RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 C7P10643 843 aa8.77□□□□□ -1.01
LRIF1-203ENST00000494675 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
LRIF1-203ENST00000494675 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRIF1-203ENST00000494675 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
LRIF1-203ENST00000494675 ST18O60284 1047 aa8.61□□□□□ -1.03
LRIF1-203ENST00000494675 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
LRIF1-203ENST00000494675 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
LRIF1-203ENST00000494675 CREBZFQ9NS37 354 aa8.48□□□□□ -1.05
LRIF1-203ENST00000494675 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
LRIF1-203ENST00000494675 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
LRIF1-203ENST00000494675 PAK3O75914 559 aaPredicted RBP8.46□□□□□ -1.06
LRIF1-203ENST00000494675 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.06
LRIF1-203ENST00000494675 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
LRIF1-203ENST00000494675 ATN1P54259 1190 aaPredicted RBP8.39□□□□□ -1.07
LRIF1-203ENST00000494675 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
LRIF1-203ENST00000494675 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
LRIF1-203ENST00000494675 SLAIN1Q8ND83 568 aa8.35□□□□□ -1.07
LRIF1-203ENST00000494675 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
LRIF1-203ENST00000494675 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
LRIF1-203ENST00000494675 MARVELD3Q96A59 401 aa8.28□□□□□ -1.08
LRIF1-203ENST00000494675 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
LRIF1-203ENST00000494675 COLQQ9Y215 455 aaPredicted RBP8.25□□□□□ -1.09
LRIF1-203ENST00000494675 SNPHO15079 494 aa8.23□□□□□ -1.09
LRIF1-203ENST00000494675 SEC24BO95487 1268 aa8.23□□□□□ -1.09
LRIF1-203ENST00000494675 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
LRIF1-203ENST00000494675 BMP2KQ9NSY1 1161 aaPredicted RBP8.19□□□□□ -1.1
LRIF1-203ENST00000494675 TSPYL2Q9H2G4 693 aaPredicted RBP8.16□□□□□ -1.1
LRIF1-203ENST00000494675 POTEB3A0JP26 581 aa8.15□□□□□ -1.1
LRIF1-203ENST00000494675 POTEBQ6S5H4 581 aa8.15□□□□□ -1.1
LRIF1-203ENST00000494675 EMP3P54852 163 aa8.15□□□□□ -1.11
LRIF1-203ENST00000494675 HS3ST6Q96QI5 342 aa8.14□□□□□ -1.11
LRIF1-203ENST00000494675 CCDC61Q9Y6R9 512 aa8.12□□□□□ -1.11
LRIF1-203ENST00000494675 KIF12Q96FN5 646 aa8.11□□□□□ -1.11
LRIF1-203ENST00000494675 TIE1P35590 1138 aa8.11□□□□□ -1.11
LRIF1-203ENST00000494675 IER5LQ5T953 404 aa8.1□□□□□ -1.11
LRIF1-203ENST00000494675 PROM2Q8N271 834 aa8.1□□□□□ -1.11
LRIF1-203ENST00000494675 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
LRIF1-203ENST00000494675 FAM205CA6NFA0 338 aa8.05□□□□□ -1.12
LRIF1-203ENST00000494675 TRPC6Q9Y210 931 aa8.05□□□□□ -1.12
LRIF1-203ENST00000494675 MAP3K13O43283 966 aa8.04□□□□□ -1.12
LRIF1-203ENST00000494675 MYT1LQ9UL68 1186 aa8.04□□□□□ -1.12
LRIF1-203ENST00000494675 MIER1Q8N108 512 aa8.01□□□□□ -1.13
LRIF1-203ENST00000494675 TTLL13PA6NNM8 815 aa8□□□□□ -1.13
LRIF1-203ENST00000494675 FKBP8Q14318 412 aa7.97□□□□□ -1.13
LRIF1-203ENST00000494675 RASEFQ8IZ41 740 aa7.96□□□□□ -1.13
LRIF1-203ENST00000494675 PLCD3Q8N3E9 789 aa7.96□□□□□ -1.13
LRIF1-203ENST00000494675 SGIP1Q9BQI5 828 aa7.95□□□□□ -1.14
LRIF1-203ENST00000494675 TRIM35Q9UPQ4 493 aa7.95□□□□□ -1.14
LRIF1-203ENST00000494675 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.93□□□□□ -1.14
LRIF1-203ENST00000494675 ZBTB47Q9UFB7 747 aaPredicted RBP7.92□□□□□ -1.14
LRIF1-203ENST00000494675 PCDHB13Q9Y5F0 798 aa7.91□□□□□ -1.14
LRIF1-203ENST00000494675 PLCG2P16885 1265 aa7.91□□□□□ -1.14
LRIF1-203ENST00000494675 PLA2G2EQ9NZK7 142 aa7.88□□□□□ -1.15
LRIF1-203ENST00000494675 PTGER2P43116 358 aa7.88□□□□□ -1.15
LRIF1-203ENST00000494675 FBXO3Q9UK99 471 aa7.87□□□□□ -1.15
LRIF1-203ENST00000494675 TMEM106CQ9BVX2 250 aa7.86□□□□□ -1.15
LRIF1-203ENST00000494675 IFNL1Q8IU54 200 aa7.84□□□□□ -1.15
LRIF1-203ENST00000494675 IRX5P78411 483 aaPredicted RBP7.82□□□□□ -1.16
LRIF1-203ENST00000494675 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
LRIF1-203ENST00000494675 NUBP1P53384 320 aa7.81□□□□□ -1.16
LRIF1-203ENST00000494675 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
LRIF1-203ENST00000494675 OCEL1Q9H607 264 aa7.8□□□□□ -1.16
LRIF1-203ENST00000494675 FAM212AQ96EL1 285 aa7.79□□□□□ -1.16
LRIF1-203ENST00000494675 DCAF8Q5TAQ9 597 aa7.75□□□□□ -1.17
LRIF1-203ENST00000494675 KLHL34Q8N239 644 aa7.75□□□□□ -1.17
LRIF1-203ENST00000494675 IRX2Q9BZI1 471 aaPredicted RBP7.75□□□□□ -1.17
LRIF1-203ENST00000494675 ERBB3P21860 1342 aa7.71□□□□□ -1.18
LRIF1-203ENST00000494675 VASPP50552 380 aaPredicted RBP7.7□□□□□ -1.18
LRIF1-203ENST00000494675 RGS20O76081 388 aa7.68□□□□□ -1.18
LRIF1-203ENST00000494675 HOXB1P14653 301 aaPredicted RBP7.67□□□□□ -1.18
LRIF1-203ENST00000494675 GSE1Q14687 1217 aa7.67□□□□□ -1.18
LRIF1-203ENST00000494675 C3orf67Q6ZVT6 689 aa7.67□□□□□ -1.18
LRIF1-203ENST00000494675 L3MBTL3Q96JM7 780 aaPredicted RBP7.67□□□□□ -1.18
LRIF1-203ENST00000494675 PYGBP11216 843 aa7.66□□□□□ -1.18
LRIF1-203ENST00000494675 PCDHB8Q9UN66 801 aa7.66□□□□□ -1.18
LRIF1-203ENST00000494675 PDCD7Q8N8D1 485 aaKnown RBP7.63□□□□□ -1.19
LRIF1-203ENST00000494675 GOLGA2Q08379 1002 aa7.62□□□□□ -1.19
LRIF1-203ENST00000494675 MKRN3Q13064 507 aaKnown RBP7.62□□□□□ -1.19
LRIF1-203ENST00000494675 HCSTQ9UBK5 93 aa7.62□□□□□ -1.19
LRIF1-203ENST00000494675 ZNF687Q8N1G0 1237 aa7.61□□□□□ -1.19
LRIF1-203ENST00000494675 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
LRIF1-203ENST00000494675 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
LRIF1-203ENST00000494675 HOXB3P14651 431 aaPredicted RBP7.59□□□□□ -1.19
LRIF1-203ENST00000494675 ZNF467Q7Z7K2 595 aaPredicted RBP7.58□□□□□ -1.2
LRIF1-203ENST00000494675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.57□□□□□ -1.26e-7■■■■□ 20.8
LRIF1-203ENST00000494675 CHRM1P11229 460 aaPredicted RBP7.56□□□□□ -1.2
LRIF1-203ENST00000494675 CIZ1Q9ULV3 898 aaPredicted RBP7.56□□□□□ -1.2
LRIF1-203ENST00000494675 ANKRD13DQ6ZTN6 518 aa7.54□□□□□ -1.2
LRIF1-203ENST00000494675 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
LRIF1-203ENST00000494675 IFNLR1Q8IU57 520 aaPredicted RBP7.52□□□□□ -1.21
LRIF1-203ENST00000494675 G3V3G9 751 aa7.5□□□□□ -1.21
LRIF1-203ENST00000494675 PSEN1P49768 467 aa7.5□□□□□ -1.21
LRIF1-203ENST00000494675 ILDR1Q86SU0 546 aaPredicted RBP7.49□□□□□ -1.21
LRIF1-203ENST00000494675 DPY19L2Q6NUT2 758 aa7.48□□□□□ -1.21
LRIF1-203ENST00000494675 Q6ZNB5 142 aa7.48□□□□□ -1.21
LRIF1-203ENST00000494675 TRIM41Q8WV44 630 aa7.48□□□□□ -1.21
LRIF1-203ENST00000494675 PDAP1Q13442 181 aaKnown RBP7.47□□□□□ -1.21
LRIF1-203ENST00000494675 DOK7Q18PE1 504 aa7.47□□□□□ -1.21
LRIF1-203ENST00000494675 BOLA1Q9Y3E2 137 aa7.47□□□□□ -1.21
LRIF1-203ENST00000494675 LSM11P83369 360 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms