RNA–Protein interactions for RNA: ENST00000496477.1

ITGAV-207, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 437 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-207ENST00000496477 LHX8Q68G74 356 aa14.44□□□□□ -0.1
ITGAV-207ENST00000496477 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
ITGAV-207ENST00000496477 FKBP8Q14318 412 aa14.4□□□□□ -0.1
ITGAV-207ENST00000496477 MIER1Q8N108 512 aa14.4□□□□□ -0.1
ITGAV-207ENST00000496477 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
ITGAV-207ENST00000496477 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
ITGAV-207ENST00000496477 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
ITGAV-207ENST00000496477 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
ITGAV-207ENST00000496477 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
ITGAV-207ENST00000496477 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
ITGAV-207ENST00000496477 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
ITGAV-207ENST00000496477 MS4A3Q96HJ5 214 aa14.26□□□□□ -0.13
ITGAV-207ENST00000496477 CCDC61Q9Y6R9 512 aa14.25□□□□□ -0.13
ITGAV-207ENST00000496477 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
ITGAV-207ENST00000496477 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
ITGAV-207ENST00000496477 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
ITGAV-207ENST00000496477 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
ITGAV-207ENST00000496477 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
ITGAV-207ENST00000496477 KIF12Q96FN5 646 aa14.16□□□□□ -0.14
ITGAV-207ENST00000496477 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
ITGAV-207ENST00000496477 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
ITGAV-207ENST00000496477 ASTLQ6HA08 431 aaPredicted RBP14.13□□□□□ -0.15
ITGAV-207ENST00000496477 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
ITGAV-207ENST00000496477 MAP3K13O43283 966 aa14.09□□□□□ -0.15
ITGAV-207ENST00000496477 NUBP1P53384 320 aa14.08□□□□□ -0.16
ITGAV-207ENST00000496477 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
ITGAV-207ENST00000496477 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
ITGAV-207ENST00000496477 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
ITGAV-207ENST00000496477 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
ITGAV-207ENST00000496477 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.17
ITGAV-207ENST00000496477 TRPC6Q9Y210 931 aa14.02□□□□□ -0.17
ITGAV-207ENST00000496477 C7P10643 843 aa14.01□□□□□ -0.17
ITGAV-207ENST00000496477 FAM212AQ96EL1 285 aa14□□□□□ -0.17
ITGAV-207ENST00000496477 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
ITGAV-207ENST00000496477 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
ITGAV-207ENST00000496477 TIE1P35590 1138 aa13.97□□□□□ -0.17
ITGAV-207ENST00000496477 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
ITGAV-207ENST00000496477 SGIP1Q9BQI5 828 aa13.94□□□□□ -0.18
ITGAV-207ENST00000496477 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
ITGAV-207ENST00000496477 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
ITGAV-207ENST00000496477 TTLL13PA6NNM8 815 aa13.89□□□□□ -0.19
ITGAV-207ENST00000496477 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
ITGAV-207ENST00000496477 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
ITGAV-207ENST00000496477 POTEJP0CG39 1038 aa13.85□□□□□ -0.19
ITGAV-207ENST00000496477 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
ITGAV-207ENST00000496477 PYGBP11216 843 aa13.82□□□□□ -0.2
ITGAV-207ENST00000496477 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
ITGAV-207ENST00000496477 CUX2O14529 1486 aa13.81□□□□□ -0.2
ITGAV-207ENST00000496477 MAMSTRQ6ZN01 415 aa13.81□□□□□ -0.2
ITGAV-207ENST00000496477 SEC24BO95487 1268 aa13.78□□□□□ -0.2
ITGAV-207ENST00000496477 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
ITGAV-207ENST00000496477 ERCC6Q03468 1493 aa13.76□□□□□ -0.21
ITGAV-207ENST00000496477 COLQQ9Y215 455 aaPredicted RBP13.76□□□□□ -0.21
ITGAV-207ENST00000496477 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
ITGAV-207ENST00000496477 GSE1Q14687 1217 aa13.74□□□□□ -0.21
ITGAV-207ENST00000496477 IER5LQ5T953 404 aa13.74□□□□□ -0.21
ITGAV-207ENST00000496477 NCAPD3P42695 1498 aa13.73□□□□□ -0.21
ITGAV-207ENST00000496477 PCDHB8Q9UN66 801 aa13.72□□□□□ -0.21
ITGAV-207ENST00000496477 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
ITGAV-207ENST00000496477 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
ITGAV-207ENST00000496477 PLCG2P16885 1265 aa13.62□□□□□ -0.23
ITGAV-207ENST00000496477 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
ITGAV-207ENST00000496477 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
ITGAV-207ENST00000496477 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
ITGAV-207ENST00000496477 POTEMA6NI47 508 aa13.59□□□□□ -0.23
ITGAV-207ENST00000496477 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
ITGAV-207ENST00000496477 SMARCA2P51531 1590 aa13.58□□□□□ -0.24
ITGAV-207ENST00000496477 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
ITGAV-207ENST00000496477 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
ITGAV-207ENST00000496477 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
ITGAV-207ENST00000496477 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
ITGAV-207ENST00000496477 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
ITGAV-207ENST00000496477 NESP48681 1621 aa13.5□□□□□ -0.25
ITGAV-207ENST00000496477 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
ITGAV-207ENST00000496477 PSEN1P49768 467 aa13.49□□□□□ -0.25
ITGAV-207ENST00000496477 LCE2DQ5TA82 110 aaPredicted RBP13.48□□□□□ -0.25
ITGAV-207ENST00000496477 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
ITGAV-207ENST00000496477 PLSCR2Q9NRY7 297 aa13.48□□□□□ -0.25
ITGAV-207ENST00000496477 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
ITGAV-207ENST00000496477 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
ITGAV-207ENST00000496477 MKRN3Q13064 507 aaKnown RBP13.46□□□□□ -0.25
ITGAV-207ENST00000496477 PDAP1Q13442 181 aaKnown RBP13.44□□□□□ -0.26
ITGAV-207ENST00000496477 PDS5BQ9NTI5 1447 aa13.44□□□□□ -0.26
ITGAV-207ENST00000496477 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
ITGAV-207ENST00000496477 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
ITGAV-207ENST00000496477 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
ITGAV-207ENST00000496477 PDCD7Q8N8D1 485 aaKnown RBP13.4□□□□□ -0.26
ITGAV-207ENST00000496477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
ITGAV-207ENST00000496477 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
ITGAV-207ENST00000496477 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
ITGAV-207ENST00000496477 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
ITGAV-207ENST00000496477 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
ITGAV-207ENST00000496477 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
ITGAV-207ENST00000496477 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
ITGAV-207ENST00000496477 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
ITGAV-207ENST00000496477 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
ITGAV-207ENST00000496477 ST18O60284 1047 aa13.29□□□□□ -0.28
ITGAV-207ENST00000496477 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
ITGAV-207ENST00000496477 MROH2BQ7Z745 1585 aa13.26□□□□□ -0.29
ITGAV-207ENST00000496477 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms