RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 DSG3P32926 999 aa14.01□□□□□ -0.17
CCDC149-206ENST00000508236 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
CCDC149-206ENST00000508236 TULP1O00294 542 aaPredicted RBP14□□□□□ -0.17
CCDC149-206ENST00000508236 GSE1Q14687 1217 aa13.99□□□□□ -0.17
CCDC149-206ENST00000508236 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
CCDC149-206ENST00000508236 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
CCDC149-206ENST00000508236 GTPBP6O43824 516 aaPredicted RBP13.93□□□□□ -0.18
CCDC149-206ENST00000508236 RIOK3O14730 519 aaKnown RBP13.91□□□□□ -0.18
CCDC149-206ENST00000508236 NUBP1P53384 320 aa13.86□□□□□ -0.19
CCDC149-206ENST00000508236 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
CCDC149-206ENST00000508236 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
CCDC149-206ENST00000508236 STK25O00506 426 aa13.82□□□□□ -0.2
CCDC149-206ENST00000508236 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
CCDC149-206ENST00000508236 VGFO15240 615 aaPredicted RBP13.79□□□□□ -0.2
CCDC149-206ENST00000508236 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
CCDC149-206ENST00000508236 ARXQ96QS3 562 aa13.74□□□□□ -0.21
CCDC149-206ENST00000508236 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
CCDC149-206ENST00000508236 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CCDC149-206ENST00000508236 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
CCDC149-206ENST00000508236 SGIP1Q9BQI5 828 aa13.7□□□□□ -0.22
CCDC149-206ENST00000508236 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
CCDC149-206ENST00000508236 STK24Q9Y6E0 443 aa13.69□□□□□ -0.22
CCDC149-206ENST00000508236 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
CCDC149-206ENST00000508236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
CCDC149-206ENST00000508236 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
CCDC149-206ENST00000508236 C14orf37Q86TY3 774 aa13.58□□□□□ -0.24
CCDC149-206ENST00000508236 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
CCDC149-206ENST00000508236 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
CCDC149-206ENST00000508236 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
CCDC149-206ENST00000508236 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
CCDC149-206ENST00000508236 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
CCDC149-206ENST00000508236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCDC149-206ENST00000508236 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
CCDC149-206ENST00000508236 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
CCDC149-206ENST00000508236 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
CCDC149-206ENST00000508236 KCNV2Q8TDN2 545 aa13.53□□□□□ -0.24
CCDC149-206ENST00000508236 PYGBP11216 843 aa13.51□□□□□ -0.25
CCDC149-206ENST00000508236 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
CCDC149-206ENST00000508236 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
CCDC149-206ENST00000508236 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
CCDC149-206ENST00000508236 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
CCDC149-206ENST00000508236 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
CCDC149-206ENST00000508236 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
CCDC149-206ENST00000508236 AKT1S1Q96B36 256 aa13.39□□□□□ -0.27
CCDC149-206ENST00000508236 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
CCDC149-206ENST00000508236 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
CCDC149-206ENST00000508236 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.28
CCDC149-206ENST00000508236 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.28
CCDC149-206ENST00000508236 NEUROD2Q15784 382 aa13.3□□□□□ -0.28
CCDC149-206ENST00000508236 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
CCDC149-206ENST00000508236 MYT1Q01538 1121 aa13.29□□□□□ -0.28
CCDC149-206ENST00000508236 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
CCDC149-206ENST00000508236 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
CCDC149-206ENST00000508236 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
CCDC149-206ENST00000508236 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
CCDC149-206ENST00000508236 SLC24A3Q9HC58 644 aa13.25□□□□□ -0.29
CCDC149-206ENST00000508236 E2F4Q16254 413 aa13.24□□□□□ -0.29
CCDC149-206ENST00000508236 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-206ENST00000508236 SEMA3EO15041 775 aa13.21□□□□□ -0.29
CCDC149-206ENST00000508236 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
CCDC149-206ENST00000508236 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
CCDC149-206ENST00000508236 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
CCDC149-206ENST00000508236 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
CCDC149-206ENST00000508236 PSEN1P49768 467 aa13.17□□□□□ -0.3
CCDC149-206ENST00000508236 PPP1R37O75864 691 aa13.16□□□□□ -0.3
CCDC149-206ENST00000508236 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
CCDC149-206ENST00000508236 ZMYND10O75800 440 aa13.13□□□□□ -0.31
CCDC149-206ENST00000508236 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
CCDC149-206ENST00000508236 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
CCDC149-206ENST00000508236 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
CCDC149-206ENST00000508236 NLRP6P59044 892 aa13.1□□□□□ -0.31
CCDC149-206ENST00000508236 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
CCDC149-206ENST00000508236 SOX12O15370 315 aa13.05□□□□□ -0.32
CCDC149-206ENST00000508236 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
CCDC149-206ENST00000508236 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
CCDC149-206ENST00000508236 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
CCDC149-206ENST00000508236 PHF8Q9UPP1 1060 aa13.03□□□□□ -0.32
CCDC149-206ENST00000508236 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
CCDC149-206ENST00000508236 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.33
CCDC149-206ENST00000508236 LARP6Q9BRS8 491 aaKnown RBP13.01□□□□□ -0.33
CCDC149-206ENST00000508236 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
CCDC149-206ENST00000508236 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
CCDC149-206ENST00000508236 PDE4AP27815 886 aa13□□□□□ -0.33
CCDC149-206ENST00000508236 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
CCDC149-206ENST00000508236 MFSD10Q14728 455 aa12.97□□□□□ -0.33
CCDC149-206ENST00000508236 AK7Q96M32 723 aa12.97□□□□□ -0.33
CCDC149-206ENST00000508236 IFNL1Q8IU54 200 aa12.96□□□□□ -0.33
CCDC149-206ENST00000508236 ABCC9O60706 1549 aa12.96□□□□□ -0.33
CCDC149-206ENST00000508236 NACADO15069 1562 aa12.94□□□□□ -0.34
CCDC149-206ENST00000508236 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
CCDC149-206ENST00000508236 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
CCDC149-206ENST00000508236 CRISPLD2Q9H0B8 497 aa12.92□□□□□ -0.34
CCDC149-206ENST00000508236 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
CCDC149-206ENST00000508236 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
CCDC149-206ENST00000508236 CAMK2BQ13554 666 aa12.89□□□□□ -0.35
CCDC149-206ENST00000508236 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
CCDC149-206ENST00000508236 ZMYND15Q9H091 742 aa12.89□□□□□ -0.35
CCDC149-206ENST00000508236 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
CCDC149-206ENST00000508236 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
CCDC149-206ENST00000508236 MAP3K13O43283 966 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms