RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
CPSF7-213ENST00000494016 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
CPSF7-213ENST00000494016 POTEMA6NI47 508 aa11.1□□□□□ -0.63
CPSF7-213ENST00000494016 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
CPSF7-213ENST00000494016 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
CPSF7-213ENST00000494016 NUBP1P53384 320 aa11.07□□□□□ -0.64
CPSF7-213ENST00000494016 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
CPSF7-213ENST00000494016 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
CPSF7-213ENST00000494016 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
CPSF7-213ENST00000494016 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-213ENST00000494016 POTEB2H3BUK9 544 aa10.97□□□□□ -0.65
CPSF7-213ENST00000494016 ZCCHC6Q5VYS8 1495 aaKnown RBP10.97□□□□□ -0.65
CPSF7-213ENST00000494016 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-213ENST00000494016 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
CPSF7-213ENST00000494016 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
CPSF7-213ENST00000494016 GSE1Q14687 1217 aa10.94□□□□□ -0.66
CPSF7-213ENST00000494016 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
CPSF7-213ENST00000494016 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-213ENST00000494016 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-213ENST00000494016 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
CPSF7-213ENST00000494016 RB1CC1Q8TDY2 1594 aa10.91□□□□□ -0.66
CPSF7-213ENST00000494016 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
CPSF7-213ENST00000494016 PKD2Q13563 968 aa10.89□□□□□ -0.67
CPSF7-213ENST00000494016 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
CPSF7-213ENST00000494016 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
CPSF7-213ENST00000494016 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
CPSF7-213ENST00000494016 NACADO15069 1562 aa10.85□□□□□ -0.67
CPSF7-213ENST00000494016 SHROOM4Q9ULL8 1493 aa10.82□□□□□ -0.68
CPSF7-213ENST00000494016 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
CPSF7-213ENST00000494016 PELP1Q8IZL8 1130 aaKnown RBP10.82□□□□□ -0.68
CPSF7-213ENST00000494016 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-213ENST00000494016 UNC13AQ9UPW8 1703 aa10.79□□□□□ -0.68
CPSF7-213ENST00000494016 PYGBP11216 843 aa10.78□□□□□ -0.68
CPSF7-213ENST00000494016 DCAF1Q9Y4B6 1507 aa10.77□□□□□ -0.69
CPSF7-213ENST00000494016 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
CPSF7-213ENST00000494016 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
CPSF7-213ENST00000494016 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
CPSF7-213ENST00000494016 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
CPSF7-213ENST00000494016 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
CPSF7-213ENST00000494016 MAP3K13O43283 966 aa10.72□□□□□ -0.69
CPSF7-213ENST00000494016 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
CPSF7-213ENST00000494016 MYO15BQ96JP2 1530 aa10.72□□□□□ -0.69
CPSF7-213ENST00000494016 C7P10643 843 aa10.71□□□□□ -0.69
CPSF7-213ENST00000494016 ASTLQ6HA08 431 aaPredicted RBP10.71□□□□□ -0.69
CPSF7-213ENST00000494016 SLC39A7Q92504 469 aa10.71□□□□□ -0.69
CPSF7-213ENST00000494016 RGL2O15211 777 aa10.7□□□□□ -0.7
CPSF7-213ENST00000494016 RNF25Q96BH1 459 aaPredicted RBP10.7□□□□□ -0.7
CPSF7-213ENST00000494016 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
CPSF7-213ENST00000494016 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
CPSF7-213ENST00000494016 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
CPSF7-213ENST00000494016 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
CPSF7-213ENST00000494016 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
CPSF7-213ENST00000494016 ZNF467Q7Z7K2 595 aaPredicted RBP10.67□□□□□ -0.7
CPSF7-213ENST00000494016 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
CPSF7-213ENST00000494016 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
CPSF7-213ENST00000494016 SLC24A1O60721 1099 aa10.66□□□□□ -0.7
CPSF7-213ENST00000494016 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
CPSF7-213ENST00000494016 SCUBE2Q9NQ36 999 aa10.66□□□□□ -0.7
CPSF7-213ENST00000494016 PCDHB8Q9UN66 801 aa10.65□□□□□ -0.7
CPSF7-213ENST00000494016 VGFO15240 615 aaPredicted RBP10.59□□□□□ -0.71
CPSF7-213ENST00000494016 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
CPSF7-213ENST00000494016 ATN1P54259 1190 aaPredicted RBP10.58□□□□□ -0.72
CPSF7-213ENST00000494016 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
CPSF7-213ENST00000494016 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
CPSF7-213ENST00000494016 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
CPSF7-213ENST00000494016 PSEN1P49768 467 aa10.55□□□□□ -0.72
CPSF7-213ENST00000494016 CDAN1Q8IWY9 1227 aa10.54□□□□□ -0.72
CPSF7-213ENST00000494016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-213ENST00000494016 TIE1P35590 1138 aa10.53□□□□□ -0.72
CPSF7-213ENST00000494016 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-213ENST00000494016 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
CPSF7-213ENST00000494016 BMP2KQ9NSY1 1161 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-213ENST00000494016 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
CPSF7-213ENST00000494016 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
CPSF7-213ENST00000494016 TTLL13PA6NNM8 815 aa10.48□□□□□ -0.73
CPSF7-213ENST00000494016 STK25O00506 426 aa10.48□□□□□ -0.73
CPSF7-213ENST00000494016 CHGAP10645 457 aaKnown RBP10.48□□□□□ -0.73
CPSF7-213ENST00000494016 POTEFA5A3E0 1075 aa10.47□□□□□ -0.73
CPSF7-213ENST00000494016 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-213ENST00000494016 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
CPSF7-213ENST00000494016 SEC24BO95487 1268 aa10.44□□□□□ -0.74
CPSF7-213ENST00000494016 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
CPSF7-213ENST00000494016 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
CPSF7-213ENST00000494016 TRIM35Q9UPQ4 493 aa10.4□□□□□ -0.74
CPSF7-213ENST00000494016 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
CPSF7-213ENST00000494016 BBXQ8WY36 941 aaPredicted RBP10.37□□□□□ -0.75
CPSF7-213ENST00000494016 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
CPSF7-213ENST00000494016 EIF4G1Q04637 1599 aaKnown RBP10.36□□□□□ -0.75
CPSF7-213ENST00000494016 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
CPSF7-213ENST00000494016 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
CPSF7-213ENST00000494016 MKRN3Q13064 507 aaKnown RBP10.34□□□□□ -0.75
CPSF7-213ENST00000494016 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
CPSF7-213ENST00000494016 IER5LQ5T953 404 aa10.33□□□□□ -0.76
CPSF7-213ENST00000494016 SOX12O15370 315 aa10.32□□□□□ -0.76
CPSF7-213ENST00000494016 ST18O60284 1047 aa10.32□□□□□ -0.76
CPSF7-213ENST00000494016 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
CPSF7-213ENST00000494016 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
CPSF7-213ENST00000494016 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-213ENST00000494016 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
CPSF7-213ENST00000494016 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms