RNA–Protein interactions for RNA: ENST00000498648.5

STRADB-210, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-210ENST00000498648 PODXL2Q9NZ53 605 aa8.94□□□□□ -0.98
STRADB-210ENST00000498648 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
STRADB-210ENST00000498648 LMOD2Q6P5Q4 547 aa8.92□□□□□ -0.98
STRADB-210ENST00000498648 SSUH2Q9Y2M2 353 aa8.92□□□□□ -0.98
STRADB-210ENST00000498648 POTEDQ86YR6 584 aa8.91□□□□□ -0.98
STRADB-210ENST00000498648 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
STRADB-210ENST00000498648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.9□□□□□ -0.98
STRADB-210ENST00000498648 RIOK3O14730 519 aaKnown RBP8.89□□□□□ -0.99
STRADB-210ENST00000498648 CAPN15O75808 1086 aa8.88□□□□□ -0.99
STRADB-210ENST00000498648 GSE1Q14687 1217 aa8.88□□□□□ -0.99
STRADB-210ENST00000498648 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
STRADB-210ENST00000498648 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
STRADB-210ENST00000498648 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
STRADB-210ENST00000498648 PABPN1Q86U42 306 aaKnown RBP eCLIP8.87□□□□□ -0.99
STRADB-210ENST00000498648 STK25O00506 426 aa8.85□□□□□ -0.99
STRADB-210ENST00000498648 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
STRADB-210ENST00000498648 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
STRADB-210ENST00000498648 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
STRADB-210ENST00000498648 ABCB7O75027 752 aa8.81□□□□□ -1
STRADB-210ENST00000498648 NEUROD2Q15784 382 aa8.81□□□□□ -1
STRADB-210ENST00000498648 OSCARQ8IYS5 282 aa8.79□□□□□ -1
STRADB-210ENST00000498648 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
STRADB-210ENST00000498648 NUBP1P53384 320 aa8.78□□□□□ -1
STRADB-210ENST00000498648 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
STRADB-210ENST00000498648 ZC3H15Q8WU90 426 aaKnown RBP8.77□□□□□ -1.01
STRADB-210ENST00000498648 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
STRADB-210ENST00000498648 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
STRADB-210ENST00000498648 BCL11BQ9C0K0 894 aaPredicted RBP8.73□□□□□ -1.01
STRADB-210ENST00000498648 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
STRADB-210ENST00000498648 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
STRADB-210ENST00000498648 DCAF8Q5TAQ9 597 aa8.72□□□□□ -1.01
STRADB-210ENST00000498648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.71□□□□□ -1.02
STRADB-210ENST00000498648 CADPS2Q86UW7 1296 aa8.71□□□□□ -1.02
STRADB-210ENST00000498648 ZFP91Q96JP5 570 aaPredicted RBP8.71□□□□□ -1.02
STRADB-210ENST00000498648 CHRM1P11229 460 aaPredicted RBP8.69□□□□□ -1.02
STRADB-210ENST00000498648 RNF39Q9H2S5 420 aa8.68□□□□□ -1.02
STRADB-210ENST00000498648 ZMYND15Q9H091 742 aa8.66□□□□□ -1.02
STRADB-210ENST00000498648 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
STRADB-210ENST00000498648 FAM212AQ96EL1 285 aa8.65□□□□□ -1.02
STRADB-210ENST00000498648 HRCP23327 699 aa8.64□□□□□ -1.03
STRADB-210ENST00000498648 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
STRADB-210ENST00000498648 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
STRADB-210ENST00000498648 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
STRADB-210ENST00000498648 ZMYND10O75800 440 aa8.62□□□□□ -1.03
STRADB-210ENST00000498648 C1QBPQ07021 282 aaKnown RBP8.61□□□□□ -1.03
STRADB-210ENST00000498648 SEMA3EO15041 775 aa8.58□□□□□ -1.04
STRADB-210ENST00000498648 DSG3P32926 999 aa8.56□□□□□ -1.04
STRADB-210ENST00000498648 E2F4Q16254 413 aa8.55□□□□□ -1.04
STRADB-210ENST00000498648 BARGINQ6ZT62 677 aa8.54□□□□□ -1.04
STRADB-210ENST00000498648 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
STRADB-210ENST00000498648 MNX1P50219 401 aaPredicted RBP8.52□□□□□ -1.05
STRADB-210ENST00000498648 C1orf115Q9H7X2 142 aa8.52□□□□□ -1.05
STRADB-210ENST00000498648 PYGBP11216 843 aa8.51□□□□□ -1.05
STRADB-210ENST00000498648 ARID3AQ99856 593 aa8.51□□□□□ -1.05
STRADB-210ENST00000498648 GPBP1L1Q9HC44 474 aaPredicted RBP8.51□□□□□ -1.05
STRADB-210ENST00000498648 SMYD5Q6GMV2 418 aa8.5□□□□□ -1.05
STRADB-210ENST00000498648 AK7Q96M32 723 aa8.5□□□□□ -1.05
STRADB-210ENST00000498648 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
STRADB-210ENST00000498648 CREBZFQ9NS37 354 aa8.48□□□□□ -1.05
STRADB-210ENST00000498648 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
STRADB-210ENST00000498648 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.06
STRADB-210ENST00000498648 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
STRADB-210ENST00000498648 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
STRADB-210ENST00000498648 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
STRADB-210ENST00000498648 PDAP1Q13442 181 aaKnown RBP8.41□□□□□ -1.06
STRADB-210ENST00000498648 ARIH1Q9Y4X5 557 aaPredicted RBP8.41□□□□□ -1.06
STRADB-210ENST00000498648 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
STRADB-210ENST00000498648 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
STRADB-210ENST00000498648 PPP1R37O75864 691 aa8.4□□□□□ -1.06
STRADB-210ENST00000498648 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
STRADB-210ENST00000498648 APBB1O00213 710 aa8.39□□□□□ -1.07
STRADB-210ENST00000498648 PDE4DQ08499 809 aa8.39□□□□□ -1.07
STRADB-210ENST00000498648 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
STRADB-210ENST00000498648 TRIM66O15016 1216 aa8.38□□□□□ -1.07
STRADB-210ENST00000498648 GPIHBP1Q8IV16 184 aa8.38□□□□□ -1.07
STRADB-210ENST00000498648 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
STRADB-210ENST00000498648 NCKAP5LQ9HCH0 1330 aa8.36□□□□□ -1.07
STRADB-210ENST00000498648 RBM26Q5T8P6 1007 aaKnown RBP8.36□□□□□ -1.07
STRADB-210ENST00000498648 FLIIQ13045 1269 aa8.35□□□□□ -1.07
STRADB-210ENST00000498648 MFSD10Q14728 455 aa8.35□□□□□ -1.07
STRADB-210ENST00000498648 NECTIN2Q92692 538 aa8.35□□□□□ -1.07
STRADB-210ENST00000498648 PRR29P0C7W0 189 aa8.34□□□□□ -1.07
STRADB-210ENST00000498648 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
STRADB-210ENST00000498648 ZNF316A6NFI3 1004 aaPredicted RBP8.32□□□□□ -1.08
STRADB-210ENST00000498648 FAM117AQ9C073 453 aa8.32□□□□□ -1.08
STRADB-210ENST00000498648 PSEN1P49768 467 aa8.31□□□□□ -1.08
STRADB-210ENST00000498648 NLRP6P59044 892 aa8.31□□□□□ -1.08
STRADB-210ENST00000498648 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
STRADB-210ENST00000498648 PDE4AP27815 886 aa8.3□□□□□ -1.08
STRADB-210ENST00000498648 MLLT3P42568 568 aaPredicted RBP8.3□□□□□ -1.08
STRADB-210ENST00000498648 CAMK2BQ13554 666 aa8.3□□□□□ -1.08
STRADB-210ENST00000498648 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
STRADB-210ENST00000498648 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
STRADB-210ENST00000498648 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
STRADB-210ENST00000498648 PLEKHG3A1L390 1219 aa8.28□□□□□ -1.08
STRADB-210ENST00000498648 ONECUT3O60422 494 aaPredicted RBP8.28□□□□□ -1.08
STRADB-210ENST00000498648 CCDC82Q8N4S0 544 aa8.28□□□□□ -1.08
STRADB-210ENST00000498648 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
STRADB-210ENST00000498648 A6NJR5 290 aa8.27□□□□□ -1.09
STRADB-210ENST00000498648 SOX12O15370 315 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms