RNA–Protein interactions for RNA: ENST00000497935.5

NELFCD-212, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-212ENST00000497935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.564e-11■■□□□ 11.9
NELFCD-212ENST00000497935 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.57
NELFCD-212ENST00000497935 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
NELFCD-212ENST00000497935 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
NELFCD-212ENST00000497935 HRCP23327 699 aa11.42□□□□□ -0.58
NELFCD-212ENST00000497935 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
NELFCD-212ENST00000497935 APLP2Q06481 763 aa11.37□□□□□ -0.59
NELFCD-212ENST00000497935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
NELFCD-212ENST00000497935 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
NELFCD-212ENST00000497935 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
NELFCD-212ENST00000497935 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
NELFCD-212ENST00000497935 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
NELFCD-212ENST00000497935 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
NELFCD-212ENST00000497935 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
NELFCD-212ENST00000497935 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
NELFCD-212ENST00000497935 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
NELFCD-212ENST00000497935 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.6
NELFCD-212ENST00000497935 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
NELFCD-212ENST00000497935 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
NELFCD-212ENST00000497935 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
NELFCD-212ENST00000497935 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
NELFCD-212ENST00000497935 RSPH6AQ9H0K4 717 aa11.25□□□□□ -0.61
NELFCD-212ENST00000497935 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
NELFCD-212ENST00000497935 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
NELFCD-212ENST00000497935 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
NELFCD-212ENST00000497935 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
NELFCD-212ENST00000497935 MIER1Q8N108 512 aa11.21□□□□□ -0.61
NELFCD-212ENST00000497935 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
NELFCD-212ENST00000497935 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
NELFCD-212ENST00000497935 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
NELFCD-212ENST00000497935 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
NELFCD-212ENST00000497935 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
NELFCD-212ENST00000497935 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
NELFCD-212ENST00000497935 KCNV2Q8TDN2 545 aa11.15□□□□□ -0.62
NELFCD-212ENST00000497935 SLC24A3Q9HC58 644 aa11.15□□□□□ -0.62
NELFCD-212ENST00000497935 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
NELFCD-212ENST00000497935 NESP48681 1621 aa11.13□□□□□ -0.63
NELFCD-212ENST00000497935 ARID3AQ99856 593 aa11.12□□□□□ -0.63
NELFCD-212ENST00000497935 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
NELFCD-212ENST00000497935 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
NELFCD-212ENST00000497935 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
NELFCD-212ENST00000497935 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
NELFCD-212ENST00000497935 POLA2Q14181 598 aa11.07□□□□□ -0.64
NELFCD-212ENST00000497935 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
NELFCD-212ENST00000497935 WIZO95785 1651 aa11.07□□□□□ -0.64
NELFCD-212ENST00000497935 STK25O00506 426 aa11.06□□□□□ -0.64
NELFCD-212ENST00000497935 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
NELFCD-212ENST00000497935 C1orf115Q9H7X2 142 aa11.05□□□□□ -0.64
NELFCD-212ENST00000497935 CUX2O14529 1486 aa11.05□□□□□ -0.64
NELFCD-212ENST00000497935 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
NELFCD-212ENST00000497935 GSE1Q14687 1217 aa11.03□□□□□ -0.64
NELFCD-212ENST00000497935 LAMC3Q9Y6N6 1575 aa11□□□□□ -0.65
NELFCD-212ENST00000497935 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
NELFCD-212ENST00000497935 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
NELFCD-212ENST00000497935 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
NELFCD-212ENST00000497935 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
NELFCD-212ENST00000497935 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
NELFCD-212ENST00000497935 ZMYND10O75800 440 aa10.96□□□□□ -0.65
NELFCD-212ENST00000497935 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
NELFCD-212ENST00000497935 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
NELFCD-212ENST00000497935 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
NELFCD-212ENST00000497935 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
NELFCD-212ENST00000497935 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
NELFCD-212ENST00000497935 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
NELFCD-212ENST00000497935 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
NELFCD-212ENST00000497935 TESPA1A2RU30 521 aaPredicted RBP10.91□□□□□ -0.66
NELFCD-212ENST00000497935 APBB1O00213 710 aa10.91□□□□□ -0.66
NELFCD-212ENST00000497935 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
NELFCD-212ENST00000497935 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
NELFCD-212ENST00000497935 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
NELFCD-212ENST00000497935 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
NELFCD-212ENST00000497935 IL27Q8NEV9 243 aa10.89□□□□□ -0.67
NELFCD-212ENST00000497935 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
NELFCD-212ENST00000497935 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
NELFCD-212ENST00000497935 GPBP1L1Q9HC44 474 aaPredicted RBP10.87□□□□□ -0.67
NELFCD-212ENST00000497935 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
NELFCD-212ENST00000497935 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
NELFCD-212ENST00000497935 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
NELFCD-212ENST00000497935 LOC105371045A0A1W2PR82 267 aa10.86□□□□□ -0.67
NELFCD-212ENST00000497935 BARGINQ6ZT62 677 aa10.86□□□□□ -0.67
NELFCD-212ENST00000497935 SEMA3EO15041 775 aa10.85□□□□□ -0.67
NELFCD-212ENST00000497935 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
NELFCD-212ENST00000497935 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
NELFCD-212ENST00000497935 ZFP91Q96JP5 570 aaPredicted RBP10.83□□□□□ -0.68
NELFCD-212ENST00000497935 AK7Q96M32 723 aa10.83□□□□□ -0.68
NELFCD-212ENST00000497935 CFTRP13569 1480 aa10.82□□□□□ -0.68
NELFCD-212ENST00000497935 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
NELFCD-212ENST00000497935 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
NELFCD-212ENST00000497935 NUBP1P53384 320 aa10.81□□□□□ -0.68
NELFCD-212ENST00000497935 KDM4CQ9H3R0 1056 aa10.81□□□□□ -0.68
NELFCD-212ENST00000497935 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
NELFCD-212ENST00000497935 SPDYE2BA6NHP3 402 aa10.8□□□□□ -0.68
NELFCD-212ENST00000497935 SPDYE6P0CI01 402 aa10.8□□□□□ -0.68
NELFCD-212ENST00000497935 SPDYE2Q495Y8 402 aa10.8□□□□□ -0.68
NELFCD-212ENST00000497935 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
NELFCD-212ENST00000497935 MYT1Q01538 1121 aa10.79□□□□□ -0.68
NELFCD-212ENST00000497935 WDR62O43379 1518 aa10.79□□□□□ -0.68
NELFCD-212ENST00000497935 SMYD5Q6GMV2 418 aa10.78□□□□□ -0.68
NELFCD-212ENST00000497935 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
NELFCD-212ENST00000497935 CHRM1P11229 460 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms