RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 DCAF1Q9Y4B6 1507 aa21.52■■□□□ 1.04
SH3TC1-210ENST00000506360 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.03
SH3TC1-210ENST00000506360 RRP7BPQ9NSQ0 103 aa21.49■■□□□ 1.03
SH3TC1-210ENST00000506360 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
SH3TC1-210ENST00000506360 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
SH3TC1-210ENST00000506360 CDK11BP21127 795 aaKnown RBP21.44■■□□□ 1.02
SH3TC1-210ENST00000506360 CLIP1P30622 1438 aa21.4■■□□□ 1.02
SH3TC1-210ENST00000506360 GLIPR1L2Q4G1C9 344 aa21.4■■□□□ 1.02
SH3TC1-210ENST00000506360 MIER1Q8N108 512 aa21.39■■□□□ 1.02
SH3TC1-210ENST00000506360 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
SH3TC1-210ENST00000506360 PLEKHD1A6NEE1 506 aa21.35■■□□□ 1.01
SH3TC1-210ENST00000506360 HAP1P54257 671 aaPredicted RBP21.34■■□□□ 1.01
SH3TC1-210ENST00000506360 NCLP19338 710 aaKnown RBP21.33■■□□□ 1.01
SH3TC1-210ENST00000506360 BECN1Q14457 450 aa21.33■■□□□ 1.01
SH3TC1-210ENST00000506360 CFAP53Q96M91 514 aa21.32■■□□□ 1
SH3TC1-210ENST00000506360 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
SH3TC1-210ENST00000506360 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
SH3TC1-210ENST00000506360 ARID4BQ4LE39 1312 aaPredicted RBP21.3■■□□□ 1
SH3TC1-210ENST00000506360 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
SH3TC1-210ENST00000506360 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
SH3TC1-210ENST00000506360 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
SH3TC1-210ENST00000506360 KNSTRNQ9Y448 316 aa21.26■□□□□ 0.99
SH3TC1-210ENST00000506360 GOLGA6L22H0YM25 854 aa21.24■□□□□ 0.99
SH3TC1-210ENST00000506360 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
SH3TC1-210ENST00000506360 TRIM44Q96DX7 344 aaPredicted RBP21.21■□□□□ 0.99
SH3TC1-210ENST00000506360 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
SH3TC1-210ENST00000506360 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
SH3TC1-210ENST00000506360 CASC1Q6TDU7 716 aa21.2■□□□□ 0.98
SH3TC1-210ENST00000506360 CARD11Q9BXL7 1154 aa21.19■□□□□ 0.98
SH3TC1-210ENST00000506360 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
SH3TC1-210ENST00000506360 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
SH3TC1-210ENST00000506360 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
SH3TC1-210ENST00000506360 ZRSR1Q15695 479 aaKnown RBP21.17■□□□□ 0.98
SH3TC1-210ENST00000506360 TPRNQ4KMQ1 711 aa21.16■□□□□ 0.98
SH3TC1-210ENST00000506360 MAPK8IP3Q9UPT6 1336 aa21.16■□□□□ 0.98
SH3TC1-210ENST00000506360 ANP32EQ9BTT0 268 aa21.15■□□□□ 0.98
SH3TC1-210ENST00000506360 CEP162Q5TB80 1403 aa21.14■□□□□ 0.97
SH3TC1-210ENST00000506360 LMOD2Q6P5Q4 547 aa21.13■□□□□ 0.97
SH3TC1-210ENST00000506360 POGKQ9P215 609 aa21.12■□□□□ 0.97
SH3TC1-210ENST00000506360 PTMAP06454 111 aaKnown RBP21.1■□□□□ 0.97
SH3TC1-210ENST00000506360 NUDCQ9Y266 331 aa21.1■□□□□ 0.97
SH3TC1-210ENST00000506360 TULP1O00294 542 aaPredicted RBP21.09■□□□□ 0.97
SH3TC1-210ENST00000506360 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
SH3TC1-210ENST00000506360 EEA1Q15075 1411 aa21.08■□□□□ 0.96
SH3TC1-210ENST00000506360 TNNT2P45379 298 aaPredicted RBP21.07■□□□□ 0.96
SH3TC1-210ENST00000506360 NPHP1O15259 732 aa21.05■□□□□ 0.96
SH3TC1-210ENST00000506360 FRAT1Q92837 279 aaPredicted RBP21.05■□□□□ 0.96
SH3TC1-210ENST00000506360 TAOK2Q9UL54 1235 aa21.03■□□□□ 0.96
SH3TC1-210ENST00000506360 CC2D1BQ5T0F9 858 aaKnown RBP21.02■□□□□ 0.95
SH3TC1-210ENST00000506360 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
SH3TC1-210ENST00000506360 RGS3P49796 1198 aa21.01■□□□□ 0.95
SH3TC1-210ENST00000506360 KIF27Q86VH2 1401 aa21■□□□□ 0.95
SH3TC1-210ENST00000506360 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
SH3TC1-210ENST00000506360 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
SH3TC1-210ENST00000506360 DNTTIP2Q5QJE6 756 aaKnown RBP21■□□□□ 0.95
SH3TC1-210ENST00000506360 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
SH3TC1-210ENST00000506360 SIN3AQ96ST3 1273 aa20.96■□□□□ 0.95
SH3TC1-210ENST00000506360 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
SH3TC1-210ENST00000506360 CHMP4BQ9H444 224 aaKnown RBP20.94■□□□□ 0.94
SH3TC1-210ENST00000506360 FGD1P98174 961 aa20.94■□□□□ 0.94
SH3TC1-210ENST00000506360 PLCB2Q00722 1185 aa20.92■□□□□ 0.94
SH3TC1-210ENST00000506360 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
SH3TC1-210ENST00000506360 ERCC6Q03468 1493 aa20.91■□□□□ 0.94
SH3TC1-210ENST00000506360 HSP90AB1P08238 724 aaKnown RBP20.91■□□□□ 0.94
SH3TC1-210ENST00000506360 PNNQ9H307 717 aaKnown RBP20.91■□□□□ 0.94
SH3TC1-210ENST00000506360 KCNJ4P48050 445 aa20.9■□□□□ 0.94
SH3TC1-210ENST00000506360 PPP4R2Q9NY27 417 aa20.9■□□□□ 0.94
SH3TC1-210ENST00000506360 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
SH3TC1-210ENST00000506360 MS4A1P11836 297 aa20.9■□□□□ 0.94
SH3TC1-210ENST00000506360 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
SH3TC1-210ENST00000506360 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
SH3TC1-210ENST00000506360 GOLGA2Q08379 1002 aa20.88■□□□□ 0.93
SH3TC1-210ENST00000506360 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
SH3TC1-210ENST00000506360 TNIKQ9UKE5 1360 aa20.88■□□□□ 0.93
SH3TC1-210ENST00000506360 TMF1P82094 1093 aa20.88■□□□□ 0.93
SH3TC1-210ENST00000506360 SOX12O15370 315 aa20.86■□□□□ 0.93
SH3TC1-210ENST00000506360 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
SH3TC1-210ENST00000506360 KANK1Q14678 1352 aa20.85■□□□□ 0.93
SH3TC1-210ENST00000506360 MLECQ14165 292 aa20.84■□□□□ 0.93
SH3TC1-210ENST00000506360 GOLGA6L6A8MZA4 724 aa20.83■□□□□ 0.93
SH3TC1-210ENST00000506360 SRPK2P78362 688 aaKnown RBP20.83■□□□□ 0.93
SH3TC1-210ENST00000506360 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
SH3TC1-210ENST00000506360 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
SH3TC1-210ENST00000506360 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
SH3TC1-210ENST00000506360 HDGFP51858 240 aaKnown RBP20.79■□□□□ 0.92
SH3TC1-210ENST00000506360 NAP1L5Q96NT1 182 aaPredicted RBP20.79■□□□□ 0.92
SH3TC1-210ENST00000506360 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
SH3TC1-210ENST00000506360 MORC1Q86VD1 984 aa20.78■□□□□ 0.92
SH3TC1-210ENST00000506360 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
SH3TC1-210ENST00000506360 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.91
SH3TC1-210ENST00000506360 GOLGA6L4A6NEF3 574 aa20.76■□□□□ 0.91
SH3TC1-210ENST00000506360 HSCBQ8IWL3 235 aa20.75■□□□□ 0.91
SH3TC1-210ENST00000506360 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
SH3TC1-210ENST00000506360 NRDCO43847 1150 aa20.72■□□□□ 0.91
SH3TC1-210ENST00000506360 RTF1Q92541 710 aaKnown RBP20.72■□□□□ 0.91
SH3TC1-210ENST00000506360 MCCP23508 829 aa20.72■□□□□ 0.91
SH3TC1-210ENST00000506360 RTN4Q9NQC3 1192 aaKnown RBP20.71■□□□□ 0.91
SH3TC1-210ENST00000506360 STK26Q9P289 416 aa20.69■□□□□ 0.9
SH3TC1-210ENST00000506360 SPRYD3Q8NCJ5 442 aa20.67■□□□□ 0.9
SH3TC1-210ENST00000506360 CLSTN1O94985 981 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms