RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 FAM9BQ8IZU0 186 aa6.99□□□□□ -1.29
APC-208ENST00000508624 SLC4A1APQ9BWU0 796 aaKnown RBP6.99□□□□□ -1.29
APC-208ENST00000508624 MROH2BQ7Z745 1585 aa6.99□□□□□ -1.29
APC-208ENST00000508624 BECN1Q14457 450 aa6.98□□□□□ -1.29
APC-208ENST00000508624 SETD5Q9C0A6 1442 aa6.98□□□□□ -1.29
APC-208ENST00000508624 P3H3Q8IVL6 736 aa6.97□□□□□ -1.29
APC-208ENST00000508624 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
APC-208ENST00000508624 CECR2Q9BXF3 1484 aa6.97□□□□□ -1.29
APC-208ENST00000508624 SLC24A1O60721 1099 aa6.96□□□□□ -1.29
APC-208ENST00000508624 CCDC88BA6NC98 1476 aa6.96□□□□□ -1.3
APC-208ENST00000508624 WDR43Q15061 677 aaKnown RBP eCLIP6.95□□□□□ -1.3
APC-208ENST00000508624 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
APC-208ENST00000508624 WIZO95785 1651 aa6.95□□□□□ -1.3
APC-208ENST00000508624 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
APC-208ENST00000508624 ARHGAP35Q9NRY4 1499 aa6.94□□□□□ -1.3
APC-208ENST00000508624 SOGA1O94964 1423 aa6.94□□□□□ -1.3
APC-208ENST00000508624 ARID4BQ4LE39 1312 aaPredicted RBP6.93□□□□□ -1.3
APC-208ENST00000508624 TSPY4P0CV99 314 aa6.93□□□□□ -1.3
APC-208ENST00000508624 TSPY10P0CW01 314 aa6.93□□□□□ -1.3
APC-208ENST00000508624 HSP90AA1P07900 732 aaKnown RBP6.92□□□□□ -1.3
APC-208ENST00000508624 SMARCA4P51532 1647 aa6.92□□□□□ -1.3
APC-208ENST00000508624 NBR1Q14596 966 aa6.92□□□□□ -1.3
APC-208ENST00000508624 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
APC-208ENST00000508624 FMN1Q68DA7 1419 aa6.9□□□□□ -1.3
APC-208ENST00000508624 KIF21BO75037 1637 aa6.9□□□□□ -1.31
APC-208ENST00000508624 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
APC-208ENST00000508624 ZNF777Q9ULD5 760 aaPredicted RBP6.89□□□□□ -1.31
APC-208ENST00000508624 CARMIL1Q5VZK9 1371 aa6.89□□□□□ -1.31
APC-208ENST00000508624 GOLGA6L22H0YM25 854 aa6.88□□□□□ -1.31
APC-208ENST00000508624 MS4A1P11836 297 aa6.88□□□□□ -1.31
APC-208ENST00000508624 CHMP4BQ9H444 224 aaKnown RBP6.88□□□□□ -1.31
APC-208ENST00000508624 BCL11AQ9H165 835 aa6.87□□□□□ -1.31
APC-208ENST00000508624 ROCK2O75116 1388 aaKnown RBP6.87□□□□□ -1.31
APC-208ENST00000508624 RAB3GAP2Q9H2M9 1393 aa6.87□□□□□ -1.31
APC-208ENST00000508624 CUX2O14529 1486 aa6.86□□□□□ -1.31
APC-208ENST00000508624 TSHZ2Q9NRE2 1034 aa6.86□□□□□ -1.31
APC-208ENST00000508624 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
APC-208ENST00000508624 CFAP44Q96MT7 982 aa6.86□□□□□ -1.31
APC-208ENST00000508624 TCERG1O14776 1098 aaKnown RBP6.86□□□□□ -1.31
APC-208ENST00000508624 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
APC-208ENST00000508624 L1TD1Q5T7N2 865 aaKnown RBP6.85□□□□□ -1.31
APC-208ENST00000508624 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
APC-208ENST00000508624 DHX57Q6P158 1386 aaKnown RBP6.85□□□□□ -1.31
APC-208ENST00000508624 PTMSP20962 102 aa6.85□□□□□ -1.31
APC-208ENST00000508624 PHLDB1Q86UU1 1377 aa6.85□□□□□ -1.31
APC-208ENST00000508624 MYH16Q9H6N6 1097 aa6.85□□□□□ -1.31
APC-208ENST00000508624 FANCIQ9NVI1 1328 aa6.84□□□□□ -1.31
APC-208ENST00000508624 ERICH3Q5RHP9 1530 aa6.84□□□□□ -1.31
APC-208ENST00000508624 RRP7BPQ9NSQ0 103 aa6.84□□□□□ -1.31
APC-208ENST00000508624 PPP1R15AO75807 674 aaPredicted RBP6.84□□□□□ -1.32
APC-208ENST00000508624 IRX6P78412 446 aaPredicted RBP6.84□□□□□ -1.32
APC-208ENST00000508624 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
APC-208ENST00000508624 RALBP1Q15311 655 aa6.83□□□□□ -1.32
APC-208ENST00000508624 CFAP53Q96M91 514 aa6.83□□□□□ -1.32
APC-208ENST00000508624 RAPGEF2Q9Y4G8 1499 aa6.83□□□□□ -1.32
APC-208ENST00000508624 FBLN2P98095 1184 aa6.83□□□□□ -1.32
APC-208ENST00000508624 KNSTRNQ9Y448 316 aa6.83□□□□□ -1.32
APC-208ENST00000508624 PLEKHD1A6NEE1 506 aa6.82□□□□□ -1.32
APC-208ENST00000508624 DEKP35659 375 aaKnown RBP6.82□□□□□ -1.32
APC-208ENST00000508624 CARD11Q9BXL7 1154 aa6.82□□□□□ -1.32
APC-208ENST00000508624 SIN3AQ96ST3 1273 aa6.82□□□□□ -1.32
APC-208ENST00000508624 CFDP1Q9UEE9 299 aaPredicted RBP6.81□□□□□ -1.32
APC-208ENST00000508624 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
APC-208ENST00000508624 CUX1P39880 1505 aa6.81□□□□□ -1.32
APC-208ENST00000508624 NCLP19338 710 aaKnown RBP6.8□□□□□ -1.32
APC-208ENST00000508624 HIRIP3Q9BW71 556 aaPredicted RBP6.8□□□□□ -1.32
APC-208ENST00000508624 PNNQ9H307 717 aaKnown RBP6.8□□□□□ -1.32
APC-208ENST00000508624 NUDCQ9Y266 331 aa6.8□□□□□ -1.32
APC-208ENST00000508624 KTN1Q86UP2 1357 aaKnown RBP6.8□□□□□ -1.32
APC-208ENST00000508624 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
APC-208ENST00000508624 CASC1Q6TDU7 716 aa6.79□□□□□ -1.32
APC-208ENST00000508624 HSPA5P11021 654 aaKnown RBP6.78□□□□□ -1.32
APC-208ENST00000508624 TMF1P82094 1093 aa6.78□□□□□ -1.32
APC-208ENST00000508624 KDM2AQ9Y2K7 1162 aa6.78□□□□□ -1.32
APC-208ENST00000508624 ZBED9Q6R2W3 1325 aa6.78□□□□□ -1.32
APC-208ENST00000508624 B4GALNT3Q6L9W6 998 aa6.78□□□□□ -1.32
APC-208ENST00000508624 CCDC18Q5T9S5 1454 aa6.78□□□□□ -1.32
APC-208ENST00000508624 SALL2Q9Y467 1007 aaPredicted RBP6.78□□□□□ -1.32
APC-208ENST00000508624 ARID3CA6NKF2 412 aa6.77□□□□□ -1.33
APC-208ENST00000508624 CHMP7Q8WUX9 453 aaPredicted RBP6.77□□□□□ -1.33
APC-208ENST00000508624 ATAD2BQ9ULI0 1458 aa6.77□□□□□ -1.33
APC-208ENST00000508624 KANK4Q5T7N3 995 aaPredicted RBP6.77□□□□□ -1.33
APC-208ENST00000508624 RRBP1Q9P2E9 1410 aaKnown RBP6.76□□□□□ -1.33
APC-208ENST00000508624 NGEFQ8N5V2 710 aa6.76□□□□□ -1.33
APC-208ENST00000508624 HAP1P54257 671 aaPredicted RBP6.76□□□□□ -1.33
APC-208ENST00000508624 RCAN3Q9UKA8 241 aa6.76□□□□□ -1.33
APC-208ENST00000508624 KIF15Q9NS87 1388 aa6.75□□□□□ -1.33
APC-208ENST00000508624 FTSJ3Q8IY81 847 aaKnown RBP6.75□□□□□ -1.33
APC-208ENST00000508624 ANKRD30AQ9BXX3 1397 aa6.75□□□□□ -1.33
APC-208ENST00000508624 RSPH4AQ5TD94 716 aa6.74□□□□□ -1.33
APC-208ENST00000508624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.74□□□□□ -1.33
APC-208ENST00000508624 NLRP13Q86W25 1043 aa6.74□□□□□ -1.33
APC-208ENST00000508624 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
APC-208ENST00000508624 NPM1P06748 294 aaKnown RBP eCLIP6.74□□□□□ -1.33
APC-208ENST00000508624 HSCBQ8IWL3 235 aa6.74□□□□□ -1.33
APC-208ENST00000508624 CARMIL2Q6F5E8 1435 aa6.74□□□□□ -1.33
APC-208ENST00000508624 UACAQ9BZF9 1416 aa6.73□□□□□ -1.33
APC-208ENST00000508624 KANK1Q14678 1352 aa6.73□□□□□ -1.33
APC-208ENST00000508624 PDS5BQ9NTI5 1447 aa6.73□□□□□ -1.33
APC-208ENST00000508624 EFCAB5A4FU69 1503 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms