RNA–Protein interactions for RNA: ENST00000513993.5

SLC38A9-220, Transcript of solute carrier family 38 member 9, humanhuman

TSL 4

Gene SLC38A9, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-220ENST00000513993 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
SLC38A9-220ENST00000513993 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
SLC38A9-220ENST00000513993 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
SLC38A9-220ENST00000513993 CFAP44Q96MT7 982 aa14.69□□□□□ -0.06
SLC38A9-220ENST00000513993 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
SLC38A9-220ENST00000513993 PYGBP11216 843 aa14.58□□□□□ -0.08
SLC38A9-220ENST00000513993 HS6ST3Q8IZP7 471 aa14.57□□□□□ -0.08
SLC38A9-220ENST00000513993 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
SLC38A9-220ENST00000513993 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
SLC38A9-220ENST00000513993 PRKAR2AP13861 404 aaKnown RBP14.55□□□□□ -0.08
SLC38A9-220ENST00000513993 CHRM1P11229 460 aaPredicted RBP14.54□□□□□ -0.08
SLC38A9-220ENST00000513993 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
SLC38A9-220ENST00000513993 VSIG10Q8N0Z9 540 aa14.5□□□□□ -0.09
SLC38A9-220ENST00000513993 TAOK2Q9UL54 1235 aa14.5□□□□□ -0.09
SLC38A9-220ENST00000513993 STK25O00506 426 aa14.48□□□□□ -0.09
SLC38A9-220ENST00000513993 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
SLC38A9-220ENST00000513993 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
SLC38A9-220ENST00000513993 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
SLC38A9-220ENST00000513993 KDM2AQ9Y2K7 1162 aa14.45□□□□□ -0.1
SLC38A9-220ENST00000513993 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
SLC38A9-220ENST00000513993 NKX1-1Q15270 411 aaPredicted RBP14.43□□□□□ -0.1
SLC38A9-220ENST00000513993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
SLC38A9-220ENST00000513993 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
SLC38A9-220ENST00000513993 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
SLC38A9-220ENST00000513993 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
SLC38A9-220ENST00000513993 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
SLC38A9-220ENST00000513993 STK24Q9Y6E0 443 aa14.39□□□□□ -0.11
SLC38A9-220ENST00000513993 SGIP1Q9BQI5 828 aa14.35□□□□□ -0.11
SLC38A9-220ENST00000513993 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
SLC38A9-220ENST00000513993 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
SLC38A9-220ENST00000513993 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
SLC38A9-220ENST00000513993 PCDHB13Q9Y5F0 798 aa14.32□□□□□ -0.12
SLC38A9-220ENST00000513993 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
SLC38A9-220ENST00000513993 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
SLC38A9-220ENST00000513993 BCANQ96GW7 911 aa14.24□□□□□ -0.13
SLC38A9-220ENST00000513993 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
SLC38A9-220ENST00000513993 MAP3K13O43283 966 aa14.19□□□□□ -0.14
SLC38A9-220ENST00000513993 PSEN1P49768 467 aa14.19□□□□□ -0.14
SLC38A9-220ENST00000513993 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
SLC38A9-220ENST00000513993 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
SLC38A9-220ENST00000513993 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
SLC38A9-220ENST00000513993 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
SLC38A9-220ENST00000513993 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
SLC38A9-220ENST00000513993 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
SLC38A9-220ENST00000513993 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
SLC38A9-220ENST00000513993 MFRPQ9BY79 579 aa14.04□□□□□ -0.16
SLC38A9-220ENST00000513993 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
SLC38A9-220ENST00000513993 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
SLC38A9-220ENST00000513993 PRKCSHP14314 528 aaPredicted RBP13.98□□□□□ -0.17
SLC38A9-220ENST00000513993 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
SLC38A9-220ENST00000513993 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
SLC38A9-220ENST00000513993 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
SLC38A9-220ENST00000513993 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
SLC38A9-220ENST00000513993 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
SLC38A9-220ENST00000513993 PPP1R37O75864 691 aa13.93□□□□□ -0.18
SLC38A9-220ENST00000513993 NBR1Q14596 966 aa13.92□□□□□ -0.18
SLC38A9-220ENST00000513993 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
SLC38A9-220ENST00000513993 SOX12O15370 315 aa13.9□□□□□ -0.18
SLC38A9-220ENST00000513993 NLRP6P59044 892 aa13.9□□□□□ -0.18
SLC38A9-220ENST00000513993 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
SLC38A9-220ENST00000513993 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
SLC38A9-220ENST00000513993 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
SLC38A9-220ENST00000513993 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
SLC38A9-220ENST00000513993 HAX1O00165 279 aa13.81□□□□□ -0.2
SLC38A9-220ENST00000513993 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
SLC38A9-220ENST00000513993 EVX2Q03828 476 aa13.78□□□□□ -0.2
SLC38A9-220ENST00000513993 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
SLC38A9-220ENST00000513993 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
SLC38A9-220ENST00000513993 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
SLC38A9-220ENST00000513993 TIE1P35590 1138 aa13.74□□□□□ -0.21
SLC38A9-220ENST00000513993 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
SLC38A9-220ENST00000513993 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
SLC38A9-220ENST00000513993 KCNV2Q8TDN2 545 aa13.72□□□□□ -0.21
SLC38A9-220ENST00000513993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
SLC38A9-220ENST00000513993 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
SLC38A9-220ENST00000513993 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
SLC38A9-220ENST00000513993 LARP6Q9BRS8 491 aaKnown RBP13.63□□□□□ -0.23
SLC38A9-220ENST00000513993 E2F4Q16254 413 aa13.6□□□□□ -0.23
SLC38A9-220ENST00000513993 PDE4AP27815 886 aa13.59□□□□□ -0.23
SLC38A9-220ENST00000513993 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
SLC38A9-220ENST00000513993 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
SLC38A9-220ENST00000513993 DPY19L2Q6NUT2 758 aa13.58□□□□□ -0.24
SLC38A9-220ENST00000513993 CLCN6P51797 869 aa13.56□□□□□ -0.24
SLC38A9-220ENST00000513993 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
SLC38A9-220ENST00000513993 ATMINO43313 823 aaPredicted RBP13.54□□□□□ -0.24
SLC38A9-220ENST00000513993 ARHGEF1Q92888 912 aaKnown RBP13.53□□□□□ -0.24
SLC38A9-220ENST00000513993 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
SLC38A9-220ENST00000513993 MFSD10Q14728 455 aa13.52□□□□□ -0.25
SLC38A9-220ENST00000513993 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
SLC38A9-220ENST00000513993 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
SLC38A9-220ENST00000513993 GABBR2O75899 941 aa13.48□□□□□ -0.25
SLC38A9-220ENST00000513993 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
SLC38A9-220ENST00000513993 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
SLC38A9-220ENST00000513993 SEMA3EO15041 775 aa13.45□□□□□ -0.26
SLC38A9-220ENST00000513993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.45□□□□□ -0.26
SLC38A9-220ENST00000513993 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
SLC38A9-220ENST00000513993 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
SLC38A9-220ENST00000513993 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
SLC38A9-220ENST00000513993 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
SLC38A9-220ENST00000513993 IER5LQ5T953 404 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms