RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
CRNDE-202ENST00000502066 PHF12Q96QT6 1004 aa16.24■□□□□ 0.19
CRNDE-202ENST00000502066 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
CRNDE-202ENST00000502066 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
CRNDE-202ENST00000502066 PROM2Q8N271 834 aa16.13■□□□□ 0.17
CRNDE-202ENST00000502066 NACADO15069 1562 aa16.05■□□□□ 0.16
CRNDE-202ENST00000502066 TSPYL2Q9H2G4 693 aaPredicted RBP16.03■□□□□ 0.16
CRNDE-202ENST00000502066 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
CRNDE-202ENST00000502066 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
CRNDE-202ENST00000502066 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
CRNDE-202ENST00000502066 MS4A3Q96HJ5 214 aa15.98■□□□□ 0.15
CRNDE-202ENST00000502066 POTEB2H3BUK9 544 aa15.95■□□□□ 0.14
CRNDE-202ENST00000502066 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CRNDE-202ENST00000502066 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
CRNDE-202ENST00000502066 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
CRNDE-202ENST00000502066 ATMINO43313 823 aaPredicted RBP15.83■□□□□ 0.12
CRNDE-202ENST00000502066 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
CRNDE-202ENST00000502066 ASTLQ6HA08 431 aaPredicted RBP15.82■□□□□ 0.12
CRNDE-202ENST00000502066 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
CRNDE-202ENST00000502066 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
CRNDE-202ENST00000502066 KIF12Q96FN5 646 aa15.8■□□□□ 0.12
CRNDE-202ENST00000502066 METRNQ9UJH8 293 aa15.79■□□□□ 0.12
CRNDE-202ENST00000502066 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
CRNDE-202ENST00000502066 TRPC6Q9Y210 931 aa15.76■□□□□ 0.11
CRNDE-202ENST00000502066 MAP3K13O43283 966 aa15.73■□□□□ 0.11
CRNDE-202ENST00000502066 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
CRNDE-202ENST00000502066 FKBP8Q14318 412 aa15.72■□□□□ 0.11
CRNDE-202ENST00000502066 SLC39A7Q92504 469 aa15.71■□□□□ 0.11
CRNDE-202ENST00000502066 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
CRNDE-202ENST00000502066 C7P10643 843 aa15.7■□□□□ 0.1
CRNDE-202ENST00000502066 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
CRNDE-202ENST00000502066 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
CRNDE-202ENST00000502066 NUBP1P53384 320 aa15.59■□□□□ 0.09
CRNDE-202ENST00000502066 POTEFA5A3E0 1075 aa15.56■□□□□ 0.08
CRNDE-202ENST00000502066 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
CRNDE-202ENST00000502066 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
CRNDE-202ENST00000502066 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
CRNDE-202ENST00000502066 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
CRNDE-202ENST00000502066 TIE1P35590 1138 aa15.54■□□□□ 0.08
CRNDE-202ENST00000502066 PCDHB13Q9Y5F0 798 aa15.54■□□□□ 0.08
CRNDE-202ENST00000502066 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
CRNDE-202ENST00000502066 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
CRNDE-202ENST00000502066 POTEMA6NI47 508 aa15.49■□□□□ 0.07
CRNDE-202ENST00000502066 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
CRNDE-202ENST00000502066 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
CRNDE-202ENST00000502066 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
CRNDE-202ENST00000502066 POTEGQ6S5H5 508 aa15.45■□□□□ 0.06
CRNDE-202ENST00000502066 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CRNDE-202ENST00000502066 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
CRNDE-202ENST00000502066 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
CRNDE-202ENST00000502066 SEC24BO95487 1268 aa15.43■□□□□ 0.06
CRNDE-202ENST00000502066 SCUBE2Q9NQ36 999 aa15.43■□□□□ 0.06
CRNDE-202ENST00000502066 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
CRNDE-202ENST00000502066 SGIP1Q9BQI5 828 aa15.41■□□□□ 0.06
CRNDE-202ENST00000502066 DCAF8Q5TAQ9 597 aa15.39■□□□□ 0.05
CRNDE-202ENST00000502066 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
CRNDE-202ENST00000502066 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
CRNDE-202ENST00000502066 SOCS7O14512 581 aa15.37■□□□□ 0.05
CRNDE-202ENST00000502066 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
CRNDE-202ENST00000502066 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
CRNDE-202ENST00000502066 PYGBP11216 843 aa15.36■□□□□ 0.05
CRNDE-202ENST00000502066 LCE2DQ5TA82 110 aaPredicted RBP15.33■□□□□ 0.04
CRNDE-202ENST00000502066 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
CRNDE-202ENST00000502066 NESP48681 1621 aa15.31■□□□□ 0.04
CRNDE-202ENST00000502066 IER5LQ5T953 404 aa15.29■□□□□ 0.04
CRNDE-202ENST00000502066 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
CRNDE-202ENST00000502066 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
CRNDE-202ENST00000502066 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
CRNDE-202ENST00000502066 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
CRNDE-202ENST00000502066 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
CRNDE-202ENST00000502066 ILDR2Q71H61 639 aa15.21■□□□□ 0.03
CRNDE-202ENST00000502066 PLCG2P16885 1265 aa15.19■□□□□ 0.02
CRNDE-202ENST00000502066 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
CRNDE-202ENST00000502066 IRX5P78411 483 aaPredicted RBP15.16■□□□□ 0.02
CRNDE-202ENST00000502066 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
CRNDE-202ENST00000502066 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
CRNDE-202ENST00000502066 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
CRNDE-202ENST00000502066 OCEL1Q9H607 264 aa15.09■□□□□ 0.01
CRNDE-202ENST00000502066 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
CRNDE-202ENST00000502066 GSE1Q14687 1217 aa15.07■□□□□ 0
CRNDE-202ENST00000502066 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
CRNDE-202ENST00000502066 ST18O60284 1047 aa15.01□□□□□ -0.01
CRNDE-202ENST00000502066 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
CRNDE-202ENST00000502066 KDM4FA0A1W2PPD8 638 aa14.99□□□□□ -0.01
CRNDE-202ENST00000502066 ZNF467Q7Z7K2 595 aaPredicted RBP14.99□□□□□ -0.01
CRNDE-202ENST00000502066 IFNLR1Q8IU57 520 aaPredicted RBP14.97□□□□□ -0.01
CRNDE-202ENST00000502066 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
CRNDE-202ENST00000502066 PSEN1P49768 467 aa14.95□□□□□ -0.02
CRNDE-202ENST00000502066 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
CRNDE-202ENST00000502066 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
CRNDE-202ENST00000502066 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
CRNDE-202ENST00000502066 PDCD7Q8N8D1 485 aaKnown RBP14.94□□□□□ -0.02
CRNDE-202ENST00000502066 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
CRNDE-202ENST00000502066 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
CRNDE-202ENST00000502066 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
CRNDE-202ENST00000502066 DISP3Q9P2K9 1392 aa14.92□□□□□ -0.02
CRNDE-202ENST00000502066 SPOCK2Q92563 424 aa14.91□□□□□ -0.02
CRNDE-202ENST00000502066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.88□□□□□ -0.03
CRNDE-202ENST00000502066 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
CRNDE-202ENST00000502066 PDAP1Q13442 181 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms