RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 CHRM1P11229 460 aaPredicted RBP10.6□□□□□ -0.71
PROM1-212ENST00000511270 ZCCHC6Q5VYS8 1495 aaKnown RBP10.6□□□□□ -0.71
PROM1-212ENST00000511270 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
PROM1-212ENST00000511270 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
PROM1-212ENST00000511270 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
PROM1-212ENST00000511270 RGL2O15211 777 aa10.52□□□□□ -0.73
PROM1-212ENST00000511270 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
PROM1-212ENST00000511270 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
PROM1-212ENST00000511270 RNF25Q96BH1 459 aaPredicted RBP10.49□□□□□ -0.73
PROM1-212ENST00000511270 PYGBP11216 843 aa10.48□□□□□ -0.73
PROM1-212ENST00000511270 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
PROM1-212ENST00000511270 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.73
PROM1-212ENST00000511270 SGIP1Q9BQI5 828 aa10.46□□□□□ -0.73
PROM1-212ENST00000511270 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
PROM1-212ENST00000511270 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
PROM1-212ENST00000511270 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
PROM1-212ENST00000511270 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
PROM1-212ENST00000511270 VGFO15240 615 aaPredicted RBP10.42□□□□□ -0.74
PROM1-212ENST00000511270 POTEHQ6S545 545 aa10.42□□□□□ -0.74
PROM1-212ENST00000511270 KIF12Q96FN5 646 aa10.41□□□□□ -0.74
PROM1-212ENST00000511270 DCAF1Q9Y4B6 1507 aa10.41□□□□□ -0.74
PROM1-212ENST00000511270 HAX1O00165 279 aa10.37□□□□□ -0.75
PROM1-212ENST00000511270 CLCN6P51797 869 aa10.37□□□□□ -0.75
PROM1-212ENST00000511270 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
PROM1-212ENST00000511270 MAP3K13O43283 966 aa10.36□□□□□ -0.75
PROM1-212ENST00000511270 DNAJC5Q9H3Z4 198 aa10.36□□□□□ -0.75
PROM1-212ENST00000511270 PCDHB13Q9Y5F0 798 aa10.36□□□□□ -0.75
PROM1-212ENST00000511270 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
PROM1-212ENST00000511270 CHGAP10645 457 aaKnown RBP10.33□□□□□ -0.76
PROM1-212ENST00000511270 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
PROM1-212ENST00000511270 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
PROM1-212ENST00000511270 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
PROM1-212ENST00000511270 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
PROM1-212ENST00000511270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
PROM1-212ENST00000511270 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
PROM1-212ENST00000511270 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
PROM1-212ENST00000511270 PCDHB8Q9UN66 801 aa10.3□□□□□ -0.76
PROM1-212ENST00000511270 ABCC9O60706 1549 aa10.29□□□□□ -0.76
PROM1-212ENST00000511270 STK25O00506 426 aa10.28□□□□□ -0.76
PROM1-212ENST00000511270 EVX2Q03828 476 aa10.28□□□□□ -0.76
PROM1-212ENST00000511270 PSEN1P49768 467 aa10.26□□□□□ -0.77
PROM1-212ENST00000511270 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
PROM1-212ENST00000511270 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
PROM1-212ENST00000511270 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
PROM1-212ENST00000511270 BCL11BQ9C0K0 894 aaPredicted RBP10.25□□□□□ -0.77
PROM1-212ENST00000511270 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
PROM1-212ENST00000511270 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
PROM1-212ENST00000511270 TIE1P35590 1138 aa10.21□□□□□ -0.77
PROM1-212ENST00000511270 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
PROM1-212ENST00000511270 NACADO15069 1562 aa10.18□□□□□ -0.78
PROM1-212ENST00000511270 NKX1-1Q15270 411 aaPredicted RBP10.17□□□□□ -0.78
PROM1-212ENST00000511270 RYDENQ9NUL5 291 aaKnown RBP10.17□□□□□ -0.78
PROM1-212ENST00000511270 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
PROM1-212ENST00000511270 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
PROM1-212ENST00000511270 TMEM106CQ9BVX2 250 aa10.15□□□□□ -0.78
PROM1-212ENST00000511270 GABBR2O75899 941 aa10.14□□□□□ -0.79
PROM1-212ENST00000511270 TTLL13PA6NNM8 815 aa10.13□□□□□ -0.79
PROM1-212ENST00000511270 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
PROM1-212ENST00000511270 PAXIP1Q6ZW49 1069 aaPredicted RBP10.12□□□□□ -0.79
PROM1-212ENST00000511270 SP7Q8TDD2 431 aaPredicted RBP10.12□□□□□ -0.79
PROM1-212ENST00000511270 SOX12O15370 315 aa10.11□□□□□ -0.79
PROM1-212ENST00000511270 CABP2Q9NPB3 220 aa10.11□□□□□ -0.79
PROM1-212ENST00000511270 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
PROM1-212ENST00000511270 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
PROM1-212ENST00000511270 SCRIBQ14160 1630 aa10.1□□□□□ -0.79
PROM1-212ENST00000511270 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
PROM1-212ENST00000511270 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
PROM1-212ENST00000511270 RB1CC1Q8TDY2 1594 aa10.08□□□□□ -0.8
PROM1-212ENST00000511270 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
PROM1-212ENST00000511270 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
PROM1-212ENST00000511270 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
PROM1-212ENST00000511270 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
PROM1-212ENST00000511270 NLRP6P59044 892 aa10.04□□□□□ -0.8
PROM1-212ENST00000511270 MKRN3Q13064 507 aaKnown RBP10.04□□□□□ -0.8
PROM1-212ENST00000511270 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
PROM1-212ENST00000511270 FBXO22Q8NEZ5 403 aa10.04□□□□□ -0.8
PROM1-212ENST00000511270 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
PROM1-212ENST00000511270 IER5LQ5T953 404 aa10.02□□□□□ -0.81
PROM1-212ENST00000511270 UNC13AQ9UPW8 1703 aa10.02□□□□□ -0.81
PROM1-212ENST00000511270 DCBLD2Q96PD2 775 aa10.01□□□□□ -0.81
PROM1-212ENST00000511270 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
PROM1-212ENST00000511270 HAP1P54257 671 aaPredicted RBP9.99□□□□□ -0.81
PROM1-212ENST00000511270 MS4A4AQ96JQ5 239 aa9.96□□□□□ -0.82
PROM1-212ENST00000511270 IRX5P78411 483 aaPredicted RBP9.95□□□□□ -0.82
PROM1-212ENST00000511270 VSIG10Q8N0Z9 540 aa9.95□□□□□ -0.82
PROM1-212ENST00000511270 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
PROM1-212ENST00000511270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.94□□□□□ -0.82
PROM1-212ENST00000511270 SLC39A7Q92504 469 aa9.93□□□□□ -0.82
PROM1-212ENST00000511270 POTEIP0CG38 1075 aa9.92□□□□□ -0.82
PROM1-212ENST00000511270 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
PROM1-212ENST00000511270 C7P10643 843 aa9.91□□□□□ -0.82
PROM1-212ENST00000511270 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
PROM1-212ENST00000511270 PDCD7Q8N8D1 485 aaKnown RBP9.91□□□□□ -0.82
PROM1-212ENST00000511270 OCEL1Q9H607 264 aa9.91□□□□□ -0.82
PROM1-212ENST00000511270 PPP1R37O75864 691 aa9.89□□□□□ -0.83
PROM1-212ENST00000511270 PLCG2P16885 1265 aa9.87□□□□□ -0.83
PROM1-212ENST00000511270 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
PROM1-212ENST00000511270 BICRAQ9NZM4 1560 aa9.84□□□□□ -0.83
PROM1-212ENST00000511270 SEC24BO95487 1268 aa9.83□□□□□ -0.84
PROM1-212ENST00000511270 KDM2AQ9Y2K7 1162 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms