RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ZBTB7CA1YPR0 619 aa21.41■■□□□ 1.02
TRIM41-207ENST00000515223 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
TRIM41-207ENST00000515223 HAP1P54257 671 aaPredicted RBP21.4■■□□□ 1.02
TRIM41-207ENST00000515223 NBR1Q14596 966 aa21.39■■□□□ 1.01
TRIM41-207ENST00000515223 ARID4BQ4LE39 1312 aaPredicted RBP21.39■■□□□ 1.01
TRIM41-207ENST00000515223 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
TRIM41-207ENST00000515223 PLEKHG5O94827 1062 aa21.36■■□□□ 1.01
TRIM41-207ENST00000515223 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
TRIM41-207ENST00000515223 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
TRIM41-207ENST00000515223 SUPT16HQ9Y5B9 1047 aaKnown RBP21.3■■□□□ 1
TRIM41-207ENST00000515223 GOLGA3Q08378 1498 aa21.29■■□□□ 1
TRIM41-207ENST00000515223 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
TRIM41-207ENST00000515223 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
TRIM41-207ENST00000515223 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
TRIM41-207ENST00000515223 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
TRIM41-207ENST00000515223 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
TRIM41-207ENST00000515223 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
TRIM41-207ENST00000515223 RRP7BPQ9NSQ0 103 aa21.17■□□□□ 0.98
TRIM41-207ENST00000515223 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
TRIM41-207ENST00000515223 CFAP53Q96M91 514 aa21.16■□□□□ 0.98
TRIM41-207ENST00000515223 EIF4G2P78344 907 aaKnown RBP eCLIP21.16■□□□□ 0.98
TRIM41-207ENST00000515223 ARXQ96QS3 562 aa21.16■□□□□ 0.98
TRIM41-207ENST00000515223 CDCA8Q53HL2 280 aa21.14■□□□□ 0.97
TRIM41-207ENST00000515223 EEA1Q15075 1411 aa21.14■□□□□ 0.97
TRIM41-207ENST00000515223 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
TRIM41-207ENST00000515223 CFDP1Q9UEE9 299 aaPredicted RBP21.11■□□□□ 0.97
TRIM41-207ENST00000515223 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
TRIM41-207ENST00000515223 LMOD2Q6P5Q4 547 aa21.08■□□□□ 0.97
TRIM41-207ENST00000515223 SOGA1O94964 1423 aa21.06■□□□□ 0.96
TRIM41-207ENST00000515223 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.964e-9■■□□□ 14.1
TRIM41-207ENST00000515223 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
TRIM41-207ENST00000515223 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
TRIM41-207ENST00000515223 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
TRIM41-207ENST00000515223 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
TRIM41-207ENST00000515223 NPHP1O15259 732 aa21.02■□□□□ 0.96
TRIM41-207ENST00000515223 POGKQ9P215 609 aa21.02■□□□□ 0.96
TRIM41-207ENST00000515223 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
TRIM41-207ENST00000515223 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
TRIM41-207ENST00000515223 KNSTRNQ9Y448 316 aa21.01■□□□□ 0.95
TRIM41-207ENST00000515223 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
TRIM41-207ENST00000515223 NUDCQ9Y266 331 aa20.95■□□□□ 0.95
TRIM41-207ENST00000515223 HDGFP51858 240 aaKnown RBP20.94■□□□□ 0.94
TRIM41-207ENST00000515223 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
TRIM41-207ENST00000515223 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
TRIM41-207ENST00000515223 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
TRIM41-207ENST00000515223 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.93
TRIM41-207ENST00000515223 CASC1Q6TDU7 716 aa20.89■□□□□ 0.93
TRIM41-207ENST00000515223 TSHZ2Q9NRE2 1034 aa20.89■□□□□ 0.93
TRIM41-207ENST00000515223 BECN1Q14457 450 aa20.88■□□□□ 0.93
TRIM41-207ENST00000515223 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
TRIM41-207ENST00000515223 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
TRIM41-207ENST00000515223 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
TRIM41-207ENST00000515223 FTSJ3Q8IY81 847 aaKnown RBP20.87■□□□□ 0.93
TRIM41-207ENST00000515223 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
TRIM41-207ENST00000515223 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
TRIM41-207ENST00000515223 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
TRIM41-207ENST00000515223 B4GALNT3Q6L9W6 998 aa20.83■□□□□ 0.93
TRIM41-207ENST00000515223 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
TRIM41-207ENST00000515223 PPP4R2Q9NY27 417 aa20.81■□□□□ 0.92
TRIM41-207ENST00000515223 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
TRIM41-207ENST00000515223 MLECQ14165 292 aa20.81■□□□□ 0.92
TRIM41-207ENST00000515223 KANK1Q14678 1352 aa20.8■□□□□ 0.92
TRIM41-207ENST00000515223 NEUROD2Q15784 382 aa20.8■□□□□ 0.92
TRIM41-207ENST00000515223 PNNQ9H307 717 aaKnown RBP20.79■□□□□ 0.92
TRIM41-207ENST00000515223 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
TRIM41-207ENST00000515223 KANK4Q5T7N3 995 aaPredicted RBP20.78■□□□□ 0.92
TRIM41-207ENST00000515223 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
TRIM41-207ENST00000515223 GOLGA2Q08379 1002 aa20.77■□□□□ 0.92
TRIM41-207ENST00000515223 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
TRIM41-207ENST00000515223 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.91
TRIM41-207ENST00000515223 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.91
TRIM41-207ENST00000515223 NOP58Q9Y2X3 529 aaKnown RBP20.76■□□□□ 0.91
TRIM41-207ENST00000515223 TULP1O00294 542 aaPredicted RBP20.75■□□□□ 0.91
TRIM41-207ENST00000515223 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
TRIM41-207ENST00000515223 NACADO15069 1562 aa20.74■□□□□ 0.91
TRIM41-207ENST00000515223 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
TRIM41-207ENST00000515223 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
TRIM41-207ENST00000515223 MS4A1P11836 297 aa20.7■□□□□ 0.9
TRIM41-207ENST00000515223 FGD1P98174 961 aa20.69■□□□□ 0.9
TRIM41-207ENST00000515223 DEKP35659 375 aaKnown RBP20.68■□□□□ 0.9
TRIM41-207ENST00000515223 GLIPR1L2Q4G1C9 344 aa20.67■□□□□ 0.9
TRIM41-207ENST00000515223 CCER2I3L3R5 266 aa20.67■□□□□ 0.9
TRIM41-207ENST00000515223 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
TRIM41-207ENST00000515223 WIZO95785 1651 aa20.66■□□□□ 0.9
TRIM41-207ENST00000515223 TRIM44Q96DX7 344 aaPredicted RBP20.65■□□□□ 0.9
TRIM41-207ENST00000515223 TMF1P82094 1093 aa20.65■□□□□ 0.9
TRIM41-207ENST00000515223 SOX12O15370 315 aa20.63■□□□□ 0.89
TRIM41-207ENST00000515223 KCNJ4P48050 445 aa20.63■□□□□ 0.89
TRIM41-207ENST00000515223 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
TRIM41-207ENST00000515223 SETD5Q9C0A6 1442 aa20.62■□□□□ 0.89
TRIM41-207ENST00000515223 GGT6Q6P531 493 aa20.62■□□□□ 0.89
TRIM41-207ENST00000515223 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
TRIM41-207ENST00000515223 PTMAP06454 111 aaKnown RBP20.59■□□□□ 0.89
TRIM41-207ENST00000515223 DCAF11Q8TEB1 546 aa20.59■□□□□ 0.89
TRIM41-207ENST00000515223 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.89
TRIM41-207ENST00000515223 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.89
TRIM41-207ENST00000515223 TAOK2Q9UL54 1235 aa20.58■□□□□ 0.89
TRIM41-207ENST00000515223 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
TRIM41-207ENST00000515223 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
TRIM41-207ENST00000515223 NAP1L2Q9ULW6 460 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms