RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
CLDND1-212ENST00000506885 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
CLDND1-212ENST00000506885 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
CLDND1-212ENST00000506885 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
CLDND1-212ENST00000506885 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLDND1-212ENST00000506885 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
CLDND1-212ENST00000506885 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
CLDND1-212ENST00000506885 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
CLDND1-212ENST00000506885 VASPP50552 380 aaPredicted RBP11.13□□□□□ -0.63
CLDND1-212ENST00000506885 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
CLDND1-212ENST00000506885 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
CLDND1-212ENST00000506885 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
CLDND1-212ENST00000506885 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
CLDND1-212ENST00000506885 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
CLDND1-212ENST00000506885 C7P10643 843 aa11.03□□□□□ -0.64
CLDND1-212ENST00000506885 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
CLDND1-212ENST00000506885 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
CLDND1-212ENST00000506885 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
CLDND1-212ENST00000506885 POTEJP0CG39 1038 aa10.98□□□□□ -0.65
CLDND1-212ENST00000506885 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
CLDND1-212ENST00000506885 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
CLDND1-212ENST00000506885 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
CLDND1-212ENST00000506885 NUBP1P53384 320 aa10.92□□□□□ -0.66
CLDND1-212ENST00000506885 ASTLQ6HA08 431 aaPredicted RBP10.92□□□□□ -0.66
CLDND1-212ENST00000506885 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
CLDND1-212ENST00000506885 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
CLDND1-212ENST00000506885 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
CLDND1-212ENST00000506885 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
CLDND1-212ENST00000506885 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
CLDND1-212ENST00000506885 GSE1Q14687 1217 aa10.86□□□□□ -0.67
CLDND1-212ENST00000506885 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
CLDND1-212ENST00000506885 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
CLDND1-212ENST00000506885 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
CLDND1-212ENST00000506885 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
CLDND1-212ENST00000506885 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-212ENST00000506885 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
CLDND1-212ENST00000506885 BMP2KQ9NSY1 1161 aaPredicted RBP10.76□□□□□ -0.69
CLDND1-212ENST00000506885 MAP3K13O43283 966 aa10.75□□□□□ -0.69
CLDND1-212ENST00000506885 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
CLDND1-212ENST00000506885 TRPC6Q9Y210 931 aa10.75□□□□□ -0.69
CLDND1-212ENST00000506885 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
CLDND1-212ENST00000506885 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
CLDND1-212ENST00000506885 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.69
CLDND1-212ENST00000506885 TIE1P35590 1138 aa10.7□□□□□ -0.7
CLDND1-212ENST00000506885 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
CLDND1-212ENST00000506885 ST18O60284 1047 aa10.68□□□□□ -0.7
CLDND1-212ENST00000506885 PYGBP11216 843 aa10.67□□□□□ -0.7
CLDND1-212ENST00000506885 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
CLDND1-212ENST00000506885 SEC24BO95487 1268 aa10.66□□□□□ -0.7
CLDND1-212ENST00000506885 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
CLDND1-212ENST00000506885 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
CLDND1-212ENST00000506885 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
CLDND1-212ENST00000506885 TRIM35Q9UPQ4 493 aa10.6□□□□□ -0.71
CLDND1-212ENST00000506885 IFNL1Q8IU54 200 aa10.58□□□□□ -0.72
CLDND1-212ENST00000506885 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
CLDND1-212ENST00000506885 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-212ENST00000506885 IER5LQ5T953 404 aa10.56□□□□□ -0.72
CLDND1-212ENST00000506885 TAOK2Q9UL54 1235 aa10.53□□□□□ -0.72
CLDND1-212ENST00000506885 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-212ENST00000506885 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
CLDND1-212ENST00000506885 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
CLDND1-212ENST00000506885 PDAP1Q13442 181 aaKnown RBP10.49□□□□□ -0.73
CLDND1-212ENST00000506885 PKD2Q13563 968 aa10.49□□□□□ -0.73
CLDND1-212ENST00000506885 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
CLDND1-212ENST00000506885 PLCG2P16885 1265 aa10.47□□□□□ -0.73
CLDND1-212ENST00000506885 PSEN1P49768 467 aa10.46□□□□□ -0.73
CLDND1-212ENST00000506885 SNPHO15079 494 aa10.44□□□□□ -0.74
CLDND1-212ENST00000506885 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
CLDND1-212ENST00000506885 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
CLDND1-212ENST00000506885 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
CLDND1-212ENST00000506885 MARVELD3Q96A59 401 aa10.4□□□□□ -0.74
CLDND1-212ENST00000506885 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-212ENST00000506885 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
CLDND1-212ENST00000506885 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
CLDND1-212ENST00000506885 RGL2O15211 777 aa10.35□□□□□ -0.75
CLDND1-212ENST00000506885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-212ENST00000506885 ZFP91Q96JP5 570 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-212ENST00000506885 EMP3P54852 163 aa10.31□□□□□ -0.76
CLDND1-212ENST00000506885 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
CLDND1-212ENST00000506885 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
CLDND1-212ENST00000506885 STK25O00506 426 aa10.28□□□□□ -0.76
CLDND1-212ENST00000506885 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
CLDND1-212ENST00000506885 KRTAP3-2Q9BYR7 98 aa10.28□□□□□ -0.76
CLDND1-212ENST00000506885 BCL11BQ9C0K0 894 aaPredicted RBP10.27□□□□□ -0.77
CLDND1-212ENST00000506885 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
CLDND1-212ENST00000506885 SOX12O15370 315 aa10.25□□□□□ -0.77
CLDND1-212ENST00000506885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLDND1-212ENST00000506885 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
CLDND1-212ENST00000506885 HS3ST6Q96QI5 342 aa10.23□□□□□ -0.77
CLDND1-212ENST00000506885 EFCAB3Q8N7B9 438 aa10.22□□□□□ -0.77
CLDND1-212ENST00000506885 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
CLDND1-212ENST00000506885 RNF166Q96A37 237 aaPredicted RBP10.22□□□□□ -0.77
CLDND1-212ENST00000506885 HS6ST3Q8IZP7 471 aa10.21□□□□□ -0.77
CLDND1-212ENST00000506885 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
CLDND1-212ENST00000506885 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
CLDND1-212ENST00000506885 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
CLDND1-212ENST00000506885 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
CLDND1-212ENST00000506885 CHGAP10645 457 aaKnown RBP10.18□□□□□ -0.78
CLDND1-212ENST00000506885 NLRP6P59044 892 aa10.17□□□□□ -0.78
CLDND1-212ENST00000506885 G3V3G9 751 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms