RNA–Protein interactions for RNA: ENST00000498700.5

CRBN-213, Transcript of cereblon, humanhuman

TSL 2

Gene CRBN, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRBN-213ENST00000498700 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
CRBN-213ENST00000498700 MAMSTRQ6ZN01 415 aa12.02□□□□□ -0.49
CRBN-213ENST00000498700 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
CRBN-213ENST00000498700 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
CRBN-213ENST00000498700 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
CRBN-213ENST00000498700 FKBP8Q14318 412 aa11.97□□□□□ -0.49
CRBN-213ENST00000498700 POTEMA6NI47 508 aa11.96□□□□□ -0.49
CRBN-213ENST00000498700 PROM2Q8N271 834 aa11.96□□□□□ -0.49
CRBN-213ENST00000498700 MIER1Q8N108 512 aa11.93□□□□□ -0.5
CRBN-213ENST00000498700 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
CRBN-213ENST00000498700 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
CRBN-213ENST00000498700 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
CRBN-213ENST00000498700 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
CRBN-213ENST00000498700 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
CRBN-213ENST00000498700 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
CRBN-213ENST00000498700 TIE1P35590 1138 aa11.84□□□□□ -0.51
CRBN-213ENST00000498700 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CRBN-213ENST00000498700 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
CRBN-213ENST00000498700 MAP3K13O43283 966 aa11.81□□□□□ -0.52
CRBN-213ENST00000498700 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
CRBN-213ENST00000498700 SEC24BO95487 1268 aa11.8□□□□□ -0.52
CRBN-213ENST00000498700 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
CRBN-213ENST00000498700 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
CRBN-213ENST00000498700 FAM163AQ96GL9 167 aaPredicted RBP11.77□□□□□ -0.53
CRBN-213ENST00000498700 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
CRBN-213ENST00000498700 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
CRBN-213ENST00000498700 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
CRBN-213ENST00000498700 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
CRBN-213ENST00000498700 IER5LQ5T953 404 aa11.7□□□□□ -0.54
CRBN-213ENST00000498700 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
CRBN-213ENST00000498700 TRIM35Q9UPQ4 493 aa11.67□□□□□ -0.54
CRBN-213ENST00000498700 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
CRBN-213ENST00000498700 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
CRBN-213ENST00000498700 NUBP1P53384 320 aa11.6□□□□□ -0.55
CRBN-213ENST00000498700 PLCG2P16885 1265 aa11.59□□□□□ -0.55
CRBN-213ENST00000498700 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
CRBN-213ENST00000498700 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
CRBN-213ENST00000498700 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
CRBN-213ENST00000498700 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
CRBN-213ENST00000498700 SLAIN1Q8ND83 568 aa11.56□□□□□ -0.56
CRBN-213ENST00000498700 DCAF8Q5TAQ9 597 aa11.52□□□□□ -0.57
CRBN-213ENST00000498700 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
CRBN-213ENST00000498700 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
CRBN-213ENST00000498700 SNPHO15079 494 aa11.45□□□□□ -0.58
CRBN-213ENST00000498700 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
CRBN-213ENST00000498700 PYGBP11216 843 aa11.43□□□□□ -0.58
CRBN-213ENST00000498700 ST18O60284 1047 aa11.42□□□□□ -0.58
CRBN-213ENST00000498700 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
CRBN-213ENST00000498700 TMEM121BQ9BXQ6 578 aaPredicted RBP11.4□□□□□ -0.58
CRBN-213ENST00000498700 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
CRBN-213ENST00000498700 GSE1Q14687 1217 aa11.37□□□□□ -0.59
CRBN-213ENST00000498700 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
CRBN-213ENST00000498700 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
CRBN-213ENST00000498700 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
CRBN-213ENST00000498700 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
CRBN-213ENST00000498700 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
CRBN-213ENST00000498700 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
CRBN-213ENST00000498700 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
CRBN-213ENST00000498700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■□□□□ 8.8
CRBN-213ENST00000498700 G3V3G9 751 aa11.21□□□□□ -0.61
CRBN-213ENST00000498700 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
CRBN-213ENST00000498700 PDCD7Q8N8D1 485 aaKnown RBP11.2□□□□□ -0.62
CRBN-213ENST00000498700 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
CRBN-213ENST00000498700 PSEN1P49768 467 aa11.19□□□□□ -0.62
CRBN-213ENST00000498700 EMP3P54852 163 aa11.19□□□□□ -0.62
CRBN-213ENST00000498700 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
CRBN-213ENST00000498700 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CRBN-213ENST00000498700 IFNLR1Q8IU57 520 aaPredicted RBP11.17□□□□□ -0.62
CRBN-213ENST00000498700 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
CRBN-213ENST00000498700 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
CRBN-213ENST00000498700 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
CRBN-213ENST00000498700 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
CRBN-213ENST00000498700 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
CRBN-213ENST00000498700 HS3ST6Q96QI5 342 aa11.07□□□□□ -0.64
CRBN-213ENST00000498700 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
CRBN-213ENST00000498700 BOLA1Q9Y3E2 137 aa11.05□□□□□ -0.64
CRBN-213ENST00000498700 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
CRBN-213ENST00000498700 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
CRBN-213ENST00000498700 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
CRBN-213ENST00000498700 RIMBP2O15034 1052 aa11□□□□□ -0.65
CRBN-213ENST00000498700 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
CRBN-213ENST00000498700 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
CRBN-213ENST00000498700 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
CRBN-213ENST00000498700 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
CRBN-213ENST00000498700 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
CRBN-213ENST00000498700 ERBB3P21860 1342 aa10.93□□□□□ -0.66
CRBN-213ENST00000498700 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
CRBN-213ENST00000498700 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
CRBN-213ENST00000498700 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
CRBN-213ENST00000498700 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
CRBN-213ENST00000498700 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
CRBN-213ENST00000498700 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
CRBN-213ENST00000498700 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
CRBN-213ENST00000498700 PKD2Q13563 968 aa10.83□□□□□ -0.68
CRBN-213ENST00000498700 SOX12O15370 315 aa10.82□□□□□ -0.68
CRBN-213ENST00000498700 ECM2O94769 699 aaPredicted RBP10.81□□□□□ -0.68
CRBN-213ENST00000498700 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
CRBN-213ENST00000498700 RNF166Q96A37 237 aaPredicted RBP10.81□□□□□ -0.68
CRBN-213ENST00000498700 MICALL2Q8IY33 904 aa10.8□□□□□ -0.68
CRBN-213ENST00000498700 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms