RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-212ENST00000494248 PHF12Q96QT6 1004 aa10.56□□□□□ -0.72
PTPN12-212ENST00000494248 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-212ENST00000494248 ST18O60284 1047 aa10.52□□□□□ -0.73
PTPN12-212ENST00000494248 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPN12-212ENST00000494248 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
PTPN12-212ENST00000494248 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
PTPN12-212ENST00000494248 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
PTPN12-212ENST00000494248 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
PTPN12-212ENST00000494248 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
PTPN12-212ENST00000494248 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
PTPN12-212ENST00000494248 SLAIN1Q8ND83 568 aa10.24□□□□□ -0.77
PTPN12-212ENST00000494248 KRTAP3-3Q9BYR6 98 aa10.2□□□□□ -0.78
PTPN12-212ENST00000494248 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
PTPN12-212ENST00000494248 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
PTPN12-212ENST00000494248 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
PTPN12-212ENST00000494248 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
PTPN12-212ENST00000494248 SEC24BO95487 1268 aa10.11□□□□□ -0.79
PTPN12-212ENST00000494248 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPN12-212ENST00000494248 SNPHO15079 494 aa10.01□□□□□ -0.81
PTPN12-212ENST00000494248 RNF166Q96A37 237 aaPredicted RBP10.01□□□□□ -0.81
PTPN12-212ENST00000494248 POTEB3A0JP26 581 aa10□□□□□ -0.81
PTPN12-212ENST00000494248 POTEBQ6S5H4 581 aa10□□□□□ -0.81
PTPN12-212ENST00000494248 TRPC6Q9Y210 931 aa10□□□□□ -0.81
PTPN12-212ENST00000494248 EMP3P54852 163 aa9.99□□□□□ -0.81
PTPN12-212ENST00000494248 HS3ST6Q96QI5 342 aa9.98□□□□□ -0.81
PTPN12-212ENST00000494248 TIE1P35590 1138 aa9.97□□□□□ -0.81
PTPN12-212ENST00000494248 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
PTPN12-212ENST00000494248 IER5LQ5T953 404 aa9.93□□□□□ -0.82
PTPN12-212ENST00000494248 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
PTPN12-212ENST00000494248 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
PTPN12-212ENST00000494248 TTLL13PA6NNM8 815 aa9.89□□□□□ -0.83
PTPN12-212ENST00000494248 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
PTPN12-212ENST00000494248 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
PTPN12-212ENST00000494248 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
PTPN12-212ENST00000494248 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
PTPN12-212ENST00000494248 TRIM35Q9UPQ4 493 aa9.82□□□□□ -0.84
PTPN12-212ENST00000494248 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
PTPN12-212ENST00000494248 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
PTPN12-212ENST00000494248 MAP3K13O43283 966 aa9.74□□□□□ -0.85
PTPN12-212ENST00000494248 PLCG2P16885 1265 aa9.74□□□□□ -0.85
PTPN12-212ENST00000494248 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
PTPN12-212ENST00000494248 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
PTPN12-212ENST00000494248 PROM2Q8N271 834 aa9.6□□□□□ -0.87
PTPN12-212ENST00000494248 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
PTPN12-212ENST00000494248 PTGER2P43116 358 aa9.56□□□□□ -0.88
PTPN12-212ENST00000494248 RASEFQ8IZ41 740 aa9.56□□□□□ -0.88
PTPN12-212ENST00000494248 OCEL1Q9H607 264 aa9.53□□□□□ -0.88
PTPN12-212ENST00000494248 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
PTPN12-212ENST00000494248 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
PTPN12-212ENST00000494248 TMEM106CQ9BVX2 250 aa9.47□□□□□ -0.89
PTPN12-212ENST00000494248 ERBB3P21860 1342 aa9.46□□□□□ -0.9
PTPN12-212ENST00000494248 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
PTPN12-212ENST00000494248 PCDHB13Q9Y5F0 798 aa9.44□□□□□ -0.9
PTPN12-212ENST00000494248 MIER1Q8N108 512 aa9.43□□□□□ -0.9
PTPN12-212ENST00000494248 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
PTPN12-212ENST00000494248 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
PTPN12-212ENST00000494248 IFNL1Q8IU54 200 aa9.39□□□□□ -0.91
PTPN12-212ENST00000494248 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
PTPN12-212ENST00000494248 VARS2Q5ST30 1063 aaKnown RBP9.37□□□□□ -0.91
PTPN12-212ENST00000494248 NUBP1P53384 320 aa9.36□□□□□ -0.91
PTPN12-212ENST00000494248 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
PTPN12-212ENST00000494248 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
PTPN12-212ENST00000494248 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
PTPN12-212ENST00000494248 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
PTPN12-212ENST00000494248 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
PTPN12-212ENST00000494248 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
PTPN12-212ENST00000494248 L3MBTL3Q96JM7 780 aaPredicted RBP9.27□□□□□ -0.93
PTPN12-212ENST00000494248 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
PTPN12-212ENST00000494248 RGS20O76081 388 aa9.25□□□□□ -0.93
PTPN12-212ENST00000494248 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
PTPN12-212ENST00000494248 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
PTPN12-212ENST00000494248 PCDHB8Q9UN66 801 aa9.17□□□□□ -0.94
PTPN12-212ENST00000494248 PYGBP11216 843 aa9.16□□□□□ -0.94
PTPN12-212ENST00000494248 LSM11P83369 360 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN12-212ENST00000494248 ZBTB47Q9UFB7 747 aaPredicted RBP9.14□□□□□ -0.95
PTPN12-212ENST00000494248 Q6ZNB5 142 aa9.11□□□□□ -0.95
PTPN12-212ENST00000494248 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
PTPN12-212ENST00000494248 RIMBP2O15034 1052 aa9.09□□□□□ -0.95
PTPN12-212ENST00000494248 LOC100996750A0A140TA64 210 aa9.05□□□□□ -0.96
PTPN12-212ENST00000494248 KRTAP4-6Q9BYQ5 205 aa9.05□□□□□ -0.96
PTPN12-212ENST00000494248 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
PTPN12-212ENST00000494248 DPY19L2Q6NUT2 758 aa9.01□□□□□ -0.97
PTPN12-212ENST00000494248 ILDR1Q86SU0 546 aaPredicted RBP9□□□□□ -0.97
PTPN12-212ENST00000494248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.977e-7■■■□□ 16.8
PTPN12-212ENST00000494248 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
PTPN12-212ENST00000494248 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
PTPN12-212ENST00000494248 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
PTPN12-212ENST00000494248 A0A0G2JS52 829 aa8.94□□□□□ -0.98
PTPN12-212ENST00000494248 LCE2BO14633 110 aa8.94□□□□□ -0.98
PTPN12-212ENST00000494248 PSEN1P49768 467 aa8.94□□□□□ -0.98
PTPN12-212ENST00000494248 GOLGA2Q08379 1002 aa8.93□□□□□ -0.98
PTPN12-212ENST00000494248 FKBP8Q14318 412 aa8.93□□□□□ -0.98
PTPN12-212ENST00000494248 ZNF467Q7Z7K2 595 aaPredicted RBP8.93□□□□□ -0.98
PTPN12-212ENST00000494248 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
PTPN12-212ENST00000494248 CHRM1P11229 460 aaPredicted RBP8.9□□□□□ -0.98
PTPN12-212ENST00000494248 PBX2P40425 430 aa8.89□□□□□ -0.99
PTPN12-212ENST00000494248 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
PTPN12-212ENST00000494248 G3V3G9 751 aa8.87□□□□□ -0.99
PTPN12-212ENST00000494248 GSE1Q14687 1217 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms