RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 ZNF692Q9BU19 519 aaPredicted RBP7.58□□□□□ -1.2
SMN2-209ENST00000509805 MKRN4PQ13434 485 aaPredicted RBP7.54□□□□□ -1.2
SMN2-209ENST00000509805 ASTLQ6HA08 431 aaPredicted RBP7.51□□□□□ -1.21
SMN2-209ENST00000509805 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
SMN2-209ENST00000509805 ST18O60284 1047 aa7.47□□□□□ -1.21
SMN2-209ENST00000509805 PHF12Q96QT6 1004 aa7.47□□□□□ -1.21
SMN2-209ENST00000509805 PABPN1Q86U42 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
SMN2-209ENST00000509805 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
SMN2-209ENST00000509805 PAK3O75914 559 aaPredicted RBP7.38□□□□□ -1.23
SMN2-209ENST00000509805 POTEFA5A3E0 1075 aa7.37□□□□□ -1.23
SMN2-209ENST00000509805 MS4A3Q96HJ5 214 aa7.34□□□□□ -1.23
SMN2-209ENST00000509805 ATN1P54259 1190 aaPredicted RBP7.32□□□□□ -1.24
SMN2-209ENST00000509805 FKBP8Q14318 412 aa7.31□□□□□ -1.24
SMN2-209ENST00000509805 TMEM121BQ9BXQ6 578 aaPredicted RBP7.3□□□□□ -1.24
SMN2-209ENST00000509805 CREBZFQ9NS37 354 aa7.28□□□□□ -1.24
SMN2-209ENST00000509805 SLAIN1Q8ND83 568 aa7.27□□□□□ -1.25
SMN2-209ENST00000509805 STAG3Q9UJ98 1225 aa7.25□□□□□ -1.25
SMN2-209ENST00000509805 MARVELD3Q96A59 401 aa7.22□□□□□ -1.25
SMN2-209ENST00000509805 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
SMN2-209ENST00000509805 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
SMN2-209ENST00000509805 COLQQ9Y215 455 aaPredicted RBP7.21□□□□□ -1.26
SMN2-209ENST00000509805 SEC24BO95487 1268 aa7.19□□□□□ -1.26
SMN2-209ENST00000509805 PLEKHG5O94827 1062 aa7.15□□□□□ -1.26
SMN2-209ENST00000509805 BMP2KQ9NSY1 1161 aaPredicted RBP7.15□□□□□ -1.26
SMN2-209ENST00000509805 SNPHO15079 494 aa7.12□□□□□ -1.27
SMN2-209ENST00000509805 MIER1Q8N108 512 aa7.12□□□□□ -1.27
SMN2-209ENST00000509805 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMN2-209ENST00000509805 PLCD3Q8N3E9 789 aa7.11□□□□□ -1.27
SMN2-209ENST00000509805 POTEB3A0JP26 581 aa7.09□□□□□ -1.27
SMN2-209ENST00000509805 POTEBQ6S5H4 581 aa7.09□□□□□ -1.27
SMN2-209ENST00000509805 RNF166Q96A37 237 aaPredicted RBP7.09□□□□□ -1.27
SMN2-209ENST00000509805 FBXO3Q9UK99 471 aa7.09□□□□□ -1.27
SMN2-209ENST00000509805 EMP3P54852 163 aa7.08□□□□□ -1.28
SMN2-209ENST00000509805 PROM2Q8N271 834 aa7.08□□□□□ -1.28
SMN2-209ENST00000509805 HS3ST6Q96QI5 342 aa7.07□□□□□ -1.28
SMN2-209ENST00000509805 TRPC6Q9Y210 931 aa7.07□□□□□ -1.28
SMN2-209ENST00000509805 TIE1P35590 1138 aa7.06□□□□□ -1.28
SMN2-209ENST00000509805 IER5LQ5T953 404 aa7.03□□□□□ -1.28
SMN2-209ENST00000509805 FAM205CA6NFA0 338 aa7.02□□□□□ -1.29
SMN2-209ENST00000509805 MNX1P50219 401 aaPredicted RBP7.02□□□□□ -1.29
SMN2-209ENST00000509805 KLHL34Q8N239 644 aa7.01□□□□□ -1.29
SMN2-209ENST00000509805 KIF12Q96FN5 646 aa7.01□□□□□ -1.29
SMN2-209ENST00000509805 TTLL13PA6NNM8 815 aa7□□□□□ -1.29
SMN2-209ENST00000509805 ZBTB47Q9UFB7 747 aaPredicted RBP6.98□□□□□ -1.29
SMN2-209ENST00000509805 CCDC61Q9Y6R9 512 aa6.97□□□□□ -1.29
SMN2-209ENST00000509805 TSPYL2Q9H2G4 693 aaPredicted RBP6.96□□□□□ -1.3
SMN2-209ENST00000509805 MYT1LQ9UL68 1186 aa6.96□□□□□ -1.3
SMN2-209ENST00000509805 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
SMN2-209ENST00000509805 TRIM35Q9UPQ4 493 aa6.95□□□□□ -1.3
SMN2-209ENST00000509805 PLCG2P16885 1265 aa6.91□□□□□ -1.3
SMN2-209ENST00000509805 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.91□□□□□ -1.3
SMN2-209ENST00000509805 MAP3K13O43283 966 aa6.9□□□□□ -1.3
SMN2-209ENST00000509805 DCAF8Q5TAQ9 597 aa6.88□□□□□ -1.31
SMN2-209ENST00000509805 FAM212AQ96EL1 285 aa6.87□□□□□ -1.31
SMN2-209ENST00000509805 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
SMN2-209ENST00000509805 IRX5P78411 483 aaPredicted RBP6.83□□□□□ -1.32
SMN2-209ENST00000509805 CIZ1Q9ULV3 898 aaPredicted RBP6.83□□□□□ -1.32
SMN2-209ENST00000509805 SPOCK2Q92563 424 aa6.82□□□□□ -1.32
SMN2-209ENST00000509805 IFNLR1Q8IU57 520 aaPredicted RBP6.81□□□□□ -1.32
SMN2-209ENST00000509805 PLA2G2EQ9NZK7 142 aa6.81□□□□□ -1.32
SMN2-209ENST00000509805 NUBP1P53384 320 aa6.8□□□□□ -1.32
SMN2-209ENST00000509805 PYGBP11216 843 aa6.78□□□□□ -1.32
SMN2-209ENST00000509805 GSE1Q14687 1217 aa6.78□□□□□ -1.32
SMN2-209ENST00000509805 PTGER2P43116 358 aa6.77□□□□□ -1.33
SMN2-209ENST00000509805 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
SMN2-209ENST00000509805 PCDHB13Q9Y5F0 798 aa6.75□□□□□ -1.33
SMN2-209ENST00000509805 ERBB3P21860 1342 aa6.73□□□□□ -1.33
SMN2-209ENST00000509805 SGIP1Q9BQI5 828 aa6.71□□□□□ -1.34
SMN2-209ENST00000509805 TMEM106CQ9BVX2 250 aa6.71□□□□□ -1.34
SMN2-209ENST00000509805 C3orf67Q6ZVT6 689 aa6.7□□□□□ -1.34
SMN2-209ENST00000509805 HOXB1P14653 301 aaPredicted RBP6.68□□□□□ -1.34
SMN2-209ENST00000509805 IRX2Q9BZI1 471 aaPredicted RBP6.68□□□□□ -1.34
SMN2-209ENST00000509805 PCDHB8Q9UN66 801 aa6.67□□□□□ -1.34
SMN2-209ENST00000509805 IFNL1Q8IU54 200 aa6.66□□□□□ -1.34
SMN2-209ENST00000509805 GOLGA2Q08379 1002 aa6.65□□□□□ -1.34
SMN2-209ENST00000509805 ZNF467Q7Z7K2 595 aaPredicted RBP6.65□□□□□ -1.34
SMN2-209ENST00000509805 VARS2Q5ST30 1063 aaKnown RBP6.64□□□□□ -1.35
SMN2-209ENST00000509805 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
SMN2-209ENST00000509805 TRIM41Q8WV44 630 aa6.63□□□□□ -1.35
SMN2-209ENST00000509805 ZNF687Q8N1G0 1237 aa6.62□□□□□ -1.35
SMN2-209ENST00000509805 ECM2O94769 699 aaPredicted RBP6.61□□□□□ -1.35
SMN2-209ENST00000509805 ZNF710Q8N1W2 664 aa6.6□□□□□ -1.35
SMN2-209ENST00000509805 HCSTQ9UBK5 93 aa6.6□□□□□ -1.35
SMN2-209ENST00000509805 CHRM1P11229 460 aaPredicted RBP6.59□□□□□ -1.35
SMN2-209ENST00000509805 ANKRD13DQ6ZTN6 518 aa6.59□□□□□ -1.35
SMN2-209ENST00000509805 RGS20O76081 388 aa6.58□□□□□ -1.36
SMN2-209ENST00000509805 PSEN1P49768 467 aa6.58□□□□□ -1.36
SMN2-209ENST00000509805 L3MBTL3Q96JM7 780 aaPredicted RBP6.58□□□□□ -1.36
SMN2-209ENST00000509805 MKRN3Q13064 507 aaKnown RBP6.57□□□□□ -1.36
SMN2-209ENST00000509805 PDAP1Q13442 181 aaKnown RBP6.57□□□□□ -1.36
SMN2-209ENST00000509805 RIOK3O14730 519 aaKnown RBP6.56□□□□□ -1.36
SMN2-209ENST00000509805 DCAF8L2P0C7V8 631 aa6.55□□□□□ -1.36
SMN2-209ENST00000509805 PDCD7Q8N8D1 485 aaKnown RBP6.55□□□□□ -1.36
SMN2-209ENST00000509805 TAOK2Q9UL54 1235 aa6.55□□□□□ -1.36
SMN2-209ENST00000509805 CABP2Q9NPB3 220 aa6.53□□□□□ -1.36
SMN2-209ENST00000509805 VGFO15240 615 aaPredicted RBP6.51□□□□□ -1.37
SMN2-209ENST00000509805 DOK7Q18PE1 504 aa6.51□□□□□ -1.37
SMN2-209ENST00000509805 PKD2Q13563 968 aa6.5□□□□□ -1.37
SMN2-209ENST00000509805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.49□□□□□ -1.37
SMN2-209ENST00000509805 G3V3G9 751 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms