RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
CDH9-203ENST00000505045 DCAF8L2P0C7V8 631 aa10.14□□□□□ -0.79
CDH9-203ENST00000505045 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
CDH9-203ENST00000505045 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
CDH9-203ENST00000505045 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
CDH9-203ENST00000505045 MMRN1Q13201 1228 aa10.1□□□□□ -0.79
CDH9-203ENST00000505045 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDH9-203ENST00000505045 METRNQ9UJH8 293 aa10.07□□□□□ -0.8
CDH9-203ENST00000505045 BICRAQ9NZM4 1560 aa10.06□□□□□ -0.8
CDH9-203ENST00000505045 DCAF1Q9Y4B6 1507 aa10.04□□□□□ -0.8
CDH9-203ENST00000505045 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
CDH9-203ENST00000505045 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
CDH9-203ENST00000505045 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
CDH9-203ENST00000505045 C7P10643 843 aa9.98□□□□□ -0.81
CDH9-203ENST00000505045 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
CDH9-203ENST00000505045 SLC39A7Q92504 469 aa9.98□□□□□ -0.81
CDH9-203ENST00000505045 PROM2Q8N271 834 aa9.91□□□□□ -0.82
CDH9-203ENST00000505045 ASTLQ6HA08 431 aaPredicted RBP9.91□□□□□ -0.82
CDH9-203ENST00000505045 PHF12Q96QT6 1004 aa9.9□□□□□ -0.82
CDH9-203ENST00000505045 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
CDH9-203ENST00000505045 SHROOM4Q9ULL8 1493 aa9.84□□□□□ -0.83
CDH9-203ENST00000505045 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
CDH9-203ENST00000505045 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
CDH9-203ENST00000505045 ST18O60284 1047 aa9.78□□□□□ -0.84
CDH9-203ENST00000505045 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
CDH9-203ENST00000505045 EIF4G1Q04637 1599 aaKnown RBP9.78□□□□□ -0.84
CDH9-203ENST00000505045 CREBZFQ9NS37 354 aa9.76□□□□□ -0.85
CDH9-203ENST00000505045 FKBP8Q14318 412 aa9.73□□□□□ -0.85
CDH9-203ENST00000505045 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
CDH9-203ENST00000505045 POTEFA5A3E0 1075 aa9.71□□□□□ -0.85
CDH9-203ENST00000505045 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
CDH9-203ENST00000505045 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
CDH9-203ENST00000505045 MNX1P50219 401 aaPredicted RBP9.66□□□□□ -0.86
CDH9-203ENST00000505045 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
CDH9-203ENST00000505045 TMEM121BQ9BXQ6 578 aaPredicted RBP9.57□□□□□ -0.88
CDH9-203ENST00000505045 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
CDH9-203ENST00000505045 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDH9-203ENST00000505045 SMARCA4P51532 1647 aa9.51□□□□□ -0.89
CDH9-203ENST00000505045 SEC24BO95487 1268 aa9.51□□□□□ -0.89
CDH9-203ENST00000505045 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
CDH9-203ENST00000505045 MIER1Q8N108 512 aa9.49□□□□□ -0.89
CDH9-203ENST00000505045 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
CDH9-203ENST00000505045 ATAD2BQ9ULI0 1458 aa9.46□□□□□ -0.9
CDH9-203ENST00000505045 FBXO3Q9UK99 471 aa9.45□□□□□ -0.9
CDH9-203ENST00000505045 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
CDH9-203ENST00000505045 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
CDH9-203ENST00000505045 NCAPD3P42695 1498 aa9.44□□□□□ -0.9
CDH9-203ENST00000505045 BAZ1AQ9NRL2 1556 aaPredicted RBP9.43□□□□□ -0.9
CDH9-203ENST00000505045 PLCD3Q8N3E9 789 aa9.42□□□□□ -0.9
CDH9-203ENST00000505045 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
CDH9-203ENST00000505045 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
CDH9-203ENST00000505045 SMARCA2P51531 1590 aa9.42□□□□□ -0.9
CDH9-203ENST00000505045 MROH2BQ7Z745 1585 aa9.42□□□□□ -0.9
CDH9-203ENST00000505045 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
CDH9-203ENST00000505045 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
CDH9-203ENST00000505045 NUBP1P53384 320 aa9.38□□□□□ -0.91
CDH9-203ENST00000505045 RASEFQ8IZ41 740 aa9.38□□□□□ -0.91
CDH9-203ENST00000505045 SNPHO15079 494 aa9.37□□□□□ -0.91
CDH9-203ENST00000505045 TIE1P35590 1138 aa9.37□□□□□ -0.91
CDH9-203ENST00000505045 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
CDH9-203ENST00000505045 ZBTB47Q9UFB7 747 aaPredicted RBP9.36□□□□□ -0.91
CDH9-203ENST00000505045 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
CDH9-203ENST00000505045 BAZ1BQ9UIG0 1483 aaKnown RBP9.36□□□□□ -0.91
CDH9-203ENST00000505045 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
CDH9-203ENST00000505045 NESP48681 1621 aa9.34□□□□□ -0.92
CDH9-203ENST00000505045 WIZO95785 1651 aa9.33□□□□□ -0.92
CDH9-203ENST00000505045 EMP3P54852 163 aa9.33□□□□□ -0.92
CDH9-203ENST00000505045 IER5LQ5T953 404 aa9.31□□□□□ -0.92
CDH9-203ENST00000505045 KIF12Q96FN5 646 aa9.31□□□□□ -0.92
CDH9-203ENST00000505045 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
CDH9-203ENST00000505045 POTEB3A0JP26 581 aa9.3□□□□□ -0.92
CDH9-203ENST00000505045 TTLL13PA6NNM8 815 aa9.3□□□□□ -0.92
CDH9-203ENST00000505045 POTEBQ6S5H4 581 aa9.3□□□□□ -0.92
CDH9-203ENST00000505045 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
CDH9-203ENST00000505045 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
CDH9-203ENST00000505045 KIF21AQ7Z4S6 1674 aa9.25□□□□□ -0.93
CDH9-203ENST00000505045 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
CDH9-203ENST00000505045 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
CDH9-203ENST00000505045 THOC2Q8NI27 1593 aaKnown RBP9.25□□□□□ -0.93
CDH9-203ENST00000505045 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
CDH9-203ENST00000505045 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
CDH9-203ENST00000505045 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
CDH9-203ENST00000505045 CUX2O14529 1486 aa9.22□□□□□ -0.93
CDH9-203ENST00000505045 MAP3K13O43283 966 aa9.21□□□□□ -0.93
CDH9-203ENST00000505045 FAM212AQ96EL1 285 aa9.21□□□□□ -0.93
CDH9-203ENST00000505045 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
CDH9-203ENST00000505045 SGIP1Q9BQI5 828 aa9.19□□□□□ -0.94
CDH9-203ENST00000505045 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
CDH9-203ENST00000505045 PLCG2P16885 1265 aa9.17□□□□□ -0.94
CDH9-203ENST00000505045 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
CDH9-203ENST00000505045 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.94
CDH9-203ENST00000505045 SPOCK2Q92563 424 aa9.15□□□□□ -0.95
CDH9-203ENST00000505045 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
CDH9-203ENST00000505045 MYT1LQ9UL68 1186 aa9.13□□□□□ -0.95
CDH9-203ENST00000505045 GSE1Q14687 1217 aa9.12□□□□□ -0.95
CDH9-203ENST00000505045 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
CDH9-203ENST00000505045 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
CDH9-203ENST00000505045 IFNL1Q8IU54 200 aa9.12□□□□□ -0.95
CDH9-203ENST00000505045 PYGBP11216 843 aa9.1□□□□□ -0.95
CDH9-203ENST00000505045 WDR62O43379 1518 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms