RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
PFDN1-202ENST00000507185 GALR2O43603 387 aaPredicted RBP18.46■□□□□ 0.55
PFDN1-202ENST00000507185 DCBLD2Q96PD2 775 aa18.42■□□□□ 0.54
PFDN1-202ENST00000507185 FAM212AQ96EL1 285 aa18.41■□□□□ 0.54
PFDN1-202ENST00000507185 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
PFDN1-202ENST00000507185 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
PFDN1-202ENST00000507185 KIF12Q96FN5 646 aa18.34■□□□□ 0.53
PFDN1-202ENST00000507185 MS4A3Q96HJ5 214 aa18.34■□□□□ 0.53
PFDN1-202ENST00000507185 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
PFDN1-202ENST00000507185 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
PFDN1-202ENST00000507185 MAP3K13O43283 966 aa18.27■□□□□ 0.52
PFDN1-202ENST00000507185 SPOCK2Q92563 424 aa18.23■□□□□ 0.51
PFDN1-202ENST00000507185 GSE1Q14687 1217 aa18.2■□□□□ 0.5
PFDN1-202ENST00000507185 PCDHB13Q9Y5F0 798 aa18.17■□□□□ 0.5
PFDN1-202ENST00000507185 SGIP1Q9BQI5 828 aa18.16■□□□□ 0.5
PFDN1-202ENST00000507185 PYGBP11216 843 aa18.14■□□□□ 0.49
PFDN1-202ENST00000507185 ASTLQ6HA08 431 aaPredicted RBP18.1■□□□□ 0.49
PFDN1-202ENST00000507185 ATMINO43313 823 aaPredicted RBP18.09■□□□□ 0.49
PFDN1-202ENST00000507185 TRPC6Q9Y210 931 aa18.08■□□□□ 0.48
PFDN1-202ENST00000507185 CIZ1Q9ULV3 898 aaPredicted RBP18.07■□□□□ 0.48
PFDN1-202ENST00000507185 IFNL1Q8IU54 200 aa18.06■□□□□ 0.48
PFDN1-202ENST00000507185 TIE1P35590 1138 aa18.04■□□□□ 0.48
PFDN1-202ENST00000507185 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
PFDN1-202ENST00000507185 BMP2KQ9NSY1 1161 aaPredicted RBP18.03■□□□□ 0.48
PFDN1-202ENST00000507185 LHX8Q68G74 356 aa18.02■□□□□ 0.48
PFDN1-202ENST00000507185 ATN1P54259 1190 aaPredicted RBP18■□□□□ 0.47
PFDN1-202ENST00000507185 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
PFDN1-202ENST00000507185 TTLL13PA6NNM8 815 aa17.95■□□□□ 0.46
PFDN1-202ENST00000507185 SLC39A7Q92504 469 aa17.95■□□□□ 0.46
PFDN1-202ENST00000507185 PCDHB8Q9UN66 801 aa17.94■□□□□ 0.46
PFDN1-202ENST00000507185 C7P10643 843 aa17.92■□□□□ 0.46
PFDN1-202ENST00000507185 METRNQ9UJH8 293 aa17.91■□□□□ 0.46
PFDN1-202ENST00000507185 ZNF467Q7Z7K2 595 aaPredicted RBP17.9■□□□□ 0.46
PFDN1-202ENST00000507185 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
PFDN1-202ENST00000507185 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
PFDN1-202ENST00000507185 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
PFDN1-202ENST00000507185 POTEB2H3BUK9 544 aa17.75■□□□□ 0.43
PFDN1-202ENST00000507185 SEC24BO95487 1268 aa17.74■□□□□ 0.43
PFDN1-202ENST00000507185 IER5LQ5T953 404 aa17.74■□□□□ 0.43
PFDN1-202ENST00000507185 PSEN1P49768 467 aa17.72■□□□□ 0.43
PFDN1-202ENST00000507185 PDAP1Q13442 181 aaKnown RBP17.69■□□□□ 0.42
PFDN1-202ENST00000507185 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
PFDN1-202ENST00000507185 COLQQ9Y215 455 aaPredicted RBP17.66■□□□□ 0.42
PFDN1-202ENST00000507185 GOLGA2Q08379 1002 aa17.64■□□□□ 0.41
PFDN1-202ENST00000507185 OTUD5Q96G74 571 aa17.6■□□□□ 0.41
PFDN1-202ENST00000507185 PLCG2P16885 1265 aa17.59■□□□□ 0.41
PFDN1-202ENST00000507185 RIOK3O14730 519 aaKnown RBP17.57■□□□□ 0.4
PFDN1-202ENST00000507185 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
PFDN1-202ENST00000507185 MKRN3Q13064 507 aaKnown RBP17.57■□□□□ 0.4
PFDN1-202ENST00000507185 MAMSTRQ6ZN01 415 aa17.57■□□□□ 0.4
PFDN1-202ENST00000507185 IRX5P78411 483 aaPredicted RBP17.56■□□□□ 0.4
PFDN1-202ENST00000507185 RNF25Q96BH1 459 aaPredicted RBP17.54■□□□□ 0.4
PFDN1-202ENST00000507185 OCEL1Q9H607 264 aa17.54■□□□□ 0.4
PFDN1-202ENST00000507185 ECM2O94769 699 aaPredicted RBP17.53■□□□□ 0.4
PFDN1-202ENST00000507185 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
PFDN1-202ENST00000507185 SCUBE2Q9NQ36 999 aa17.51■□□□□ 0.39
PFDN1-202ENST00000507185 PKD2Q13563 968 aa17.49■□□□□ 0.39
PFDN1-202ENST00000507185 VGFO15240 615 aaPredicted RBP17.47■□□□□ 0.39
PFDN1-202ENST00000507185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.38
PFDN1-202ENST00000507185 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
PFDN1-202ENST00000507185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.42■□□□□ 0.38
PFDN1-202ENST00000507185 ZFP91Q96JP5 570 aaPredicted RBP17.42■□□□□ 0.38
PFDN1-202ENST00000507185 PDCD7Q8N8D1 485 aaKnown RBP17.37■□□□□ 0.37
PFDN1-202ENST00000507185 EFCAB3Q8N7B9 438 aa17.35■□□□□ 0.37
PFDN1-202ENST00000507185 RGL2O15211 777 aa17.33■□□□□ 0.36
PFDN1-202ENST00000507185 ILDR1Q86SU0 546 aaPredicted RBP17.3■□□□□ 0.36
PFDN1-202ENST00000507185 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
PFDN1-202ENST00000507185 BCL11BQ9C0K0 894 aaPredicted RBP17.28■□□□□ 0.36
PFDN1-202ENST00000507185 STK24Q9Y6E0 443 aa17.25■□□□□ 0.35
PFDN1-202ENST00000507185 STK25O00506 426 aa17.24■□□□□ 0.35
PFDN1-202ENST00000507185 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
PFDN1-202ENST00000507185 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
PFDN1-202ENST00000507185 SOX12O15370 315 aa17.22■□□□□ 0.35
PFDN1-202ENST00000507185 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.22■□□□□ 0.35
PFDN1-202ENST00000507185 G3V3G9 751 aa17.19■□□□□ 0.34
PFDN1-202ENST00000507185 C3orf67Q6ZVT6 689 aa17.19■□□□□ 0.34
PFDN1-202ENST00000507185 PHF8Q9UPP1 1060 aa17.14■□□□□ 0.33
PFDN1-202ENST00000507185 BOLA1Q9Y3E2 137 aa17.14■□□□□ 0.33
PFDN1-202ENST00000507185 NLRP6P59044 892 aa17.09■□□□□ 0.33
PFDN1-202ENST00000507185 FAM163AQ96GL9 167 aaPredicted RBP17.09■□□□□ 0.33
PFDN1-202ENST00000507185 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
PFDN1-202ENST00000507185 MFRPQ9BY79 579 aa17.02■□□□□ 0.32
PFDN1-202ENST00000507185 ABCC9O60706 1549 aa17.01■□□□□ 0.31
PFDN1-202ENST00000507185 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
PFDN1-202ENST00000507185 TMEM121BQ9BXQ6 578 aaPredicted RBP17■□□□□ 0.31
PFDN1-202ENST00000507185 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
PFDN1-202ENST00000507185 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
PFDN1-202ENST00000507185 HS6ST3Q8IZP7 471 aa16.98■□□□□ 0.31
PFDN1-202ENST00000507185 SNPHO15079 494 aa16.97■□□□□ 0.31
PFDN1-202ENST00000507185 POTEMA6NI47 508 aa16.93■□□□□ 0.3
PFDN1-202ENST00000507185 LCE2DQ5TA82 110 aaPredicted RBP16.93■□□□□ 0.3
PFDN1-202ENST00000507185 POTEGQ6S5H5 508 aa16.91■□□□□ 0.3
PFDN1-202ENST00000507185 ST18O60284 1047 aa16.87■□□□□ 0.29
PFDN1-202ENST00000507185 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
PFDN1-202ENST00000507185 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
PFDN1-202ENST00000507185 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
PFDN1-202ENST00000507185 PPP1R37O75864 691 aa16.74■□□□□ 0.27
PFDN1-202ENST00000507185 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
PFDN1-202ENST00000507185 NKX1-1Q15270 411 aaPredicted RBP16.72■□□□□ 0.27
PFDN1-202ENST00000507185 HOXB3P14651 431 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms