RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 PCDH10Q9P2E7 1040 aa5.9□□□□□ -1.46
CAST-226ENST00000509529 SLC39A7Q92504 469 aa5.9□□□□□ -1.47
CAST-226ENST00000509529 NPM1P06748 294 aaKnown RBP eCLIP5.89□□□□□ -1.47
CAST-226ENST00000509529 C7P10643 843 aa5.89□□□□□ -1.47
CAST-226ENST00000509529 SPDYE4A6NLX3 237 aa5.88□□□□□ -1.47
CAST-226ENST00000509529 MAMSTRQ6ZN01 415 aa5.86□□□□□ -1.47
CAST-226ENST00000509529 FAM163AQ96GL9 167 aaPredicted RBP5.85□□□□□ -1.47
CAST-226ENST00000509529 ATN1P54259 1190 aaPredicted RBP5.84□□□□□ -1.47
CAST-226ENST00000509529 CSRNP3Q8WYN3 585 aa5.84□□□□□ -1.47
CAST-226ENST00000509529 SCUBE2Q9NQ36 999 aa5.83□□□□□ -1.48
CAST-226ENST00000509529 POTEFA5A3E0 1075 aa5.82□□□□□ -1.48
CAST-226ENST00000509529 TSPYL2Q9H2G4 693 aaPredicted RBP5.82□□□□□ -1.48
CAST-226ENST00000509529 CCDC61Q9Y6R9 512 aa5.81□□□□□ -1.48
CAST-226ENST00000509529 TRPC6Q9Y210 931 aa5.8□□□□□ -1.48
CAST-226ENST00000509529 BMP2KQ9NSY1 1161 aaPredicted RBP5.79□□□□□ -1.48
CAST-226ENST00000509529 KIF12Q96FN5 646 aa5.78□□□□□ -1.48
CAST-226ENST00000509529 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
CAST-226ENST00000509529 CDAN1Q8IWY9 1227 aa5.75□□□□□ -1.49
CAST-226ENST00000509529 MAP3K13O43283 966 aa5.74□□□□□ -1.49
CAST-226ENST00000509529 TIE1P35590 1138 aa5.73□□□□□ -1.49
CAST-226ENST00000509529 TTLL13PA6NNM8 815 aa5.72□□□□□ -1.49
CAST-226ENST00000509529 SEC24BO95487 1268 aa5.71□□□□□ -1.49
CAST-226ENST00000509529 RASEFQ8IZ41 740 aa5.7□□□□□ -1.5
CAST-226ENST00000509529 PROM2Q8N271 834 aa5.7□□□□□ -1.5
CAST-226ENST00000509529 ST18O60284 1047 aa5.68□□□□□ -1.5
CAST-226ENST00000509529 TRIM35Q9UPQ4 493 aa5.68□□□□□ -1.5
CAST-226ENST00000509529 SLAIN1Q8ND83 568 aa5.67□□□□□ -1.5
CAST-226ENST00000509529 IER5LQ5T953 404 aa5.66□□□□□ -1.5
CAST-226ENST00000509529 PCDHB13Q9Y5F0 798 aa5.64□□□□□ -1.51
CAST-226ENST00000509529 MMRN1Q13201 1228 aa5.63□□□□□ -1.51
CAST-226ENST00000509529 MIER1Q8N108 512 aa5.63□□□□□ -1.51
CAST-226ENST00000509529 EHMT2Q96KQ7 1210 aa5.63□□□□□ -1.51
CAST-226ENST00000509529 PLEKHG5O94827 1062 aa5.62□□□□□ -1.51
CAST-226ENST00000509529 SPNS2Q8IVW8 549 aa5.62□□□□□ -1.51
CAST-226ENST00000509529 SGIP1Q9BQI5 828 aa5.61□□□□□ -1.51
CAST-226ENST00000509529 IFNL1Q8IU54 200 aa5.61□□□□□ -1.51
CAST-226ENST00000509529 PLCG2P16885 1265 aa5.6□□□□□ -1.51
CAST-226ENST00000509529 TMEM106CQ9BVX2 250 aa5.59□□□□□ -1.51
CAST-226ENST00000509529 IRX5P78411 483 aaPredicted RBP5.58□□□□□ -1.52
CAST-226ENST00000509529 MARVELD3Q96A59 401 aa5.58□□□□□ -1.52
CAST-226ENST00000509529 TMEM121BQ9BXQ6 578 aaPredicted RBP5.58□□□□□ -1.52
CAST-226ENST00000509529 NUBP1P53384 320 aa5.57□□□□□ -1.52
CAST-226ENST00000509529 PLCD3Q8N3E9 789 aa5.56□□□□□ -1.52
CAST-226ENST00000509529 OCEL1Q9H607 264 aa5.54□□□□□ -1.52
CAST-226ENST00000509529 SNPHO15079 494 aa5.52□□□□□ -1.53
CAST-226ENST00000509529 FAM212AQ96EL1 285 aa5.52□□□□□ -1.53
CAST-226ENST00000509529 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.52□□□□□ -1.53
CAST-226ENST00000509529 ZBTB47Q9UFB7 747 aaPredicted RBP5.51□□□□□ -1.53
CAST-226ENST00000509529 EMP3P54852 163 aa5.49□□□□□ -1.53
CAST-226ENST00000509529 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
CAST-226ENST00000509529 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
CAST-226ENST00000509529 POTEB3A0JP26 581 aa5.49□□□□□ -1.53
CAST-226ENST00000509529 POTEBQ6S5H4 581 aa5.49□□□□□ -1.53
CAST-226ENST00000509529 PYGBP11216 843 aa5.48□□□□□ -1.53
CAST-226ENST00000509529 PCDHB8Q9UN66 801 aa5.47□□□□□ -1.53
CAST-226ENST00000509529 PDCD7Q8N8D1 485 aaKnown RBP5.47□□□□□ -1.53
CAST-226ENST00000509529 HS3ST6Q96QI5 342 aa5.47□□□□□ -1.53
CAST-226ENST00000509529 FAM205CA6NFA0 338 aa5.46□□□□□ -1.54
CAST-226ENST00000509529 C3orf67Q6ZVT6 689 aa5.46□□□□□ -1.54
CAST-226ENST00000509529 DCAF8Q5TAQ9 597 aa5.44□□□□□ -1.54
CAST-226ENST00000509529 L3MBTL3Q96JM7 780 aaPredicted RBP5.4□□□□□ -1.54
CAST-226ENST00000509529 MKRN3Q13064 507 aaKnown RBP5.39□□□□□ -1.55
CAST-226ENST00000509529 GOLGA2Q08379 1002 aa5.39□□□□□ -1.55
CAST-226ENST00000509529 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.39□□□□□ -1.552e-8■■□□□ 13.1
CAST-226ENST00000509529 HOXB3P14651 431 aaPredicted RBP5.36□□□□□ -1.55
CAST-226ENST00000509529 ZNF467Q7Z7K2 595 aaPredicted RBP5.36□□□□□ -1.55
CAST-226ENST00000509529 DPY19L2Q6NUT2 758 aa5.36□□□□□ -1.55
CAST-226ENST00000509529 ILDR1Q86SU0 546 aaPredicted RBP5.35□□□□□ -1.55
CAST-226ENST00000509529 RNF166Q96A37 237 aaPredicted RBP5.34□□□□□ -1.55
CAST-226ENST00000509529 PSEN1P49768 467 aa5.34□□□□□ -1.56
CAST-226ENST00000509529 HOXB1P14653 301 aaPredicted RBP5.33□□□□□ -1.56
CAST-226ENST00000509529 ERBB3P21860 1342 aa5.32□□□□□ -1.56
CAST-226ENST00000509529 ZNF710Q8N1W2 664 aa5.32□□□□□ -1.56
CAST-226ENST00000509529 FKBP8Q14318 412 aa5.31□□□□□ -1.56
CAST-226ENST00000509529 BOLA1Q9Y3E2 137 aa5.31□□□□□ -1.56
CAST-226ENST00000509529 GSE1Q14687 1217 aa5.31□□□□□ -1.56
CAST-226ENST00000509529 MYT1LQ9UL68 1186 aa5.3□□□□□ -1.56
CAST-226ENST00000509529 VARS2Q5ST30 1063 aaKnown RBP5.29□□□□□ -1.56
CAST-226ENST00000509529 CHRM1P11229 460 aaPredicted RBP5.29□□□□□ -1.56
CAST-226ENST00000509529 CABP2Q9NPB3 220 aa5.29□□□□□ -1.56
CAST-226ENST00000509529 G3V3G9 751 aa5.28□□□□□ -1.56
CAST-226ENST00000509529 DOK7Q18PE1 504 aa5.28□□□□□ -1.56
CAST-226ENST00000509529 PDAP1Q13442 181 aaKnown RBP5.28□□□□□ -1.56
CAST-226ENST00000509529 KLHL34Q8N239 644 aa5.27□□□□□ -1.57
CAST-226ENST00000509529 FBXO3Q9UK99 471 aa5.25□□□□□ -1.57
CAST-226ENST00000509529 RIMBP2O15034 1052 aa5.25□□□□□ -1.57
CAST-226ENST00000509529 ZNF687Q8N1G0 1237 aa5.24□□□□□ -1.57
CAST-226ENST00000509529 VASPP50552 380 aaPredicted RBP5.23□□□□□ -1.57
CAST-226ENST00000509529 TMEM92Q6UXU6 159 aa5.23□□□□□ -1.57
CAST-226ENST00000509529 GPR153Q6NV75 609 aa5.22□□□□□ -1.57
CAST-226ENST00000509529 PTGER2P43116 358 aa5.21□□□□□ -1.58
CAST-226ENST00000509529 ZSWIM6Q9HCJ5 1215 aa5.2□□□□□ -1.58
CAST-226ENST00000509529 ANKRD13DQ6ZTN6 518 aa5.2□□□□□ -1.58
CAST-226ENST00000509529 MICALL2Q8IY33 904 aa5.2□□□□□ -1.58
CAST-226ENST00000509529 EFCAB3Q8N7B9 438 aa5.2□□□□□ -1.58
CAST-226ENST00000509529 CIZ1Q9ULV3 898 aaPredicted RBP5.17□□□□□ -1.58
CAST-226ENST00000509529 ARSIQ5FYB1 569 aa5.17□□□□□ -1.58
CAST-226ENST00000509529 LSM11P83369 360 aaKnown RBP eCLIP5.16□□□□□ -1.58
CAST-226ENST00000509529 KHSRPQ92945 711 aaKnown RBP eCLIP5.15□□□□□ -1.58
CAST-226ENST00000509529 ZNF316A6NFI3 1004 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms