RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
MATR3-217ENST00000511333 MAMSTRQ6ZN01 415 aa14.51□□□□□ -0.09
MATR3-217ENST00000511333 ATMINO43313 823 aaPredicted RBP14.5□□□□□ -0.09
MATR3-217ENST00000511333 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
MATR3-217ENST00000511333 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
MATR3-217ENST00000511333 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
MATR3-217ENST00000511333 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
MATR3-217ENST00000511333 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
MATR3-217ENST00000511333 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
MATR3-217ENST00000511333 POTEFA5A3E0 1075 aa14.28□□□□□ -0.12
MATR3-217ENST00000511333 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
MATR3-217ENST00000511333 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
MATR3-217ENST00000511333 KIF12Q96FN5 646 aa14.17□□□□□ -0.14
MATR3-217ENST00000511333 TIE1P35590 1138 aa14.13□□□□□ -0.15
MATR3-217ENST00000511333 CDAN1Q8IWY9 1227 aa14.13□□□□□ -0.15
MATR3-217ENST00000511333 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
MATR3-217ENST00000511333 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
MATR3-217ENST00000511333 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
MATR3-217ENST00000511333 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
MATR3-217ENST00000511333 PROM2Q8N271 834 aa14.02□□□□□ -0.17
MATR3-217ENST00000511333 TTLL13PA6NNM8 815 aa14□□□□□ -0.17
MATR3-217ENST00000511333 MAP3K13O43283 966 aa14□□□□□ -0.17
MATR3-217ENST00000511333 IER5LQ5T953 404 aa14□□□□□ -0.17
MATR3-217ENST00000511333 SEC24BO95487 1268 aa13.94□□□□□ -0.18
MATR3-217ENST00000511333 ST18O60284 1047 aa13.93□□□□□ -0.18
MATR3-217ENST00000511333 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
MATR3-217ENST00000511333 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
MATR3-217ENST00000511333 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
MATR3-217ENST00000511333 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
MATR3-217ENST00000511333 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
MATR3-217ENST00000511333 SPNS2Q8IVW8 549 aa13.84□□□□□ -0.19
MATR3-217ENST00000511333 TMEM121BQ9BXQ6 578 aaPredicted RBP13.82□□□□□ -0.2
MATR3-217ENST00000511333 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
MATR3-217ENST00000511333 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
MATR3-217ENST00000511333 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
MATR3-217ENST00000511333 PLCG2P16885 1265 aa13.69□□□□□ -0.22
MATR3-217ENST00000511333 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
MATR3-217ENST00000511333 MIER1Q8N108 512 aa13.65□□□□□ -0.22
MATR3-217ENST00000511333 SNPHO15079 494 aa13.64□□□□□ -0.23
MATR3-217ENST00000511333 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
MATR3-217ENST00000511333 NUBP1P53384 320 aa13.61□□□□□ -0.23
MATR3-217ENST00000511333 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
MATR3-217ENST00000511333 MARVELD3Q96A59 401 aa13.56□□□□□ -0.24
MATR3-217ENST00000511333 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.54□□□□□ -0.24
MATR3-217ENST00000511333 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
MATR3-217ENST00000511333 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
MATR3-217ENST00000511333 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
MATR3-217ENST00000511333 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
MATR3-217ENST00000511333 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
MATR3-217ENST00000511333 EMP3P54852 163 aa13.43□□□□□ -0.26
MATR3-217ENST00000511333 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
MATR3-217ENST00000511333 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
MATR3-217ENST00000511333 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
MATR3-217ENST00000511333 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
MATR3-217ENST00000511333 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
MATR3-217ENST00000511333 C3orf67Q6ZVT6 689 aa13.32□□□□□ -0.28
MATR3-217ENST00000511333 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
MATR3-217ENST00000511333 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
MATR3-217ENST00000511333 PYGBP11216 843 aa13.25□□□□□ -0.29
MATR3-217ENST00000511333 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
MATR3-217ENST00000511333 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
MATR3-217ENST00000511333 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
MATR3-217ENST00000511333 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
MATR3-217ENST00000511333 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
MATR3-217ENST00000511333 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
MATR3-217ENST00000511333 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
MATR3-217ENST00000511333 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
MATR3-217ENST00000511333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.312e-9■■□□□ 14.4
MATR3-217ENST00000511333 GOLGA2Q08379 1002 aa13.1□□□□□ -0.31
MATR3-217ENST00000511333 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
MATR3-217ENST00000511333 PSEN1P49768 467 aa13□□□□□ -0.33
MATR3-217ENST00000511333 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
MATR3-217ENST00000511333 ERBB3P21860 1342 aa12.99□□□□□ -0.33
MATR3-217ENST00000511333 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
MATR3-217ENST00000511333 GSE1Q14687 1217 aa12.98□□□□□ -0.33
MATR3-217ENST00000511333 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
MATR3-217ENST00000511333 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
MATR3-217ENST00000511333 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
MATR3-217ENST00000511333 PTGER2P43116 358 aa12.94□□□□□ -0.34
MATR3-217ENST00000511333 PDAP1Q13442 181 aaKnown RBP12.91□□□□□ -0.34
MATR3-217ENST00000511333 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
MATR3-217ENST00000511333 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
MATR3-217ENST00000511333 G3V3G9 751 aa12.88□□□□□ -0.35
MATR3-217ENST00000511333 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
MATR3-217ENST00000511333 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
MATR3-217ENST00000511333 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
MATR3-217ENST00000511333 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
MATR3-217ENST00000511333 GPR153Q6NV75 609 aa12.79□□□□□ -0.36
MATR3-217ENST00000511333 FKBP8Q14318 412 aa12.76□□□□□ -0.37
MATR3-217ENST00000511333 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
MATR3-217ENST00000511333 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
MATR3-217ENST00000511333 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
MATR3-217ENST00000511333 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
MATR3-217ENST00000511333 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
MATR3-217ENST00000511333 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
MATR3-217ENST00000511333 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
MATR3-217ENST00000511333 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
MATR3-217ENST00000511333 PLA2G2EQ9NZK7 142 aa12.59□□□□□ -0.39
MATR3-217ENST00000511333 ARSIQ5FYB1 569 aa12.56□□□□□ -0.4
MATR3-217ENST00000511333 PBX2P40425 430 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms