RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
GYPB-212ENST00000511198 CLCN6P51797 869 aa14.84□□□□□ -0.03
GYPB-212ENST00000511198 GALR2O43603 387 aaPredicted RBP14.75□□□□□ -0.05
GYPB-212ENST00000511198 FAM212AQ96EL1 285 aa14.75□□□□□ -0.05
GYPB-212ENST00000511198 SPOCK2Q92563 424 aa14.72□□□□□ -0.05
GYPB-212ENST00000511198 KIF12Q96FN5 646 aa14.72□□□□□ -0.05
GYPB-212ENST00000511198 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
GYPB-212ENST00000511198 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
GYPB-212ENST00000511198 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
GYPB-212ENST00000511198 MAP3K13O43283 966 aa14.65□□□□□ -0.06
GYPB-212ENST00000511198 GSE1Q14687 1217 aa14.62□□□□□ -0.07
GYPB-212ENST00000511198 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
GYPB-212ENST00000511198 PYGBP11216 843 aa14.58□□□□□ -0.08
GYPB-212ENST00000511198 SGIP1Q9BQI5 828 aa14.57□□□□□ -0.08
GYPB-212ENST00000511198 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
GYPB-212ENST00000511198 TRPC6Q9Y210 931 aa14.54□□□□□ -0.08
GYPB-212ENST00000511198 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
GYPB-212ENST00000511198 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
GYPB-212ENST00000511198 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
GYPB-212ENST00000511198 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
GYPB-212ENST00000511198 ATMINO43313 823 aaPredicted RBP14.47□□□□□ -0.09
GYPB-212ENST00000511198 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
GYPB-212ENST00000511198 TIE1P35590 1138 aa14.44□□□□□ -0.1
GYPB-212ENST00000511198 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
GYPB-212ENST00000511198 PCDHB8Q9UN66 801 aa14.42□□□□□ -0.1
GYPB-212ENST00000511198 ATN1P54259 1190 aaPredicted RBP14.4□□□□□ -0.1
GYPB-212ENST00000511198 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
GYPB-212ENST00000511198 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
GYPB-212ENST00000511198 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
GYPB-212ENST00000511198 TMEM106CQ9BVX2 250 aa14.31□□□□□ -0.12
GYPB-212ENST00000511198 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
GYPB-212ENST00000511198 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
GYPB-212ENST00000511198 C7P10643 843 aa14.27□□□□□ -0.13
GYPB-212ENST00000511198 PKD2Q13563 968 aa14.27□□□□□ -0.13
GYPB-212ENST00000511198 LHX8Q68G74 356 aa14.26□□□□□ -0.13
GYPB-212ENST00000511198 METRNQ9UJH8 293 aa14.26□□□□□ -0.13
GYPB-212ENST00000511198 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
GYPB-212ENST00000511198 PSEN1P49768 467 aa14.24□□□□□ -0.13
GYPB-212ENST00000511198 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
GYPB-212ENST00000511198 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
GYPB-212ENST00000511198 POTEB2H3BUK9 544 aa14.2□□□□□ -0.14
GYPB-212ENST00000511198 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
GYPB-212ENST00000511198 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
GYPB-212ENST00000511198 IER5LQ5T953 404 aa14.17□□□□□ -0.14
GYPB-212ENST00000511198 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
GYPB-212ENST00000511198 RGL2O15211 777 aa14.09□□□□□ -0.15
GYPB-212ENST00000511198 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
GYPB-212ENST00000511198 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
GYPB-212ENST00000511198 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
GYPB-212ENST00000511198 SEC24BO95487 1268 aa14.08□□□□□ -0.16
GYPB-212ENST00000511198 ABCC9O60706 1549 aa14.06□□□□□ -0.16
GYPB-212ENST00000511198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
GYPB-212ENST00000511198 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
GYPB-212ENST00000511198 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
GYPB-212ENST00000511198 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
GYPB-212ENST00000511198 MKRN3Q13064 507 aaKnown RBP14.03□□□□□ -0.16
GYPB-212ENST00000511198 NISCHQ9Y2I1 1504 aa14.02□□□□□ -0.16
GYPB-212ENST00000511198 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
GYPB-212ENST00000511198 OCEL1Q9H607 264 aa14.02□□□□□ -0.17
GYPB-212ENST00000511198 PLCG2P16885 1265 aa14.01□□□□□ -0.17
GYPB-212ENST00000511198 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
GYPB-212ENST00000511198 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
GYPB-212ENST00000511198 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
GYPB-212ENST00000511198 EFCAB3Q8N7B9 438 aa13.96□□□□□ -0.17
GYPB-212ENST00000511198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.18
GYPB-212ENST00000511198 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
GYPB-212ENST00000511198 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
GYPB-212ENST00000511198 STK25O00506 426 aa13.9□□□□□ -0.18
GYPB-212ENST00000511198 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
GYPB-212ENST00000511198 DPY19L2Q6NUT2 758 aa13.86□□□□□ -0.19
GYPB-212ENST00000511198 SCUBE2Q9NQ36 999 aa13.86□□□□□ -0.19
GYPB-212ENST00000511198 SOX12O15370 315 aa13.85□□□□□ -0.19
GYPB-212ENST00000511198 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
GYPB-212ENST00000511198 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
GYPB-212ENST00000511198 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
GYPB-212ENST00000511198 HS6ST3Q8IZP7 471 aa13.78□□□□□ -0.2
GYPB-212ENST00000511198 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
GYPB-212ENST00000511198 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
GYPB-212ENST00000511198 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
GYPB-212ENST00000511198 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
GYPB-212ENST00000511198 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
GYPB-212ENST00000511198 NLRP6P59044 892 aa13.74□□□□□ -0.21
GYPB-212ENST00000511198 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
GYPB-212ENST00000511198 BOLA1Q9Y3E2 137 aa13.73□□□□□ -0.21
GYPB-212ENST00000511198 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
GYPB-212ENST00000511198 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
GYPB-212ENST00000511198 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
GYPB-212ENST00000511198 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
GYPB-212ENST00000511198 G3V3G9 751 aa13.64□□□□□ -0.23
GYPB-212ENST00000511198 MICALL2Q8IY33 904 aa13.64□□□□□ -0.23
GYPB-212ENST00000511198 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
GYPB-212ENST00000511198 DCAF8L2P0C7V8 631 aa13.62□□□□□ -0.23
GYPB-212ENST00000511198 PPP1R37O75864 691 aa13.57□□□□□ -0.24
GYPB-212ENST00000511198 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
GYPB-212ENST00000511198 TMEM92Q6UXU6 159 aa13.54□□□□□ -0.24
GYPB-212ENST00000511198 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
GYPB-212ENST00000511198 SNPHO15079 494 aa13.45□□□□□ -0.26
GYPB-212ENST00000511198 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
GYPB-212ENST00000511198 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
GYPB-212ENST00000511198 ST18O60284 1047 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms