RNA–Protein interactions for RNA: ENST00000512194.1

HERC3-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-210ENST00000512194 DCAF8Q5TAQ9 597 aa14.26□□□□□ -0.13
HERC3-210ENST00000512194 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
HERC3-210ENST00000512194 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.25□□□□□ -0.13
HERC3-210ENST00000512194 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
HERC3-210ENST00000512194 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
HERC3-210ENST00000512194 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
HERC3-210ENST00000512194 CHGAP10645 457 aaKnown RBP14.14□□□□□ -0.15
HERC3-210ENST00000512194 CHRM1P11229 460 aaPredicted RBP14.14□□□□□ -0.15
HERC3-210ENST00000512194 TAOK2Q9UL54 1235 aa14.14□□□□□ -0.15
HERC3-210ENST00000512194 RNF25Q96BH1 459 aaPredicted RBP14.12□□□□□ -0.15
HERC3-210ENST00000512194 RIOK3O14730 519 aaKnown RBP14.09□□□□□ -0.15
HERC3-210ENST00000512194 HS6ST3Q8IZP7 471 aa14.09□□□□□ -0.15
HERC3-210ENST00000512194 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
HERC3-210ENST00000512194 PAXIP1Q6ZW49 1069 aaPredicted RBP14.07□□□□□ -0.16
HERC3-210ENST00000512194 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
HERC3-210ENST00000512194 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
HERC3-210ENST00000512194 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
HERC3-210ENST00000512194 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
HERC3-210ENST00000512194 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
HERC3-210ENST00000512194 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
HERC3-210ENST00000512194 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.16
HERC3-210ENST00000512194 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.17
HERC3-210ENST00000512194 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
HERC3-210ENST00000512194 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
HERC3-210ENST00000512194 PYGBP11216 843 aa13.98□□□□□ -0.17
HERC3-210ENST00000512194 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
HERC3-210ENST00000512194 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
HERC3-210ENST00000512194 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
HERC3-210ENST00000512194 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
HERC3-210ENST00000512194 STK25O00506 426 aa13.91□□□□□ -0.18
HERC3-210ENST00000512194 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
HERC3-210ENST00000512194 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
HERC3-210ENST00000512194 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
HERC3-210ENST00000512194 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
HERC3-210ENST00000512194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
HERC3-210ENST00000512194 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
HERC3-210ENST00000512194 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
HERC3-210ENST00000512194 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
HERC3-210ENST00000512194 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
HERC3-210ENST00000512194 BCL11BQ9C0K0 894 aaPredicted RBP13.83□□□□□ -0.2
HERC3-210ENST00000512194 STK24Q9Y6E0 443 aa13.83□□□□□ -0.2
HERC3-210ENST00000512194 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
HERC3-210ENST00000512194 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
HERC3-210ENST00000512194 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
HERC3-210ENST00000512194 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
HERC3-210ENST00000512194 RYDENQ9NUL5 291 aaKnown RBP13.78□□□□□ -0.2
HERC3-210ENST00000512194 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
HERC3-210ENST00000512194 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
HERC3-210ENST00000512194 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
HERC3-210ENST00000512194 BCANQ96GW7 911 aa13.73□□□□□ -0.21
HERC3-210ENST00000512194 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
HERC3-210ENST00000512194 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
HERC3-210ENST00000512194 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
HERC3-210ENST00000512194 KIF12Q96FN5 646 aa13.68□□□□□ -0.22
HERC3-210ENST00000512194 PSEN1P49768 467 aa13.67□□□□□ -0.22
HERC3-210ENST00000512194 MAP3K13O43283 966 aa13.65□□□□□ -0.22
HERC3-210ENST00000512194 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
HERC3-210ENST00000512194 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
HERC3-210ENST00000512194 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
HERC3-210ENST00000512194 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
HERC3-210ENST00000512194 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
HERC3-210ENST00000512194 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
HERC3-210ENST00000512194 SOX12O15370 315 aa13.5□□□□□ -0.25
HERC3-210ENST00000512194 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
HERC3-210ENST00000512194 EFCAB3Q8N7B9 438 aa13.47□□□□□ -0.25
HERC3-210ENST00000512194 CUX2O14529 1486 aa13.47□□□□□ -0.25
HERC3-210ENST00000512194 NLRP6P59044 892 aa13.46□□□□□ -0.25
HERC3-210ENST00000512194 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
HERC3-210ENST00000512194 MS4A3Q96HJ5 214 aa13.4□□□□□ -0.26
HERC3-210ENST00000512194 NBR1Q14596 966 aa13.39□□□□□ -0.27
HERC3-210ENST00000512194 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
HERC3-210ENST00000512194 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
HERC3-210ENST00000512194 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
HERC3-210ENST00000512194 CLCN6P51797 869 aa13.36□□□□□ -0.27
HERC3-210ENST00000512194 TIE1P35590 1138 aa13.34□□□□□ -0.27
HERC3-210ENST00000512194 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
HERC3-210ENST00000512194 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
HERC3-210ENST00000512194 PPP1R37O75864 691 aa13.33□□□□□ -0.28
HERC3-210ENST00000512194 WDR70Q9NW82 654 aa13.33□□□□□ -0.28
HERC3-210ENST00000512194 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
HERC3-210ENST00000512194 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
HERC3-210ENST00000512194 HAX1O00165 279 aa13.3□□□□□ -0.28
HERC3-210ENST00000512194 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
HERC3-210ENST00000512194 TTLL13PA6NNM8 815 aa13.27□□□□□ -0.29
HERC3-210ENST00000512194 NESP48681 1621 aa13.26□□□□□ -0.29
HERC3-210ENST00000512194 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
HERC3-210ENST00000512194 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
HERC3-210ENST00000512194 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
HERC3-210ENST00000512194 GALR2O43603 387 aaPredicted RBP13.23□□□□□ -0.29
HERC3-210ENST00000512194 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
HERC3-210ENST00000512194 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
HERC3-210ENST00000512194 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
HERC3-210ENST00000512194 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
HERC3-210ENST00000512194 EVX2Q03828 476 aa13.19□□□□□ -0.3
HERC3-210ENST00000512194 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
HERC3-210ENST00000512194 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
HERC3-210ENST00000512194 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
HERC3-210ENST00000512194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.3
HERC3-210ENST00000512194 PDE4AP27815 886 aa13.16□□□□□ -0.3
HERC3-210ENST00000512194 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms