RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
HMGN1P17-201ENST00000513734 RGL2O15211 777 aa12.65□□□□□ -0.38
HMGN1P17-201ENST00000513734 NUBP1P53384 320 aa12.64□□□□□ -0.39
HMGN1P17-201ENST00000513734 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
HMGN1P17-201ENST00000513734 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
HMGN1P17-201ENST00000513734 GSE1Q14687 1217 aa12.61□□□□□ -0.39
HMGN1P17-201ENST00000513734 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
HMGN1P17-201ENST00000513734 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
HMGN1P17-201ENST00000513734 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGN1P17-201ENST00000513734 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
HMGN1P17-201ENST00000513734 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
HMGN1P17-201ENST00000513734 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
HMGN1P17-201ENST00000513734 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
HMGN1P17-201ENST00000513734 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P17-201ENST00000513734 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
HMGN1P17-201ENST00000513734 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P17-201ENST00000513734 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P17-201ENST00000513734 SMARCA4P51532 1647 aa12.43□□□□□ -0.42
HMGN1P17-201ENST00000513734 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
HMGN1P17-201ENST00000513734 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
HMGN1P17-201ENST00000513734 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
HMGN1P17-201ENST00000513734 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.42
HMGN1P17-201ENST00000513734 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
HMGN1P17-201ENST00000513734 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
HMGN1P17-201ENST00000513734 PYGBP11216 843 aa12.37□□□□□ -0.43
HMGN1P17-201ENST00000513734 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
HMGN1P17-201ENST00000513734 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
HMGN1P17-201ENST00000513734 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
HMGN1P17-201ENST00000513734 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
HMGN1P17-201ENST00000513734 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
HMGN1P17-201ENST00000513734 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
HMGN1P17-201ENST00000513734 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
HMGN1P17-201ENST00000513734 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
HMGN1P17-201ENST00000513734 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
HMGN1P17-201ENST00000513734 STK25O00506 426 aa12.27□□□□□ -0.45
HMGN1P17-201ENST00000513734 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
HMGN1P17-201ENST00000513734 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
HMGN1P17-201ENST00000513734 NESP48681 1621 aa12.23□□□□□ -0.45
HMGN1P17-201ENST00000513734 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
HMGN1P17-201ENST00000513734 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P17-201ENST00000513734 ZFP91Q96JP5 570 aaPredicted RBP12.22□□□□□ -0.45
HMGN1P17-201ENST00000513734 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
HMGN1P17-201ENST00000513734 WIZO95785 1651 aa12.21□□□□□ -0.45
HMGN1P17-201ENST00000513734 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
HMGN1P17-201ENST00000513734 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P17-201ENST00000513734 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
HMGN1P17-201ENST00000513734 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
HMGN1P17-201ENST00000513734 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P17-201ENST00000513734 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
HMGN1P17-201ENST00000513734 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
HMGN1P17-201ENST00000513734 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
HMGN1P17-201ENST00000513734 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
HMGN1P17-201ENST00000513734 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
HMGN1P17-201ENST00000513734 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
HMGN1P17-201ENST00000513734 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.46
HMGN1P17-201ENST00000513734 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
HMGN1P17-201ENST00000513734 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
HMGN1P17-201ENST00000513734 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
HMGN1P17-201ENST00000513734 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
HMGN1P17-201ENST00000513734 ZNF579Q8NAF0 562 aaKnown RBP12.09□□□□□ -0.47
HMGN1P17-201ENST00000513734 CUX2O14529 1486 aa12.08□□□□□ -0.47
HMGN1P17-201ENST00000513734 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
HMGN1P17-201ENST00000513734 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
HMGN1P17-201ENST00000513734 LAMC3Q9Y6N6 1575 aa12.08□□□□□ -0.48
HMGN1P17-201ENST00000513734 MAP3K13O43283 966 aa12.06□□□□□ -0.48
HMGN1P17-201ENST00000513734 PSEN1P49768 467 aa12.06□□□□□ -0.48
HMGN1P17-201ENST00000513734 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
HMGN1P17-201ENST00000513734 IFNL1Q8IU54 200 aa12.05□□□□□ -0.48
HMGN1P17-201ENST00000513734 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
HMGN1P17-201ENST00000513734 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P17-201ENST00000513734 PHF12Q96QT6 1004 aa12□□□□□ -0.49
HMGN1P17-201ENST00000513734 BCANQ96GW7 911 aa11.99□□□□□ -0.49
HMGN1P17-201ENST00000513734 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
HMGN1P17-201ENST00000513734 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
HMGN1P17-201ENST00000513734 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
HMGN1P17-201ENST00000513734 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
HMGN1P17-201ENST00000513734 PDS5BQ9NTI5 1447 aa11.93□□□□□ -0.5
HMGN1P17-201ENST00000513734 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
HMGN1P17-201ENST00000513734 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
HMGN1P17-201ENST00000513734 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
HMGN1P17-201ENST00000513734 WDR62O43379 1518 aa11.9□□□□□ -0.5
HMGN1P17-201ENST00000513734 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
HMGN1P17-201ENST00000513734 CFTRP13569 1480 aa11.87□□□□□ -0.51
HMGN1P17-201ENST00000513734 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
HMGN1P17-201ENST00000513734 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
HMGN1P17-201ENST00000513734 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
HMGN1P17-201ENST00000513734 TMEM106CQ9BVX2 250 aa11.84□□□□□ -0.51
HMGN1P17-201ENST00000513734 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
HMGN1P17-201ENST00000513734 SOX12O15370 315 aa11.83□□□□□ -0.52
HMGN1P17-201ENST00000513734 NLRP6P59044 892 aa11.83□□□□□ -0.52
HMGN1P17-201ENST00000513734 PHF8Q9UPP1 1060 aa11.83□□□□□ -0.52
HMGN1P17-201ENST00000513734 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
HMGN1P17-201ENST00000513734 POTEHQ6S545 545 aa11.82□□□□□ -0.52
HMGN1P17-201ENST00000513734 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
HMGN1P17-201ENST00000513734 HAX1O00165 279 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 347.7 ms