RNA–Protein interactions for RNA: ENST00000496410.1

RBM48-203, Transcript of RNA binding motif protein 48, humanhuman

TSL 3

Gene RBM48, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-203ENST00000496410 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
RBM48-203ENST00000496410 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBM48-203ENST00000496410 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
RBM48-203ENST00000496410 NUBP1P53384 320 aa11.91□□□□□ -0.5
RBM48-203ENST00000496410 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
RBM48-203ENST00000496410 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
RBM48-203ENST00000496410 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
RBM48-203ENST00000496410 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
RBM48-203ENST00000496410 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
RBM48-203ENST00000496410 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
RBM48-203ENST00000496410 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
RBM48-203ENST00000496410 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
RBM48-203ENST00000496410 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
RBM48-203ENST00000496410 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
RBM48-203ENST00000496410 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
RBM48-203ENST00000496410 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
RBM48-203ENST00000496410 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
RBM48-203ENST00000496410 PKD2Q13563 968 aa11.7□□□□□ -0.54
RBM48-203ENST00000496410 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
RBM48-203ENST00000496410 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
RBM48-203ENST00000496410 C7P10643 843 aa11.69□□□□□ -0.54
RBM48-203ENST00000496410 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
RBM48-203ENST00000496410 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
RBM48-203ENST00000496410 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
RBM48-203ENST00000496410 GSE1Q14687 1217 aa11.64□□□□□ -0.55
RBM48-203ENST00000496410 PYGBP11216 843 aa11.63□□□□□ -0.55
RBM48-203ENST00000496410 POTEMA6NI47 508 aa11.62□□□□□ -0.55
RBM48-203ENST00000496410 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
RBM48-203ENST00000496410 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
RBM48-203ENST00000496410 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
RBM48-203ENST00000496410 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
RBM48-203ENST00000496410 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
RBM48-203ENST00000496410 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
RBM48-203ENST00000496410 MAP3K13O43283 966 aa11.55□□□□□ -0.56
RBM48-203ENST00000496410 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
RBM48-203ENST00000496410 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
RBM48-203ENST00000496410 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
RBM48-203ENST00000496410 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
RBM48-203ENST00000496410 RGL2O15211 777 aa11.51□□□□□ -0.57
RBM48-203ENST00000496410 SCUBE2Q9NQ36 999 aa11.51□□□□□ -0.57
RBM48-203ENST00000496410 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
RBM48-203ENST00000496410 TIE1P35590 1138 aa11.49□□□□□ -0.57
RBM48-203ENST00000496410 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
RBM48-203ENST00000496410 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
RBM48-203ENST00000496410 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
RBM48-203ENST00000496410 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
RBM48-203ENST00000496410 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
RBM48-203ENST00000496410 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
RBM48-203ENST00000496410 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
RBM48-203ENST00000496410 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
RBM48-203ENST00000496410 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
RBM48-203ENST00000496410 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
RBM48-203ENST00000496410 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
RBM48-203ENST00000496410 SEC24BO95487 1268 aa11.39□□□□□ -0.59
RBM48-203ENST00000496410 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
RBM48-203ENST00000496410 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
RBM48-203ENST00000496410 IER5LQ5T953 404 aa11.35□□□□□ -0.59
RBM48-203ENST00000496410 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
RBM48-203ENST00000496410 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
RBM48-203ENST00000496410 PSEN1P49768 467 aa11.32□□□□□ -0.6
RBM48-203ENST00000496410 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
RBM48-203ENST00000496410 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
RBM48-203ENST00000496410 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
RBM48-203ENST00000496410 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
RBM48-203ENST00000496410 DCAF8L2P0C7V8 631 aa11.28□□□□□ -0.6
RBM48-203ENST00000496410 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
RBM48-203ENST00000496410 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
RBM48-203ENST00000496410 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
RBM48-203ENST00000496410 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
RBM48-203ENST00000496410 STK25O00506 426 aa11.22□□□□□ -0.61
RBM48-203ENST00000496410 SLAIN1Q8ND83 568 aa11.21□□□□□ -0.61
RBM48-203ENST00000496410 PLCG2P16885 1265 aa11.2□□□□□ -0.62
RBM48-203ENST00000496410 HS6ST3Q8IZP7 471 aa11.19□□□□□ -0.62
RBM48-203ENST00000496410 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
RBM48-203ENST00000496410 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
RBM48-203ENST00000496410 IRX5P78411 483 aaPredicted RBP11.17□□□□□ -0.62
RBM48-203ENST00000496410 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
RBM48-203ENST00000496410 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
RBM48-203ENST00000496410 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
RBM48-203ENST00000496410 ST18O60284 1047 aa11.14□□□□□ -0.63
RBM48-203ENST00000496410 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
RBM48-203ENST00000496410 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
RBM48-203ENST00000496410 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
RBM48-203ENST00000496410 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
RBM48-203ENST00000496410 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
RBM48-203ENST00000496410 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
RBM48-203ENST00000496410 MKRN3Q13064 507 aaKnown RBP11.04□□□□□ -0.64
RBM48-203ENST00000496410 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
RBM48-203ENST00000496410 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
RBM48-203ENST00000496410 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
RBM48-203ENST00000496410 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
RBM48-203ENST00000496410 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
RBM48-203ENST00000496410 SNPHO15079 494 aa11.02□□□□□ -0.65
RBM48-203ENST00000496410 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
RBM48-203ENST00000496410 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
RBM48-203ENST00000496410 SOX12O15370 315 aa11.01□□□□□ -0.65
RBM48-203ENST00000496410 PDCD7Q8N8D1 485 aaKnown RBP11.01□□□□□ -0.65
RBM48-203ENST00000496410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.656e-7■■□□□ 12.6
RBM48-203ENST00000496410 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
RBM48-203ENST00000496410 PPP1R37O75864 691 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms