RNA–Protein interactions for RNA: ENST00000493733.1

PCOLCE2-209, Transcript of procollagen C-endopeptidase enhancer 2, humanhuman

TSL 4

Gene PCOLCE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE2-209ENST00000493733 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
PCOLCE2-209ENST00000493733 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
PCOLCE2-209ENST00000493733 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
PCOLCE2-209ENST00000493733 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
PCOLCE2-209ENST00000493733 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
PCOLCE2-209ENST00000493733 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
PCOLCE2-209ENST00000493733 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
PCOLCE2-209ENST00000493733 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
PCOLCE2-209ENST00000493733 NUBP1P53384 320 aa12.28□□□□□ -0.44
PCOLCE2-209ENST00000493733 GSE1Q14687 1217 aa12.27□□□□□ -0.45
PCOLCE2-209ENST00000493733 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
PCOLCE2-209ENST00000493733 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
PCOLCE2-209ENST00000493733 BCANQ96GW7 911 aa12.26□□□□□ -0.45
PCOLCE2-209ENST00000493733 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
PCOLCE2-209ENST00000493733 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
PCOLCE2-209ENST00000493733 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
PCOLCE2-209ENST00000493733 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
PCOLCE2-209ENST00000493733 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
PCOLCE2-209ENST00000493733 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
PCOLCE2-209ENST00000493733 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
PCOLCE2-209ENST00000493733 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
PCOLCE2-209ENST00000493733 BAZ1AQ9NRL2 1556 aaPredicted RBP12.19□□□□□ -0.46
PCOLCE2-209ENST00000493733 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
PCOLCE2-209ENST00000493733 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
PCOLCE2-209ENST00000493733 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
PCOLCE2-209ENST00000493733 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
PCOLCE2-209ENST00000493733 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
PCOLCE2-209ENST00000493733 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
PCOLCE2-209ENST00000493733 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
PCOLCE2-209ENST00000493733 WIZO95785 1651 aa12.1□□□□□ -0.47
PCOLCE2-209ENST00000493733 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
PCOLCE2-209ENST00000493733 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
PCOLCE2-209ENST00000493733 NKX1-1Q15270 411 aaPredicted RBP12.05□□□□□ -0.48
PCOLCE2-209ENST00000493733 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
PCOLCE2-209ENST00000493733 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
PCOLCE2-209ENST00000493733 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
PCOLCE2-209ENST00000493733 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
PCOLCE2-209ENST00000493733 STK25O00506 426 aa12.02□□□□□ -0.49
PCOLCE2-209ENST00000493733 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
PCOLCE2-209ENST00000493733 PYGBP11216 843 aa11.99□□□□□ -0.49
PCOLCE2-209ENST00000493733 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
PCOLCE2-209ENST00000493733 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
PCOLCE2-209ENST00000493733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.95□□□□□ -0.5
PCOLCE2-209ENST00000493733 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
PCOLCE2-209ENST00000493733 CHADLQ6NUI6 762 aa11.93□□□□□ -0.5
PCOLCE2-209ENST00000493733 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
PCOLCE2-209ENST00000493733 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
PCOLCE2-209ENST00000493733 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
PCOLCE2-209ENST00000493733 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
PCOLCE2-209ENST00000493733 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
PCOLCE2-209ENST00000493733 SMARCA2P51531 1590 aa11.91□□□□□ -0.5
PCOLCE2-209ENST00000493733 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
PCOLCE2-209ENST00000493733 TSPYL2Q9H2G4 693 aaPredicted RBP11.86□□□□□ -0.51
PCOLCE2-209ENST00000493733 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
PCOLCE2-209ENST00000493733 NBR1Q14596 966 aa11.83□□□□□ -0.52
PCOLCE2-209ENST00000493733 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
PCOLCE2-209ENST00000493733 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
PCOLCE2-209ENST00000493733 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
PCOLCE2-209ENST00000493733 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
PCOLCE2-209ENST00000493733 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
PCOLCE2-209ENST00000493733 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
PCOLCE2-209ENST00000493733 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
PCOLCE2-209ENST00000493733 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
PCOLCE2-209ENST00000493733 CCDC61Q9Y6R9 512 aa11.75□□□□□ -0.53
PCOLCE2-209ENST00000493733 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
PCOLCE2-209ENST00000493733 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCOLCE2-209ENST00000493733 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
PCOLCE2-209ENST00000493733 PSEN1P49768 467 aa11.67□□□□□ -0.54
PCOLCE2-209ENST00000493733 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
PCOLCE2-209ENST00000493733 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
PCOLCE2-209ENST00000493733 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
PCOLCE2-209ENST00000493733 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
PCOLCE2-209ENST00000493733 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
PCOLCE2-209ENST00000493733 CC2D2AQ9P2K1 1620 aa11.61□□□□□ -0.55
PCOLCE2-209ENST00000493733 MAP3K13O43283 966 aa11.6□□□□□ -0.55
PCOLCE2-209ENST00000493733 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
PCOLCE2-209ENST00000493733 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
PCOLCE2-209ENST00000493733 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
PCOLCE2-209ENST00000493733 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
PCOLCE2-209ENST00000493733 LOC105371045A0A1W2PR82 267 aa11.58□□□□□ -0.56
PCOLCE2-209ENST00000493733 CFTRP13569 1480 aa11.57□□□□□ -0.56
PCOLCE2-209ENST00000493733 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
PCOLCE2-209ENST00000493733 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
PCOLCE2-209ENST00000493733 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
PCOLCE2-209ENST00000493733 KCNV2Q8TDN2 545 aa11.54□□□□□ -0.56
PCOLCE2-209ENST00000493733 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
PCOLCE2-209ENST00000493733 PPP1R37O75864 691 aa11.53□□□□□ -0.56
PCOLCE2-209ENST00000493733 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
PCOLCE2-209ENST00000493733 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
PCOLCE2-209ENST00000493733 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
PCOLCE2-209ENST00000493733 SOX12O15370 315 aa11.5□□□□□ -0.57
PCOLCE2-209ENST00000493733 NLRP6P59044 892 aa11.5□□□□□ -0.57
PCOLCE2-209ENST00000493733 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
PCOLCE2-209ENST00000493733 EEA1Q15075 1411 aa11.5□□□□□ -0.57
PCOLCE2-209ENST00000493733 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
PCOLCE2-209ENST00000493733 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
PCOLCE2-209ENST00000493733 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
PCOLCE2-209ENST00000493733 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
PCOLCE2-209ENST00000493733 SOGA1O94964 1423 aa11.47□□□□□ -0.57
PCOLCE2-209ENST00000493733 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms