RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
CDH9-204ENST00000511822 PHF12Q96QT6 1004 aa14.22□□□□□ -0.13
CDH9-204ENST00000511822 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
CDH9-204ENST00000511822 NUBP1P53384 320 aa14.18□□□□□ -0.14
CDH9-204ENST00000511822 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
CDH9-204ENST00000511822 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
CDH9-204ENST00000511822 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
CDH9-204ENST00000511822 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
CDH9-204ENST00000511822 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
CDH9-204ENST00000511822 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
CDH9-204ENST00000511822 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
CDH9-204ENST00000511822 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
CDH9-204ENST00000511822 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
CDH9-204ENST00000511822 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
CDH9-204ENST00000511822 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
CDH9-204ENST00000511822 DCBLD2Q96PD2 775 aa14.03□□□□□ -0.16
CDH9-204ENST00000511822 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
CDH9-204ENST00000511822 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
CDH9-204ENST00000511822 MAP3K13O43283 966 aa13.97□□□□□ -0.17
CDH9-204ENST00000511822 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
CDH9-204ENST00000511822 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
CDH9-204ENST00000511822 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
CDH9-204ENST00000511822 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
CDH9-204ENST00000511822 GSE1Q14687 1217 aa13.89□□□□□ -0.19
CDH9-204ENST00000511822 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
CDH9-204ENST00000511822 CC2D2AQ9P2K1 1620 aa13.87□□□□□ -0.19
CDH9-204ENST00000511822 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
CDH9-204ENST00000511822 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
CDH9-204ENST00000511822 PYGBP11216 843 aa13.85□□□□□ -0.19
CDH9-204ENST00000511822 ATMINO43313 823 aaPredicted RBP13.84□□□□□ -0.19
CDH9-204ENST00000511822 IFNL1Q8IU54 200 aa13.83□□□□□ -0.2
CDH9-204ENST00000511822 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
CDH9-204ENST00000511822 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
CDH9-204ENST00000511822 TIE1P35590 1138 aa13.8□□□□□ -0.2
CDH9-204ENST00000511822 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
CDH9-204ENST00000511822 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
CDH9-204ENST00000511822 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
CDH9-204ENST00000511822 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
CDH9-204ENST00000511822 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
CDH9-204ENST00000511822 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
CDH9-204ENST00000511822 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
CDH9-204ENST00000511822 LHX8Q68G74 356 aa13.75□□□□□ -0.21
CDH9-204ENST00000511822 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
CDH9-204ENST00000511822 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
CDH9-204ENST00000511822 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
CDH9-204ENST00000511822 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
CDH9-204ENST00000511822 C7P10643 843 aa13.68□□□□□ -0.22
CDH9-204ENST00000511822 ZNF467Q7Z7K2 595 aaPredicted RBP13.68□□□□□ -0.22
CDH9-204ENST00000511822 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
CDH9-204ENST00000511822 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
CDH9-204ENST00000511822 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
CDH9-204ENST00000511822 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
CDH9-204ENST00000511822 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
CDH9-204ENST00000511822 IER5LQ5T953 404 aa13.57□□□□□ -0.24
CDH9-204ENST00000511822 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
CDH9-204ENST00000511822 PSEN1P49768 467 aa13.54□□□□□ -0.24
CDH9-204ENST00000511822 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
CDH9-204ENST00000511822 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
CDH9-204ENST00000511822 SEC24BO95487 1268 aa13.5□□□□□ -0.25
CDH9-204ENST00000511822 CUX2O14529 1486 aa13.48□□□□□ -0.25
CDH9-204ENST00000511822 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
CDH9-204ENST00000511822 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
CDH9-204ENST00000511822 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
CDH9-204ENST00000511822 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
CDH9-204ENST00000511822 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
CDH9-204ENST00000511822 PLCG2P16885 1265 aa13.42□□□□□ -0.26
CDH9-204ENST00000511822 PKD2Q13563 968 aa13.42□□□□□ -0.26
CDH9-204ENST00000511822 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
CDH9-204ENST00000511822 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
CDH9-204ENST00000511822 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
CDH9-204ENST00000511822 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
CDH9-204ENST00000511822 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
CDH9-204ENST00000511822 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
CDH9-204ENST00000511822 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
CDH9-204ENST00000511822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
CDH9-204ENST00000511822 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
CDH9-204ENST00000511822 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
CDH9-204ENST00000511822 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
CDH9-204ENST00000511822 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
CDH9-204ENST00000511822 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
CDH9-204ENST00000511822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
CDH9-204ENST00000511822 RGL2O15211 777 aa13.29□□□□□ -0.28
CDH9-204ENST00000511822 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
CDH9-204ENST00000511822 TAOK2Q9UL54 1235 aa13.28□□□□□ -0.28
CDH9-204ENST00000511822 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
CDH9-204ENST00000511822 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
CDH9-204ENST00000511822 L3MBTL3Q96JM7 780 aaPredicted RBP13.19□□□□□ -0.3
CDH9-204ENST00000511822 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
CDH9-204ENST00000511822 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
CDH9-204ENST00000511822 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
CDH9-204ENST00000511822 STK25O00506 426 aa13.17□□□□□ -0.3
CDH9-204ENST00000511822 SOX12O15370 315 aa13.17□□□□□ -0.3
CDH9-204ENST00000511822 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
CDH9-204ENST00000511822 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
CDH9-204ENST00000511822 SMARCA2P51531 1590 aa13.13□□□□□ -0.31
CDH9-204ENST00000511822 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
CDH9-204ENST00000511822 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
CDH9-204ENST00000511822 C3orf67Q6ZVT6 689 aa13.1□□□□□ -0.31
CDH9-204ENST00000511822 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
CDH9-204ENST00000511822 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms