ 0.28
CSNK1A1-207ENST00000515768 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
CSNK1A1-207ENST00000515768 ZNF579Q8NAF0 562 aaKnown RBP16.73■□□□□ 0.27
CSNK1A1-207ENST00000515768 PHF12Q96QT6 1004 aa16.73■□□□□ 0.27
CSNK1A1-207ENST00000515768 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
CSNK1A1-207ENST00000515768 KIF12Q96FN5 646 aa16.67■□□□□ 0.26
CSNK1A1-207ENST00000515768 RGL2O15211 777 aa16.64■□□□□ 0.25
CSNK1A1-207ENST00000515768 MAP3K13O43283 966 aa16.64■□□□□ 0.25
CSNK1A1-207ENST00000515768 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
CSNK1A1-207ENST00000515768 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
CSNK1A1-207ENST00000515768 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
CSNK1A1-207ENST00000515768 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
CSNK1A1-207ENST00000515768 PCDHB8Q9UN66 801 aa16.54■□□□□ 0.24
CSNK1A1-207ENST00000515768 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
CSNK1A1-207ENST00000515768 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
CSNK1A1-207ENST00000515768 ZNF467Q7Z7K2 595 aaPredicted RBP16.52■□□□□ 0.24
CSNK1A1-207ENST00000515768 CLCN6P51797 869 aa16.49■□□□□ 0.23
CSNK1A1-207ENST00000515768 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
CSNK1A1-207ENST00000515768 GABBR2O75899 941 aa16.48■□□□□ 0.23
CSNK1A1-207ENST00000515768 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
CSNK1A1-207ENST00000515768 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
CSNK1A1-207ENST00000515768 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
CSNK1A1-207ENST00000515768 TRPC6Q9Y210 931 aa16.41■□□□□ 0.22
CSNK1A1-207ENST00000515768 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
CSNK1A1-207ENST00000515768 PDAP1Q13442 181 aaKnown RBP16.38■□□□□ 0.21
CSNK1A1-207ENST00000515768 PSEN1P49768 467 aa16.37■□□□□ 0.21
CSNK1A1-207ENST00000515768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
CSNK1A1-207ENST00000515768 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
CSNK1A1-207ENST00000515768 CHGAP10645 457 aaKnown RBP16.3■□□□□ 0.2
CSNK1A1-207ENST00000515768 TIE1P35590 1138 aa16.29■□□□□ 0.2
CSNK1A1-207ENST00000515768 STK25O00506 426 aa16.28■□□□□ 0.2
CSNK1A1-207ENST00000515768 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
CSNK1A1-207ENST00000515768 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.2
CSNK1A1-207ENST00000515768 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
CSNK1A1-207ENST00000515768 HS6ST3Q8IZP7 471 aa16.26■□□□□ 0.19
CSNK1A1-207ENST00000515768 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
CSNK1A1-207ENST00000515768 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
CSNK1A1-207ENST00000515768 DCBLD2Q96PD2 775 aa16.22■□□□□ 0.19
CSNK1A1-207ENST00000515768 ATMINO43313 823 aaPredicted RBP16.2■□□□□ 0.18
CSNK1A1-207ENST00000515768 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
CSNK1A1-207ENST00000515768 ATN1P54259 1190 aaPredicted RBP16.17■□□□□ 0.18
CSNK1A1-207ENST00000515768 CABP2Q9NPB3 220 aa16.17■□□□□ 0.18
CSNK1A1-207ENST00000515768 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
CSNK1A1-207ENST00000515768 TRIM35Q9UPQ4 493 aa16.14■□□□□ 0.17
CSNK1A1-207ENST00000515768 DNAJC5Q9H3Z4 198 aa16.11■□□□□ 0.17
CSNK1A1-207ENST00000515768 BBXQ8WY36 941 aaPredicted RBP16.1■□□□□ 0.17
CSNK1A1-207ENST00000515768 PELP1Q8IZL8 1130 aaKnown RBP16.09■□□□□ 0.17
CSNK1A1-207ENST00000515768 EFCAB3Q8N7B9 438 aa16.09■□□□□ 0.17
CSNK1A1-207ENST00000515768 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
CSNK1A1-207ENST00000515768 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-207ENST00000515768 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
CSNK1A1-207ENST00000515768 SOX12O15370 315 aa15.99■□□□□ 0.15
CSNK1A1-207ENST00000515768 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.98■□□□□ 0.15
CSNK1A1-207ENST00000515768 MFRPQ9BY79 579 aa15.97■□□□□ 0.15
CSNK1A1-207ENST00000515768 IER5LQ5T953 404 aa15.96■□□□□ 0.15
CSNK1A1-207ENST00000515768 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
CSNK1A1-207ENST00000515768 SLC39A7Q92504 469 aa15.95■□□□□ 0.14
CSNK1A1-207ENST00000515768 C7P10643 843 aa15.92■□□□□ 0.14
CSNK1A1-207ENST00000515768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.144e-10■■■□□ 17.2
CSNK1A1-207ENST00000515768 GTPBP6O43824 516 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-207ENST00000515768 NLRP6P59044 892 aa15.91■□□□□ 0.14
CSNK1A1-207ENST00000515768 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
CSNK1A1-207ENST00000515768 FBXO22Q8NEZ5 403 aa15.91■□□□□ 0.14
CSNK1A1-207ENST00000515768 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
CSNK1A1-207ENST00000515768 METRNQ9UJH8 293 aa15.9■□□□□ 0.14
CSNK1A1-207ENST00000515768 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
CSNK1A1-207ENST00000515768 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
CSNK1A1-207ENST00000515768 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
CSNK1A1-207ENST00000515768 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
CSNK1A1-207ENST00000515768 OCEL1Q9H607 264 aa15.87■□□□□ 0.13
CSNK1A1-207ENST00000515768 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
CSNK1A1-207ENST00000515768 POTEFA5A3E0 1075 aa15.86■□□□□ 0.13
CSNK1A1-207ENST00000515768 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
CSNK1A1-207ENST00000515768 SEC24BO95487 1268 aa15.85■□□□□ 0.13
CSNK1A1-207ENST00000515768 PDCD7Q8N8D1 485 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-207ENST00000515768 RYDENQ9NUL5 291 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-207ENST00000515768 PLCG2P16885 1265 aa15.83■□□□□ 0.12
CSNK1A1-207ENST00000515768 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
CSNK1A1-207ENST00000515768 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
CSNK1A1-207ENST00000515768 PPP1R37O75864 691 aa15.77■□□□□ 0.12
CSNK1A1-207ENST00000515768 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
CSNK1A1-207ENST00000515768 L3MBTL3Q96JM7 780 aaPredicted RBP15.65■□□□□ 0.1
CSNK1A1-207ENST00000515768 BOLA1Q9Y3E2 137 aa15.64■□□□□ 0.09
CSNK1A1-207ENST00000515768 MICALL2Q8IY33 904 aa15.61■□□□□ 0.09
CSNK1A1-207ENST00000515768 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
CSNK1A1-207ENST00000515768 TMEM121BQ9BXQ6 578 aaPredicted RBP15.6■□□□□ 0.09
CSNK1A1-207ENST00000515768 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
CSNK1A1-207ENST00000515768 G3V3G9 751 aa15.59■□□□□ 0.09
CSNK1A1-207ENST00000515768 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
CSNK1A1-207ENST00000515768 CADPS2Q86UW7 1296 aa15.52■□□□□ 0.08
CSNK1A1-207ENST00000515768 LHX8Q68G74 356 aa15.48■□□□□ 0.07
CSNK1A1-207ENST00000515768 C3orf67Q6ZVT6 689 aa15.47■□□□□ 0.07
CSNK1A1-207ENST00000515768 MAMSTRQ6ZN01 415 aa15.43■□□□□ 0.06
CSNK1A1-207ENST00000515768 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms