RNA–Protein interactions for RNA: ENST00000494144.5

CCSER2-207, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 1,562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-207ENST00000494144 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CCSER2-207ENST00000494144 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.54
CCSER2-207ENST00000494144 FBLN2P98095 1184 aa11.68□□□□□ -0.54
CCSER2-207ENST00000494144 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
CCSER2-207ENST00000494144 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
CCSER2-207ENST00000494144 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
CCSER2-207ENST00000494144 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.55
CCSER2-207ENST00000494144 ZBTB22O15209 634 aa11.55□□□□□ -0.56
CCSER2-207ENST00000494144 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
CCSER2-207ENST00000494144 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
CCSER2-207ENST00000494144 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
CCSER2-207ENST00000494144 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
CCSER2-207ENST00000494144 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
CCSER2-207ENST00000494144 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
CCSER2-207ENST00000494144 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
CCSER2-207ENST00000494144 MARVELD3Q96A59 401 aa11.4□□□□□ -0.58
CCSER2-207ENST00000494144 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
CCSER2-207ENST00000494144 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
CCSER2-207ENST00000494144 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCSER2-207ENST00000494144 RNF166Q96A37 237 aaPredicted RBP11.31□□□□□ -0.6
CCSER2-207ENST00000494144 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
CCSER2-207ENST00000494144 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
CCSER2-207ENST00000494144 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
CCSER2-207ENST00000494144 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
CCSER2-207ENST00000494144 SNPHO15079 494 aa11.15□□□□□ -0.62
CCSER2-207ENST00000494144 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
CCSER2-207ENST00000494144 SEC24BO95487 1268 aa11.14□□□□□ -0.63
CCSER2-207ENST00000494144 EMP3P54852 163 aa11.14□□□□□ -0.63
CCSER2-207ENST00000494144 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
CCSER2-207ENST00000494144 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CCSER2-207ENST00000494144 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
CCSER2-207ENST00000494144 FAM205CA6NFA0 338 aa11.03□□□□□ -0.64
CCSER2-207ENST00000494144 BCANQ96GW7 911 aa11.03□□□□□ -0.64
CCSER2-207ENST00000494144 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
CCSER2-207ENST00000494144 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
CCSER2-207ENST00000494144 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
CCSER2-207ENST00000494144 FKBP8Q14318 412 aa10.97□□□□□ -0.65
CCSER2-207ENST00000494144 STAG3Q9UJ98 1225 aa10.94□□□□□ -0.66
CCSER2-207ENST00000494144 TRPC6Q9Y210 931 aa10.92□□□□□ -0.66
CCSER2-207ENST00000494144 TIE1P35590 1138 aa10.91□□□□□ -0.66
CCSER2-207ENST00000494144 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCSER2-207ENST00000494144 IER5LQ5T953 404 aa10.9□□□□□ -0.67
CCSER2-207ENST00000494144 ARXQ96QS3 562 aa10.86□□□□□ -0.67
CCSER2-207ENST00000494144 PLA2G2EQ9NZK7 142 aa10.85□□□□□ -0.67
CCSER2-207ENST00000494144 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
CCSER2-207ENST00000494144 TTLL13PA6NNM8 815 aa10.79□□□□□ -0.68
CCSER2-207ENST00000494144 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
CCSER2-207ENST00000494144 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
CCSER2-207ENST00000494144 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
CCSER2-207ENST00000494144 TIMELESSQ9UNS1 1208 aa10.73□□□□□ -0.69
CCSER2-207ENST00000494144 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
CCSER2-207ENST00000494144 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
CCSER2-207ENST00000494144 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
CCSER2-207ENST00000494144 PTGER2P43116 358 aa10.69□□□□□ -0.7
CCSER2-207ENST00000494144 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
CCSER2-207ENST00000494144 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
CCSER2-207ENST00000494144 LOC100996750A0A140TA64 210 aa10.66□□□□□ -0.7
CCSER2-207ENST00000494144 KRTAP4-6Q9BYQ5 205 aa10.66□□□□□ -0.7
CCSER2-207ENST00000494144 PLCG2P16885 1265 aa10.65□□□□□ -0.7
CCSER2-207ENST00000494144 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
CCSER2-207ENST00000494144 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
CCSER2-207ENST00000494144 ERICH6Q7L0X2 663 aa10.58□□□□□ -0.72
CCSER2-207ENST00000494144 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
CCSER2-207ENST00000494144 MAP3K13O43283 966 aa10.54□□□□□ -0.72
CCSER2-207ENST00000494144 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
CCSER2-207ENST00000494144 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
CCSER2-207ENST00000494144 GTF3C3Q9Y5Q9 886 aa10.5□□□□□ -0.73
CCSER2-207ENST00000494144 RGS20O76081 388 aa10.48□□□□□ -0.73
CCSER2-207ENST00000494144 ERBB3P21860 1342 aa10.47□□□□□ -0.73
CCSER2-207ENST00000494144 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.74
CCSER2-207ENST00000494144 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
CCSER2-207ENST00000494144 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
CCSER2-207ENST00000494144 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
CCSER2-207ENST00000494144 HCSTQ9UBK5 93 aa10.38□□□□□ -0.75
CCSER2-207ENST00000494144 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
CCSER2-207ENST00000494144 Q6ZNB5 142 aa10.33□□□□□ -0.76
CCSER2-207ENST00000494144 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
CCSER2-207ENST00000494144 SGIP1Q9BQI5 828 aa10.33□□□□□ -0.76
CCSER2-207ENST00000494144 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
CCSER2-207ENST00000494144 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
CCSER2-207ENST00000494144 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
CCSER2-207ENST00000494144 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
CCSER2-207ENST00000494144 PCDHB13Q9Y5F0 798 aa10.27□□□□□ -0.76
CCSER2-207ENST00000494144 ANKRD13DQ6ZTN6 518 aa10.26□□□□□ -0.77
CCSER2-207ENST00000494144 PROM2Q8N271 834 aa10.26□□□□□ -0.77
CCSER2-207ENST00000494144 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
CCSER2-207ENST00000494144 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.26□□□□□ -0.77
CCSER2-207ENST00000494144 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
CCSER2-207ENST00000494144 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
CCSER2-207ENST00000494144 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CCSER2-207ENST00000494144 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
CCSER2-207ENST00000494144 PKD2Q13563 968 aa10.18□□□□□ -0.78
CCSER2-207ENST00000494144 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
CCSER2-207ENST00000494144 ZNF710Q8N1W2 664 aa10.17□□□□□ -0.78
CCSER2-207ENST00000494144 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
CCSER2-207ENST00000494144 IFNL1Q8IU54 200 aa10.15□□□□□ -0.78
CCSER2-207ENST00000494144 NBR1Q14596 966 aa10.13□□□□□ -0.79
CCSER2-207ENST00000494144 MIER1Q8N108 512 aa10.13□□□□□ -0.79
CCSER2-207ENST00000494144 LCE2BO14633 110 aa10.12□□□□□ -0.79
CCSER2-207ENST00000494144 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms