RNA–Protein interactions for RNA: ENST00000503208.1

LINC00616-201, long intergenic non-protein coding RNA 616, humanhuman

TSL 5

Gene LINC00616, Length 498 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-201ENST00000503208 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
LINC00616-201ENST00000503208 C7P10643 843 aa9.37□□□□□ -0.91
LINC00616-201ENST00000503208 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
LINC00616-201ENST00000503208 ATMINO43313 823 aaPredicted RBP9.36□□□□□ -0.91
LINC00616-201ENST00000503208 MS4A3Q96HJ5 214 aa9.31□□□□□ -0.92
LINC00616-201ENST00000503208 SCUBE2Q9NQ36 999 aa9.3□□□□□ -0.92
LINC00616-201ENST00000503208 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
LINC00616-201ENST00000503208 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
LINC00616-201ENST00000503208 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
LINC00616-201ENST00000503208 NPM1P06748 294 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00616-201ENST00000503208 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
LINC00616-201ENST00000503208 POTEFA5A3E0 1075 aa9.22□□□□□ -0.93
LINC00616-201ENST00000503208 SPDYE4A6NLX3 237 aa9.21□□□□□ -0.94
LINC00616-201ENST00000503208 BMP2KQ9NSY1 1161 aaPredicted RBP9.12□□□□□ -0.95
LINC00616-201ENST00000503208 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
LINC00616-201ENST00000503208 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
LINC00616-201ENST00000503208 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
LINC00616-201ENST00000503208 FKBP8Q14318 412 aa9.08□□□□□ -0.96
LINC00616-201ENST00000503208 COLQQ9Y215 455 aaPredicted RBP9.08□□□□□ -0.96
LINC00616-201ENST00000503208 ST18O60284 1047 aa9.07□□□□□ -0.96
LINC00616-201ENST00000503208 SPNS2Q8IVW8 549 aa9.07□□□□□ -0.96
LINC00616-201ENST00000503208 KIF12Q96FN5 646 aa9.07□□□□□ -0.96
LINC00616-201ENST00000503208 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
LINC00616-201ENST00000503208 PROM2Q8N271 834 aa9.05□□□□□ -0.96
LINC00616-201ENST00000503208 TIE1P35590 1138 aa9.03□□□□□ -0.96
LINC00616-201ENST00000503208 SEC24BO95487 1268 aa9.02□□□□□ -0.97
LINC00616-201ENST00000503208 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
LINC00616-201ENST00000503208 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
LINC00616-201ENST00000503208 MAP3K13O43283 966 aa8.98□□□□□ -0.97
LINC00616-201ENST00000503208 IER5LQ5T953 404 aa8.94□□□□□ -0.98
LINC00616-201ENST00000503208 TRIM35Q9UPQ4 493 aa8.91□□□□□ -0.98
LINC00616-201ENST00000503208 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
LINC00616-201ENST00000503208 MARVELD3Q96A59 401 aa8.85□□□□□ -0.99
LINC00616-201ENST00000503208 RASEFQ8IZ41 740 aa8.84□□□□□ -0.99
LINC00616-201ENST00000503208 SNPHO15079 494 aa8.8□□□□□ -1
LINC00616-201ENST00000503208 SGIP1Q9BQI5 828 aa8.8□□□□□ -1
LINC00616-201ENST00000503208 PLCG2P16885 1265 aa8.79□□□□□ -1
LINC00616-201ENST00000503208 PCDHB13Q9Y5F0 798 aa8.79□□□□□ -1
LINC00616-201ENST00000503208 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
LINC00616-201ENST00000503208 FBXO3Q9UK99 471 aa8.78□□□□□ -1
LINC00616-201ENST00000503208 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
LINC00616-201ENST00000503208 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
LINC00616-201ENST00000503208 TMEM106CQ9BVX2 250 aa8.75□□□□□ -1.01
LINC00616-201ENST00000503208 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
LINC00616-201ENST00000503208 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
LINC00616-201ENST00000503208 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
LINC00616-201ENST00000503208 MIER1Q8N108 512 aa8.73□□□□□ -1.01
LINC00616-201ENST00000503208 EMP3P54852 163 aa8.72□□□□□ -1.01
LINC00616-201ENST00000503208 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
LINC00616-201ENST00000503208 PLCD3Q8N3E9 789 aa8.71□□□□□ -1.02
LINC00616-201ENST00000503208 PLEKHG5O94827 1062 aa8.7□□□□□ -1.02
LINC00616-201ENST00000503208 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
LINC00616-201ENST00000503208 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
LINC00616-201ENST00000503208 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
LINC00616-201ENST00000503208 FAM205CA6NFA0 338 aa8.65□□□□□ -1.02
LINC00616-201ENST00000503208 ZBTB47Q9UFB7 747 aaPredicted RBP8.62□□□□□ -1.03
LINC00616-201ENST00000503208 NUBP1P53384 320 aa8.61□□□□□ -1.03
LINC00616-201ENST00000503208 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
LINC00616-201ENST00000503208 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
LINC00616-201ENST00000503208 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
LINC00616-201ENST00000503208 KLHL34Q8N239 644 aa8.55□□□□□ -1.04
LINC00616-201ENST00000503208 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
LINC00616-201ENST00000503208 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
LINC00616-201ENST00000503208 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
LINC00616-201ENST00000503208 PCDHB8Q9UN66 801 aa8.48□□□□□ -1.05
LINC00616-201ENST00000503208 SPOCK2Q92563 424 aa8.47□□□□□ -1.05
LINC00616-201ENST00000503208 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
LINC00616-201ENST00000503208 PYGBP11216 843 aa8.45□□□□□ -1.06
LINC00616-201ENST00000503208 MYT1LQ9UL68 1186 aa8.45□□□□□ -1.06
LINC00616-201ENST00000503208 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
LINC00616-201ENST00000503208 HOXB1P14653 301 aaPredicted RBP8.42□□□□□ -1.06
LINC00616-201ENST00000503208 ERBB3P21860 1342 aa8.41□□□□□ -1.06
LINC00616-201ENST00000503208 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
LINC00616-201ENST00000503208 GSE1Q14687 1217 aa8.4□□□□□ -1.06
LINC00616-201ENST00000503208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00616-201ENST00000503208 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
LINC00616-201ENST00000503208 ILDR1Q86SU0 546 aaPredicted RBP8.36□□□□□ -1.07
LINC00616-201ENST00000503208 ZNF710Q8N1W2 664 aa8.36□□□□□ -1.07
LINC00616-201ENST00000503208 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
LINC00616-201ENST00000503208 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
LINC00616-201ENST00000503208 DPY19L2Q6NUT2 758 aa8.34□□□□□ -1.07
LINC00616-201ENST00000503208 DOK7Q18PE1 504 aa8.33□□□□□ -1.08
LINC00616-201ENST00000503208 PTGER2P43116 358 aa8.31□□□□□ -1.08
LINC00616-201ENST00000503208 ZNF687Q8N1G0 1237 aa8.3□□□□□ -1.08
LINC00616-201ENST00000503208 CHRM1P11229 460 aaPredicted RBP8.29□□□□□ -1.08
LINC00616-201ENST00000503208 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
LINC00616-201ENST00000503208 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
LINC00616-201ENST00000503208 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
LINC00616-201ENST00000503208 PSEN1P49768 467 aa8.26□□□□□ -1.09
LINC00616-201ENST00000503208 G3V3G9 751 aa8.25□□□□□ -1.09
LINC00616-201ENST00000503208 RIMBP2O15034 1052 aa8.24□□□□□ -1.09
LINC00616-201ENST00000503208 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
LINC00616-201ENST00000503208 ANKRD13DQ6ZTN6 518 aa8.21□□□□□ -1.1
LINC00616-201ENST00000503208 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.1
LINC00616-201ENST00000503208 PKD2Q13563 968 aa8.2□□□□□ -1.1
LINC00616-201ENST00000503208 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
LINC00616-201ENST00000503208 ECM2O94769 699 aaPredicted RBP8.18□□□□□ -1.1
LINC00616-201ENST00000503208 RNF25Q96BH1 459 aaPredicted RBP8.18□□□□□ -1.1
LINC00616-201ENST00000503208 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
LINC00616-201ENST00000503208 RIOK3O14730 519 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms