RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 PROM2Q8N271 834 aa11.09□□□□□ -0.63
NF1-217ENST00000498569 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
NF1-217ENST00000498569 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
NF1-217ENST00000498569 ASTLQ6HA08 431 aaPredicted RBP11.05□□□□□ -0.64
NF1-217ENST00000498569 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
NF1-217ENST00000498569 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
NF1-217ENST00000498569 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
NF1-217ENST00000498569 POTEB2H3BUK9 544 aa11.02□□□□□ -0.65
NF1-217ENST00000498569 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
NF1-217ENST00000498569 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
NF1-217ENST00000498569 C7P10643 843 aa11.01□□□□□ -0.65
NF1-217ENST00000498569 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
NF1-217ENST00000498569 ATMINO43313 823 aaPredicted RBP11□□□□□ -0.65
NF1-217ENST00000498569 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
NF1-217ENST00000498569 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
NF1-217ENST00000498569 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
NF1-217ENST00000498569 CC2D2AQ9P2K1 1620 aa10.97□□□□□ -0.65
NF1-217ENST00000498569 SHROOM4Q9ULL8 1493 aa10.95□□□□□ -0.66
NF1-217ENST00000498569 CECR2Q9BXF3 1484 aa10.93□□□□□ -0.66
NF1-217ENST00000498569 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
NF1-217ENST00000498569 POTEMA6NI47 508 aa10.91□□□□□ -0.66
NF1-217ENST00000498569 MIER1Q8N108 512 aa10.91□□□□□ -0.66
NF1-217ENST00000498569 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
NF1-217ENST00000498569 EIF4G1Q04637 1599 aaKnown RBP10.88□□□□□ -0.67
NF1-217ENST00000498569 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
NF1-217ENST00000498569 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
NF1-217ENST00000498569 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
NF1-217ENST00000498569 TIE1P35590 1138 aa10.86□□□□□ -0.67
NF1-217ENST00000498569 BMP2KQ9NSY1 1161 aaPredicted RBP10.86□□□□□ -0.67
NF1-217ENST00000498569 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
NF1-217ENST00000498569 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
NF1-217ENST00000498569 MAP3K13O43283 966 aa10.83□□□□□ -0.68
NF1-217ENST00000498569 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
NF1-217ENST00000498569 ZCCHC6Q5VYS8 1495 aaKnown RBP10.82□□□□□ -0.68
NF1-217ENST00000498569 POTEJP0CG39 1038 aa10.82□□□□□ -0.68
NF1-217ENST00000498569 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
NF1-217ENST00000498569 DCAF1Q9Y4B6 1507 aa10.82□□□□□ -0.68
NF1-217ENST00000498569 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
NF1-217ENST00000498569 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
NF1-217ENST00000498569 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
NF1-217ENST00000498569 SEC24BO95487 1268 aa10.75□□□□□ -0.69
NF1-217ENST00000498569 IER5LQ5T953 404 aa10.74□□□□□ -0.69
NF1-217ENST00000498569 PCDHB13Q9Y5F0 798 aa10.74□□□□□ -0.69
NF1-217ENST00000498569 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
NF1-217ENST00000498569 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
NF1-217ENST00000498569 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
NF1-217ENST00000498569 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
NF1-217ENST00000498569 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
NF1-217ENST00000498569 NUBP1P53384 320 aa10.69□□□□□ -0.7
NF1-217ENST00000498569 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
NF1-217ENST00000498569 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
NF1-217ENST00000498569 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
NF1-217ENST00000498569 TMEM106CQ9BVX2 250 aa10.62□□□□□ -0.71
NF1-217ENST00000498569 FKBP8Q14318 412 aa10.61□□□□□ -0.71
NF1-217ENST00000498569 PLCG2P16885 1265 aa10.6□□□□□ -0.71
NF1-217ENST00000498569 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
NF1-217ENST00000498569 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
NF1-217ENST00000498569 CUX2O14529 1486 aa10.55□□□□□ -0.72
NF1-217ENST00000498569 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
NF1-217ENST00000498569 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
NF1-217ENST00000498569 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
NF1-217ENST00000498569 PYGBP11216 843 aa10.49□□□□□ -0.73
NF1-217ENST00000498569 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
NF1-217ENST00000498569 OCEL1Q9H607 264 aa10.49□□□□□ -0.73
NF1-217ENST00000498569 ST18O60284 1047 aa10.46□□□□□ -0.73
NF1-217ENST00000498569 SNPHO15079 494 aa10.44□□□□□ -0.74
NF1-217ENST00000498569 GSE1Q14687 1217 aa10.43□□□□□ -0.74
NF1-217ENST00000498569 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
NF1-217ENST00000498569 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
NF1-217ENST00000498569 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
NF1-217ENST00000498569 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
NF1-217ENST00000498569 GOLGA2Q08379 1002 aa10.39□□□□□ -0.75
NF1-217ENST00000498569 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
NF1-217ENST00000498569 NCAPD3P42695 1498 aa10.37□□□□□ -0.75
NF1-217ENST00000498569 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
NF1-217ENST00000498569 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
NF1-217ENST00000498569 C3orf67Q6ZVT6 689 aa10.36□□□□□ -0.75
NF1-217ENST00000498569 HMGXB3Q12766 1538 aa10.36□□□□□ -0.75
NF1-217ENST00000498569 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
NF1-217ENST00000498569 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
NF1-217ENST00000498569 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
NF1-217ENST00000498569 THOC2Q8NI27 1593 aaKnown RBP10.34□□□□□ -0.75
NF1-217ENST00000498569 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
NF1-217ENST00000498569 NESP48681 1621 aa10.33□□□□□ -0.76
NF1-217ENST00000498569 ATAD2BQ9ULI0 1458 aa10.32□□□□□ -0.76
NF1-217ENST00000498569 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
NF1-217ENST00000498569 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
NF1-217ENST00000498569 PSEN1P49768 467 aa10.28□□□□□ -0.76
NF1-217ENST00000498569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
NF1-217ENST00000498569 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.76
NF1-217ENST00000498569 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
NF1-217ENST00000498569 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
NF1-217ENST00000498569 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
NF1-217ENST00000498569 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
NF1-217ENST00000498569 EMP3P54852 163 aa10.23□□□□□ -0.77
NF1-217ENST00000498569 MMRN1Q13201 1228 aa10.22□□□□□ -0.77
NF1-217ENST00000498569 SPNS2Q8IVW8 549 aa10.22□□□□□ -0.77
NF1-217ENST00000498569 G3V3G9 751 aa10.21□□□□□ -0.77
NF1-217ENST00000498569 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
NF1-217ENST00000498569 PEG3Q9GZU2 1588 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms