RNA–Protein interactions for RNA: ENST00000508837.1

SPDL1-208, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-208ENST00000508837 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
SPDL1-208ENST00000508837 MIER1Q8N108 512 aa12.16□□□□□ -0.46
SPDL1-208ENST00000508837 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
SPDL1-208ENST00000508837 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
SPDL1-208ENST00000508837 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
SPDL1-208ENST00000508837 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
SPDL1-208ENST00000508837 LCE2DQ5TA82 110 aaPredicted RBP12.06□□□□□ -0.48
SPDL1-208ENST00000508837 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
SPDL1-208ENST00000508837 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
SPDL1-208ENST00000508837 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
SPDL1-208ENST00000508837 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
SPDL1-208ENST00000508837 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
SPDL1-208ENST00000508837 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
SPDL1-208ENST00000508837 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
SPDL1-208ENST00000508837 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
SPDL1-208ENST00000508837 NUBP1P53384 320 aa11.96□□□□□ -0.49
SPDL1-208ENST00000508837 MAP3K13O43283 966 aa11.93□□□□□ -0.5
SPDL1-208ENST00000508837 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
SPDL1-208ENST00000508837 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
SPDL1-208ENST00000508837 C7P10643 843 aa11.88□□□□□ -0.51
SPDL1-208ENST00000508837 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
SPDL1-208ENST00000508837 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
SPDL1-208ENST00000508837 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
SPDL1-208ENST00000508837 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
SPDL1-208ENST00000508837 BMP2KQ9NSY1 1161 aaPredicted RBP11.86□□□□□ -0.51
SPDL1-208ENST00000508837 TIE1P35590 1138 aa11.84□□□□□ -0.51
SPDL1-208ENST00000508837 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
SPDL1-208ENST00000508837 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
SPDL1-208ENST00000508837 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
SPDL1-208ENST00000508837 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
SPDL1-208ENST00000508837 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
SPDL1-208ENST00000508837 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
SPDL1-208ENST00000508837 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
SPDL1-208ENST00000508837 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
SPDL1-208ENST00000508837 DCAF8Q5TAQ9 597 aa11.74□□□□□ -0.53
SPDL1-208ENST00000508837 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
SPDL1-208ENST00000508837 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
SPDL1-208ENST00000508837 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
SPDL1-208ENST00000508837 PYGBP11216 843 aa11.68□□□□□ -0.54
SPDL1-208ENST00000508837 RTN4Q9NQC3 1192 aaKnown RBP11.68□□□□□ -0.54
SPDL1-208ENST00000508837 IER5LQ5T953 404 aa11.67□□□□□ -0.54
SPDL1-208ENST00000508837 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
SPDL1-208ENST00000508837 COLQQ9Y215 455 aaPredicted RBP11.67□□□□□ -0.54
SPDL1-208ENST00000508837 TMEM106CQ9BVX2 250 aa11.65□□□□□ -0.54
SPDL1-208ENST00000508837 SEC24BO95487 1268 aa11.63□□□□□ -0.55
SPDL1-208ENST00000508837 GSE1Q14687 1217 aa11.62□□□□□ -0.55
SPDL1-208ENST00000508837 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
SPDL1-208ENST00000508837 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
SPDL1-208ENST00000508837 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
SPDL1-208ENST00000508837 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
SPDL1-208ENST00000508837 SPOCK2Q92563 424 aa11.53□□□□□ -0.56
SPDL1-208ENST00000508837 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SPDL1-208ENST00000508837 PLCG2P16885 1265 aa11.51□□□□□ -0.57
SPDL1-208ENST00000508837 MMRN1Q13201 1228 aa11.49□□□□□ -0.57
SPDL1-208ENST00000508837 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
SPDL1-208ENST00000508837 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
SPDL1-208ENST00000508837 ST18O60284 1047 aa11.46□□□□□ -0.57
SPDL1-208ENST00000508837 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
SPDL1-208ENST00000508837 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
SPDL1-208ENST00000508837 PSEN1P49768 467 aa11.42□□□□□ -0.58
SPDL1-208ENST00000508837 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
SPDL1-208ENST00000508837 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
SPDL1-208ENST00000508837 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
SPDL1-208ENST00000508837 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
SPDL1-208ENST00000508837 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
SPDL1-208ENST00000508837 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
SPDL1-208ENST00000508837 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
SPDL1-208ENST00000508837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
SPDL1-208ENST00000508837 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
SPDL1-208ENST00000508837 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
SPDL1-208ENST00000508837 CABP2Q9NPB3 220 aa11.28□□□□□ -0.6
SPDL1-208ENST00000508837 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
SPDL1-208ENST00000508837 SNPHO15079 494 aa11.23□□□□□ -0.61
SPDL1-208ENST00000508837 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
SPDL1-208ENST00000508837 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
SPDL1-208ENST00000508837 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
SPDL1-208ENST00000508837 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
SPDL1-208ENST00000508837 EFCAB3Q8N7B9 438 aa11.16□□□□□ -0.62
SPDL1-208ENST00000508837 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
SPDL1-208ENST00000508837 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
SPDL1-208ENST00000508837 NISCHQ9Y2I1 1504 aa11.13□□□□□ -0.63
SPDL1-208ENST00000508837 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
SPDL1-208ENST00000508837 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
SPDL1-208ENST00000508837 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
SPDL1-208ENST00000508837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
SPDL1-208ENST00000508837 G3V3G9 751 aa11.1□□□□□ -0.63
SPDL1-208ENST00000508837 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
SPDL1-208ENST00000508837 SOX12O15370 315 aa11.06□□□□□ -0.64
SPDL1-208ENST00000508837 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
SPDL1-208ENST00000508837 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
SPDL1-208ENST00000508837 MS4A4AQ96JQ5 239 aa11.02□□□□□ -0.65
SPDL1-208ENST00000508837 HOXB3P14651 431 aaPredicted RBP11□□□□□ -0.65
SPDL1-208ENST00000508837 MICALL2Q8IY33 904 aa11□□□□□ -0.65
SPDL1-208ENST00000508837 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
SPDL1-208ENST00000508837 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
SPDL1-208ENST00000508837 EMP3P54852 163 aa10.98□□□□□ -0.65
SPDL1-208ENST00000508837 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
SPDL1-208ENST00000508837 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
SPDL1-208ENST00000508837 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
SPDL1-208ENST00000508837 PKD2Q13563 968 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms