RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
COL4A5-207ENST00000504541 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
COL4A5-207ENST00000504541 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
COL4A5-207ENST00000504541 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
COL4A5-207ENST00000504541 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
COL4A5-207ENST00000504541 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
COL4A5-207ENST00000504541 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
COL4A5-207ENST00000504541 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-207ENST00000504541 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
COL4A5-207ENST00000504541 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
COL4A5-207ENST00000504541 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
COL4A5-207ENST00000504541 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
COL4A5-207ENST00000504541 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
COL4A5-207ENST00000504541 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL4A5-207ENST00000504541 MAMSTRQ6ZN01 415 aa12.67□□□□□ -0.38
COL4A5-207ENST00000504541 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
COL4A5-207ENST00000504541 PAK3O75914 559 aaPredicted RBP12.66□□□□□ -0.38
COL4A5-207ENST00000504541 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.38
COL4A5-207ENST00000504541 C7P10643 843 aa12.64□□□□□ -0.39
COL4A5-207ENST00000504541 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
COL4A5-207ENST00000504541 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
COL4A5-207ENST00000504541 ATMINO43313 823 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-207ENST00000504541 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-207ENST00000504541 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
COL4A5-207ENST00000504541 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
COL4A5-207ENST00000504541 NUBP1P53384 320 aa12.55□□□□□ -0.4
COL4A5-207ENST00000504541 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
COL4A5-207ENST00000504541 GSE1Q14687 1217 aa12.53□□□□□ -0.4
COL4A5-207ENST00000504541 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
COL4A5-207ENST00000504541 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
COL4A5-207ENST00000504541 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
COL4A5-207ENST00000504541 PKD2Q13563 968 aa12.48□□□□□ -0.41
COL4A5-207ENST00000504541 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-207ENST00000504541 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-207ENST00000504541 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
COL4A5-207ENST00000504541 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-207ENST00000504541 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
COL4A5-207ENST00000504541 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
COL4A5-207ENST00000504541 PYGBP11216 843 aa12.33□□□□□ -0.44
COL4A5-207ENST00000504541 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
COL4A5-207ENST00000504541 RGL2O15211 777 aa12.28□□□□□ -0.44
COL4A5-207ENST00000504541 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
COL4A5-207ENST00000504541 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
COL4A5-207ENST00000504541 CCDC61Q9Y6R9 512 aa12.27□□□□□ -0.45
COL4A5-207ENST00000504541 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
COL4A5-207ENST00000504541 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
COL4A5-207ENST00000504541 ST18O60284 1047 aa12.23□□□□□ -0.45
COL4A5-207ENST00000504541 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
COL4A5-207ENST00000504541 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
COL4A5-207ENST00000504541 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
COL4A5-207ENST00000504541 RIOK3O14730 519 aaKnown RBP12.2□□□□□ -0.46
COL4A5-207ENST00000504541 TIE1P35590 1138 aa12.18□□□□□ -0.46
COL4A5-207ENST00000504541 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
COL4A5-207ENST00000504541 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
COL4A5-207ENST00000504541 MAP3K13O43283 966 aa12.16□□□□□ -0.46
COL4A5-207ENST00000504541 SEC24BO95487 1268 aa12.16□□□□□ -0.46
COL4A5-207ENST00000504541 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-207ENST00000504541 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
COL4A5-207ENST00000504541 VGFO15240 615 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-207ENST00000504541 CHGAP10645 457 aaKnown RBP12.13□□□□□ -0.47
COL4A5-207ENST00000504541 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
COL4A5-207ENST00000504541 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
COL4A5-207ENST00000504541 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
COL4A5-207ENST00000504541 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
COL4A5-207ENST00000504541 STK25O00506 426 aa12.06□□□□□ -0.48
COL4A5-207ENST00000504541 PDAP1Q13442 181 aaKnown RBP12.06□□□□□ -0.48
COL4A5-207ENST00000504541 IER5LQ5T953 404 aa12.06□□□□□ -0.48
COL4A5-207ENST00000504541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-207ENST00000504541 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-207ENST00000504541 PSEN1P49768 467 aa12.04□□□□□ -0.48
COL4A5-207ENST00000504541 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
COL4A5-207ENST00000504541 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-207ENST00000504541 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
COL4A5-207ENST00000504541 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
COL4A5-207ENST00000504541 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-207ENST00000504541 BBXQ8WY36 941 aaPredicted RBP12□□□□□ -0.49
COL4A5-207ENST00000504541 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
COL4A5-207ENST00000504541 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
COL4A5-207ENST00000504541 TMEM106CQ9BVX2 250 aa11.95□□□□□ -0.5
COL4A5-207ENST00000504541 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
COL4A5-207ENST00000504541 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
COL4A5-207ENST00000504541 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
COL4A5-207ENST00000504541 CABP2Q9NPB3 220 aa11.9□□□□□ -0.5
COL4A5-207ENST00000504541 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
COL4A5-207ENST00000504541 PLCG2P16885 1265 aa11.87□□□□□ -0.51
COL4A5-207ENST00000504541 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
COL4A5-207ENST00000504541 SNPHO15079 494 aa11.86□□□□□ -0.51
COL4A5-207ENST00000504541 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
COL4A5-207ENST00000504541 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
COL4A5-207ENST00000504541 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
COL4A5-207ENST00000504541 MKRN3Q13064 507 aaKnown RBP11.83□□□□□ -0.52
COL4A5-207ENST00000504541 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
COL4A5-207ENST00000504541 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
COL4A5-207ENST00000504541 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
COL4A5-207ENST00000504541 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-207ENST00000504541 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
COL4A5-207ENST00000504541 SOX12O15370 315 aa11.79□□□□□ -0.52
COL4A5-207ENST00000504541 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
COL4A5-207ENST00000504541 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
COL4A5-207ENST00000504541 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms