RNA–Protein interactions for RNA: ENST00000511233.5

SLC38A9-216, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 1,399 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-216ENST00000511233 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
SLC38A9-216ENST00000511233 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
SLC38A9-216ENST00000511233 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
SLC38A9-216ENST00000511233 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
SLC38A9-216ENST00000511233 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
SLC38A9-216ENST00000511233 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
SLC38A9-216ENST00000511233 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
SLC38A9-216ENST00000511233 ATN1P54259 1190 aaPredicted RBP12.97□□□□□ -0.33
SLC38A9-216ENST00000511233 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
SLC38A9-216ENST00000511233 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
SLC38A9-216ENST00000511233 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
SLC38A9-216ENST00000511233 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
SLC38A9-216ENST00000511233 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
SLC38A9-216ENST00000511233 SEC24BO95487 1268 aa12.8□□□□□ -0.36
SLC38A9-216ENST00000511233 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
SLC38A9-216ENST00000511233 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
SLC38A9-216ENST00000511233 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
SLC38A9-216ENST00000511233 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
SLC38A9-216ENST00000511233 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
SLC38A9-216ENST00000511233 ST18O60284 1047 aa12.73□□□□□ -0.37
SLC38A9-216ENST00000511233 TIE1P35590 1138 aa12.69□□□□□ -0.38
SLC38A9-216ENST00000511233 SLAIN1Q8ND83 568 aa12.69□□□□□ -0.38
SLC38A9-216ENST00000511233 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
SLC38A9-216ENST00000511233 MAP3K13O43283 966 aa12.67□□□□□ -0.38
SLC38A9-216ENST00000511233 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
SLC38A9-216ENST00000511233 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
SLC38A9-216ENST00000511233 IER5LQ5T953 404 aa12.55□□□□□ -0.4
SLC38A9-216ENST00000511233 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
SLC38A9-216ENST00000511233 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
SLC38A9-216ENST00000511233 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
SLC38A9-216ENST00000511233 PLCG2P16885 1265 aa12.47□□□□□ -0.41
SLC38A9-216ENST00000511233 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
SLC38A9-216ENST00000511233 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
SLC38A9-216ENST00000511233 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
SLC38A9-216ENST00000511233 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
SLC38A9-216ENST00000511233 SNPHO15079 494 aa12.42□□□□□ -0.42
SLC38A9-216ENST00000511233 MIER1Q8N108 512 aa12.38□□□□□ -0.43
SLC38A9-216ENST00000511233 TMEM106CQ9BVX2 250 aa12.38□□□□□ -0.43
SLC38A9-216ENST00000511233 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
SLC38A9-216ENST00000511233 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
SLC38A9-216ENST00000511233 EMP3P54852 163 aa12.32□□□□□ -0.44
SLC38A9-216ENST00000511233 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
SLC38A9-216ENST00000511233 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
SLC38A9-216ENST00000511233 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
SLC38A9-216ENST00000511233 PROM2Q8N271 834 aa12.25□□□□□ -0.45
SLC38A9-216ENST00000511233 KRTAP3-3Q9BYR6 98 aa12.25□□□□□ -0.45
SLC38A9-216ENST00000511233 KRTAP3-2Q9BYR7 98 aa12.25□□□□□ -0.45
SLC38A9-216ENST00000511233 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
SLC38A9-216ENST00000511233 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
SLC38A9-216ENST00000511233 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
SLC38A9-216ENST00000511233 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
SLC38A9-216ENST00000511233 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
SLC38A9-216ENST00000511233 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
SLC38A9-216ENST00000511233 NUBP1P53384 320 aa12.13□□□□□ -0.47
SLC38A9-216ENST00000511233 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
SLC38A9-216ENST00000511233 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
SLC38A9-216ENST00000511233 RNF166Q96A37 237 aaPredicted RBP12.04□□□□□ -0.48
SLC38A9-216ENST00000511233 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
SLC38A9-216ENST00000511233 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
SLC38A9-216ENST00000511233 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
SLC38A9-216ENST00000511233 PYGBP11216 843 aa12□□□□□ -0.49
SLC38A9-216ENST00000511233 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
SLC38A9-216ENST00000511233 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
SLC38A9-216ENST00000511233 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
SLC38A9-216ENST00000511233 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
SLC38A9-216ENST00000511233 ERBB3P21860 1342 aa11.91□□□□□ -0.5
SLC38A9-216ENST00000511233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.54e-7■■■□□ 18.6
SLC38A9-216ENST00000511233 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
SLC38A9-216ENST00000511233 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
SLC38A9-216ENST00000511233 HOXB1P14653 301 aaPredicted RBP11.84□□□□□ -0.51
SLC38A9-216ENST00000511233 G3V3G9 751 aa11.8□□□□□ -0.52
SLC38A9-216ENST00000511233 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
SLC38A9-216ENST00000511233 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
SLC38A9-216ENST00000511233 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
SLC38A9-216ENST00000511233 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
SLC38A9-216ENST00000511233 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
SLC38A9-216ENST00000511233 PSEN1P49768 467 aa11.71□□□□□ -0.53
SLC38A9-216ENST00000511233 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
SLC38A9-216ENST00000511233 PTGER2P43116 358 aa11.67□□□□□ -0.54
SLC38A9-216ENST00000511233 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
SLC38A9-216ENST00000511233 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
SLC38A9-216ENST00000511233 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.55
SLC38A9-216ENST00000511233 GSE1Q14687 1217 aa11.6□□□□□ -0.55
SLC38A9-216ENST00000511233 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
SLC38A9-216ENST00000511233 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
SLC38A9-216ENST00000511233 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
SLC38A9-216ENST00000511233 ZSWIM6Q9HCJ5 1215 aa11.54□□□□□ -0.56
SLC38A9-216ENST00000511233 CHRM1P11229 460 aaPredicted RBP11.53□□□□□ -0.56
SLC38A9-216ENST00000511233 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
SLC38A9-216ENST00000511233 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
SLC38A9-216ENST00000511233 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
SLC38A9-216ENST00000511233 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
SLC38A9-216ENST00000511233 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
SLC38A9-216ENST00000511233 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
SLC38A9-216ENST00000511233 ZNF316A6NFI3 1004 aaPredicted RBP11.4□□□□□ -0.59
SLC38A9-216ENST00000511233 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
SLC38A9-216ENST00000511233 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
SLC38A9-216ENST00000511233 FKBP8Q14318 412 aa11.36□□□□□ -0.59
SLC38A9-216ENST00000511233 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
SLC38A9-216ENST00000511233 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms