RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
NFKB1-208ENST00000509165 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
NFKB1-208ENST00000509165 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
NFKB1-208ENST00000509165 MIER1Q8N108 512 aa12.66□□□□□ -0.38
NFKB1-208ENST00000509165 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
NFKB1-208ENST00000509165 LCE2DQ5TA82 110 aaPredicted RBP12.64□□□□□ -0.39
NFKB1-208ENST00000509165 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
NFKB1-208ENST00000509165 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
NFKB1-208ENST00000509165 ASTLQ6HA08 431 aaPredicted RBP12.59□□□□□ -0.39
NFKB1-208ENST00000509165 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
NFKB1-208ENST00000509165 C7P10643 843 aa12.57□□□□□ -0.4
NFKB1-208ENST00000509165 SLC39A7Q92504 469 aa12.57□□□□□ -0.4
NFKB1-208ENST00000509165 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
NFKB1-208ENST00000509165 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
NFKB1-208ENST00000509165 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
NFKB1-208ENST00000509165 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-208ENST00000509165 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
NFKB1-208ENST00000509165 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
NFKB1-208ENST00000509165 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-208ENST00000509165 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-208ENST00000509165 NUBP1P53384 320 aa12.43□□□□□ -0.42
NFKB1-208ENST00000509165 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
NFKB1-208ENST00000509165 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
NFKB1-208ENST00000509165 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
NFKB1-208ENST00000509165 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
NFKB1-208ENST00000509165 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
NFKB1-208ENST00000509165 SPOCK2Q92563 424 aa12.35□□□□□ -0.43
NFKB1-208ENST00000509165 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-208ENST00000509165 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
NFKB1-208ENST00000509165 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
NFKB1-208ENST00000509165 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
NFKB1-208ENST00000509165 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
NFKB1-208ENST00000509165 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
NFKB1-208ENST00000509165 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
NFKB1-208ENST00000509165 SEC24BO95487 1268 aa12.2□□□□□ -0.46
NFKB1-208ENST00000509165 GSE1Q14687 1217 aa12.19□□□□□ -0.46
NFKB1-208ENST00000509165 MAP3K13O43283 966 aa12.17□□□□□ -0.46
NFKB1-208ENST00000509165 TIE1P35590 1138 aa12.17□□□□□ -0.46
NFKB1-208ENST00000509165 ST18O60284 1047 aa12.16□□□□□ -0.46
NFKB1-208ENST00000509165 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
NFKB1-208ENST00000509165 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
NFKB1-208ENST00000509165 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
NFKB1-208ENST00000509165 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
NFKB1-208ENST00000509165 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-208ENST00000509165 PYGBP11216 843 aa12.09□□□□□ -0.47
NFKB1-208ENST00000509165 PKD2Q13563 968 aa12.08□□□□□ -0.48
NFKB1-208ENST00000509165 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
NFKB1-208ENST00000509165 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
NFKB1-208ENST00000509165 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
NFKB1-208ENST00000509165 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
NFKB1-208ENST00000509165 PCDHB13Q9Y5F0 798 aa12.02□□□□□ -0.49
NFKB1-208ENST00000509165 IER5LQ5T953 404 aa12.01□□□□□ -0.49
NFKB1-208ENST00000509165 IFNL1Q8IU54 200 aa12□□□□□ -0.49
NFKB1-208ENST00000509165 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-208ENST00000509165 ECM2O94769 699 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-208ENST00000509165 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
NFKB1-208ENST00000509165 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
NFKB1-208ENST00000509165 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
NFKB1-208ENST00000509165 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
NFKB1-208ENST00000509165 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
NFKB1-208ENST00000509165 PLCG2P16885 1265 aa11.9□□□□□ -0.5
NFKB1-208ENST00000509165 RGL2O15211 777 aa11.89□□□□□ -0.51
NFKB1-208ENST00000509165 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-208ENST00000509165 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
NFKB1-208ENST00000509165 TMEM106CQ9BVX2 250 aa11.86□□□□□ -0.51
NFKB1-208ENST00000509165 IRX5P78411 483 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-208ENST00000509165 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
NFKB1-208ENST00000509165 PSEN1P49768 467 aa11.82□□□□□ -0.52
NFKB1-208ENST00000509165 SNPHO15079 494 aa11.81□□□□□ -0.52
NFKB1-208ENST00000509165 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
NFKB1-208ENST00000509165 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
NFKB1-208ENST00000509165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-208ENST00000509165 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
NFKB1-208ENST00000509165 OCEL1Q9H607 264 aa11.75□□□□□ -0.53
NFKB1-208ENST00000509165 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
NFKB1-208ENST00000509165 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
NFKB1-208ENST00000509165 EMP3P54852 163 aa11.72□□□□□ -0.53
NFKB1-208ENST00000509165 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
NFKB1-208ENST00000509165 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
NFKB1-208ENST00000509165 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
NFKB1-208ENST00000509165 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
NFKB1-208ENST00000509165 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
NFKB1-208ENST00000509165 BCL11BQ9C0K0 894 aaPredicted RBP11.66□□□□□ -0.54
NFKB1-208ENST00000509165 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
NFKB1-208ENST00000509165 STK25O00506 426 aa11.64□□□□□ -0.55
NFKB1-208ENST00000509165 HS6ST3Q8IZP7 471 aa11.63□□□□□ -0.55
NFKB1-208ENST00000509165 STK24Q9Y6E0 443 aa11.63□□□□□ -0.55
NFKB1-208ENST00000509165 EFCAB3Q8N7B9 438 aa11.61□□□□□ -0.55
NFKB1-208ENST00000509165 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
NFKB1-208ENST00000509165 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
NFKB1-208ENST00000509165 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
NFKB1-208ENST00000509165 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
NFKB1-208ENST00000509165 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
NFKB1-208ENST00000509165 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
NFKB1-208ENST00000509165 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
NFKB1-208ENST00000509165 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
NFKB1-208ENST00000509165 SOX12O15370 315 aa11.54□□□□□ -0.56
NFKB1-208ENST00000509165 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.568e-7■□□□□ 8.8
NFKB1-208ENST00000509165 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-208ENST00000509165 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms