RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
OTUD4-204ENST00000504331 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
OTUD4-204ENST00000504331 C7P10643 843 aa12.24□□□□□ -0.45
OTUD4-204ENST00000504331 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
OTUD4-204ENST00000504331 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
OTUD4-204ENST00000504331 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
OTUD4-204ENST00000504331 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
OTUD4-204ENST00000504331 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
OTUD4-204ENST00000504331 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
OTUD4-204ENST00000504331 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
OTUD4-204ENST00000504331 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
OTUD4-204ENST00000504331 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
OTUD4-204ENST00000504331 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
OTUD4-204ENST00000504331 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
OTUD4-204ENST00000504331 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
OTUD4-204ENST00000504331 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
OTUD4-204ENST00000504331 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
OTUD4-204ENST00000504331 COLQQ9Y215 455 aaPredicted RBP11.95□□□□□ -0.5
OTUD4-204ENST00000504331 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
OTUD4-204ENST00000504331 TIE1P35590 1138 aa11.89□□□□□ -0.51
OTUD4-204ENST00000504331 MAP3K13O43283 966 aa11.87□□□□□ -0.51
OTUD4-204ENST00000504331 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
OTUD4-204ENST00000504331 ST18O60284 1047 aa11.84□□□□□ -0.51
OTUD4-204ENST00000504331 SEC24BO95487 1268 aa11.82□□□□□ -0.52
OTUD4-204ENST00000504331 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
OTUD4-204ENST00000504331 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
OTUD4-204ENST00000504331 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
OTUD4-204ENST00000504331 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
OTUD4-204ENST00000504331 IER5LQ5T953 404 aa11.75□□□□□ -0.53
OTUD4-204ENST00000504331 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
OTUD4-204ENST00000504331 PROM2Q8N271 834 aa11.74□□□□□ -0.53
OTUD4-204ENST00000504331 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
OTUD4-204ENST00000504331 SGIP1Q9BQI5 828 aa11.62□□□□□ -0.55
OTUD4-204ENST00000504331 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
OTUD4-204ENST00000504331 ABCC9O60706 1549 aa11.6□□□□□ -0.55
OTUD4-204ENST00000504331 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
OTUD4-204ENST00000504331 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
OTUD4-204ENST00000504331 PLCG2P16885 1265 aa11.57□□□□□ -0.56
OTUD4-204ENST00000504331 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
OTUD4-204ENST00000504331 MIER1Q8N108 512 aa11.55□□□□□ -0.56
OTUD4-204ENST00000504331 TMEM106CQ9BVX2 250 aa11.55□□□□□ -0.56
OTUD4-204ENST00000504331 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
OTUD4-204ENST00000504331 NUBP1P53384 320 aa11.48□□□□□ -0.57
OTUD4-204ENST00000504331 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
OTUD4-204ENST00000504331 SNPHO15079 494 aa11.47□□□□□ -0.57
OTUD4-204ENST00000504331 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
OTUD4-204ENST00000504331 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
OTUD4-204ENST00000504331 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
OTUD4-204ENST00000504331 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
OTUD4-204ENST00000504331 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
OTUD4-204ENST00000504331 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
OTUD4-204ENST00000504331 EMP3P54852 163 aa11.39□□□□□ -0.59
OTUD4-204ENST00000504331 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
OTUD4-204ENST00000504331 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
OTUD4-204ENST00000504331 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
OTUD4-204ENST00000504331 FAM212AQ96EL1 285 aa11.34□□□□□ -0.59
OTUD4-204ENST00000504331 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
OTUD4-204ENST00000504331 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
OTUD4-204ENST00000504331 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
OTUD4-204ENST00000504331 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
OTUD4-204ENST00000504331 C3orf67Q6ZVT6 689 aa11.26□□□□□ -0.61
OTUD4-204ENST00000504331 PYGBP11216 843 aa11.25□□□□□ -0.61
OTUD4-204ENST00000504331 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
OTUD4-204ENST00000504331 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
OTUD4-204ENST00000504331 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
OTUD4-204ENST00000504331 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
OTUD4-204ENST00000504331 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
OTUD4-204ENST00000504331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.63
OTUD4-204ENST00000504331 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
OTUD4-204ENST00000504331 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
OTUD4-204ENST00000504331 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
OTUD4-204ENST00000504331 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
OTUD4-204ENST00000504331 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
OTUD4-204ENST00000504331 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
OTUD4-204ENST00000504331 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
OTUD4-204ENST00000504331 ERBB3P21860 1342 aa11.02□□□□□ -0.65
OTUD4-204ENST00000504331 PSEN1P49768 467 aa10.98□□□□□ -0.65
OTUD4-204ENST00000504331 NACADO15069 1562 aa10.98□□□□□ -0.65
OTUD4-204ENST00000504331 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
OTUD4-204ENST00000504331 VARS2Q5ST30 1063 aaKnown RBP10.96□□□□□ -0.65
OTUD4-204ENST00000504331 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
OTUD4-204ENST00000504331 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
OTUD4-204ENST00000504331 CHRM1P11229 460 aaPredicted RBP10.91□□□□□ -0.66
OTUD4-204ENST00000504331 GSE1Q14687 1217 aa10.89□□□□□ -0.67
OTUD4-204ENST00000504331 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
OTUD4-204ENST00000504331 G3V3G9 751 aa10.87□□□□□ -0.67
OTUD4-204ENST00000504331 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
OTUD4-204ENST00000504331 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
OTUD4-204ENST00000504331 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
OTUD4-204ENST00000504331 PTGER2P43116 358 aa10.82□□□□□ -0.68
OTUD4-204ENST00000504331 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
OTUD4-204ENST00000504331 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
OTUD4-204ENST00000504331 FKBP8Q14318 412 aa10.8□□□□□ -0.68
OTUD4-204ENST00000504331 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
OTUD4-204ENST00000504331 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
OTUD4-204ENST00000504331 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
OTUD4-204ENST00000504331 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
OTUD4-204ENST00000504331 SHROOM4Q9ULL8 1493 aa10.74□□□□□ -0.69
OTUD4-204ENST00000504331 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
OTUD4-204ENST00000504331 MICALL2Q8IY33 904 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms