RNA–Protein interactions for RNA: ENST00000495588.2

GAPVD1-218, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-218ENST00000495588 METRNQ9UJH8 293 aa14.1□□□□□ -0.15
GAPVD1-218ENST00000495588 PROM2Q8N271 834 aa14.09□□□□□ -0.15
GAPVD1-218ENST00000495588 ATMINO43313 823 aaPredicted RBP14.08□□□□□ -0.16
GAPVD1-218ENST00000495588 C7P10643 843 aa14.07□□□□□ -0.16
GAPVD1-218ENST00000495588 PLEKHG5O94827 1062 aa14.03□□□□□ -0.16
GAPVD1-218ENST00000495588 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.17
GAPVD1-218ENST00000495588 POTEMA6NI47 508 aa14.01□□□□□ -0.17
GAPVD1-218ENST00000495588 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
GAPVD1-218ENST00000495588 POTEGQ6S5H5 508 aa13.96□□□□□ -0.17
GAPVD1-218ENST00000495588 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
GAPVD1-218ENST00000495588 ATN1P54259 1190 aaPredicted RBP13.94□□□□□ -0.18
GAPVD1-218ENST00000495588 MIER1Q8N108 512 aa13.94□□□□□ -0.18
GAPVD1-218ENST00000495588 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
GAPVD1-218ENST00000495588 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
GAPVD1-218ENST00000495588 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
GAPVD1-218ENST00000495588 MAP3K13O43283 966 aa13.86□□□□□ -0.19
GAPVD1-218ENST00000495588 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
GAPVD1-218ENST00000495588 TIE1P35590 1138 aa13.84□□□□□ -0.19
GAPVD1-218ENST00000495588 PCDH10Q9P2E7 1040 aa13.83□□□□□ -0.2
GAPVD1-218ENST00000495588 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
GAPVD1-218ENST00000495588 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
GAPVD1-218ENST00000495588 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
GAPVD1-218ENST00000495588 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
GAPVD1-218ENST00000495588 SEC24BO95487 1268 aa13.76□□□□□ -0.21
GAPVD1-218ENST00000495588 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
GAPVD1-218ENST00000495588 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
GAPVD1-218ENST00000495588 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
GAPVD1-218ENST00000495588 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
GAPVD1-218ENST00000495588 LCE2DQ5TA82 110 aaPredicted RBP13.7□□□□□ -0.22
GAPVD1-218ENST00000495588 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
GAPVD1-218ENST00000495588 IER5LQ5T953 404 aa13.67□□□□□ -0.22
GAPVD1-218ENST00000495588 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
GAPVD1-218ENST00000495588 NUBP1P53384 320 aa13.64□□□□□ -0.23
GAPVD1-218ENST00000495588 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
GAPVD1-218ENST00000495588 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
GAPVD1-218ENST00000495588 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
GAPVD1-218ENST00000495588 PLCG2P16885 1265 aa13.53□□□□□ -0.24
GAPVD1-218ENST00000495588 SLAIN1Q8ND83 568 aa13.52□□□□□ -0.25
GAPVD1-218ENST00000495588 FKBP8Q14318 412 aa13.49□□□□□ -0.25
GAPVD1-218ENST00000495588 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
GAPVD1-218ENST00000495588 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
GAPVD1-218ENST00000495588 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
GAPVD1-218ENST00000495588 ST18O60284 1047 aa13.41□□□□□ -0.26
GAPVD1-218ENST00000495588 PYGBP11216 843 aa13.41□□□□□ -0.26
GAPVD1-218ENST00000495588 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
GAPVD1-218ENST00000495588 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
GAPVD1-218ENST00000495588 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-218ENST00000495588 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
GAPVD1-218ENST00000495588 SNPHO15079 494 aa13.31□□□□□ -0.28
GAPVD1-218ENST00000495588 TMEM121BQ9BXQ6 578 aaPredicted RBP13.3□□□□□ -0.28
GAPVD1-218ENST00000495588 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
GAPVD1-218ENST00000495588 GSE1Q14687 1217 aa13.25□□□□□ -0.29
GAPVD1-218ENST00000495588 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-218ENST00000495588 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
GAPVD1-218ENST00000495588 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-218ENST00000495588 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
GAPVD1-218ENST00000495588 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-218ENST00000495588 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
GAPVD1-218ENST00000495588 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
GAPVD1-218ENST00000495588 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
GAPVD1-218ENST00000495588 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-218ENST00000495588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.13□□□□□ -0.31
GAPVD1-218ENST00000495588 PSEN1P49768 467 aa13.12□□□□□ -0.31
GAPVD1-218ENST00000495588 MMRN1Q13201 1228 aa13.12□□□□□ -0.31
GAPVD1-218ENST00000495588 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
GAPVD1-218ENST00000495588 EMP3P54852 163 aa13.08□□□□□ -0.32
GAPVD1-218ENST00000495588 PDAP1Q13442 181 aaKnown RBP13.03□□□□□ -0.32
GAPVD1-218ENST00000495588 G3V3G9 751 aa13□□□□□ -0.33
GAPVD1-218ENST00000495588 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-218ENST00000495588 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
GAPVD1-218ENST00000495588 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
GAPVD1-218ENST00000495588 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
GAPVD1-218ENST00000495588 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
GAPVD1-218ENST00000495588 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
GAPVD1-218ENST00000495588 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
GAPVD1-218ENST00000495588 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
GAPVD1-218ENST00000495588 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
GAPVD1-218ENST00000495588 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
GAPVD1-218ENST00000495588 KRTAP3-3Q9BYR6 98 aa12.89□□□□□ -0.35
GAPVD1-218ENST00000495588 KRTAP3-2Q9BYR7 98 aa12.89□□□□□ -0.35
GAPVD1-218ENST00000495588 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
GAPVD1-218ENST00000495588 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
GAPVD1-218ENST00000495588 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
GAPVD1-218ENST00000495588 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
GAPVD1-218ENST00000495588 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
GAPVD1-218ENST00000495588 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
GAPVD1-218ENST00000495588 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
GAPVD1-218ENST00000495588 ERBB3P21860 1342 aa12.77□□□□□ -0.37
GAPVD1-218ENST00000495588 EFCAB3Q8N7B9 438 aa12.75□□□□□ -0.37
GAPVD1-218ENST00000495588 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
GAPVD1-218ENST00000495588 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
GAPVD1-218ENST00000495588 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
GAPVD1-218ENST00000495588 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
GAPVD1-218ENST00000495588 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-218ENST00000495588 SOX12O15370 315 aa12.63□□□□□ -0.39
GAPVD1-218ENST00000495588 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
GAPVD1-218ENST00000495588 TMEM92Q6UXU6 159 aa12.6□□□□□ -0.39
GAPVD1-218ENST00000495588 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.4
GAPVD1-218ENST00000495588 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
GAPVD1-218ENST00000495588 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms