RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
SND1-216ENST00000492840 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
SND1-216ENST00000492840 ARXQ96QS3 562 aa10.21□□□□□ -0.77
SND1-216ENST00000492840 GTPBP6O43824 516 aaPredicted RBP10.19□□□□□ -0.78
SND1-216ENST00000492840 TMEM132AQ24JP5 1023 aa10.18□□□□□ -0.78
SND1-216ENST00000492840 GSE1Q14687 1217 aa10.16□□□□□ -0.78
SND1-216ENST00000492840 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
SND1-216ENST00000492840 DAXXQ9UER7 740 aaPredicted RBP10.13□□□□□ -0.79
SND1-216ENST00000492840 DSG3P32926 999 aa10.12□□□□□ -0.79
SND1-216ENST00000492840 NUBP1P53384 320 aa10.09□□□□□ -0.79
SND1-216ENST00000492840 STK25O00506 426 aa10.08□□□□□ -0.8
SND1-216ENST00000492840 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
SND1-216ENST00000492840 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
SND1-216ENST00000492840 DCAF8Q5TAQ9 597 aa10.03□□□□□ -0.8
SND1-216ENST00000492840 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
SND1-216ENST00000492840 HOMEZQ8IX15 550 aa10□□□□□ -0.81
SND1-216ENST00000492840 RYDENQ9NUL5 291 aaKnown RBP10□□□□□ -0.81
SND1-216ENST00000492840 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
SND1-216ENST00000492840 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
SND1-216ENST00000492840 STK24Q9Y6E0 443 aa9.97□□□□□ -0.81
SND1-216ENST00000492840 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
SND1-216ENST00000492840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
SND1-216ENST00000492840 CHRM1P11229 460 aaPredicted RBP9.95□□□□□ -0.82
SND1-216ENST00000492840 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
SND1-216ENST00000492840 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
SND1-216ENST00000492840 NISCHQ9Y2I1 1504 aa9.95□□□□□ -0.82
SND1-216ENST00000492840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
SND1-216ENST00000492840 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
SND1-216ENST00000492840 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
SND1-216ENST00000492840 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
SND1-216ENST00000492840 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
SND1-216ENST00000492840 RASEFQ8IZ41 740 aa9.86□□□□□ -0.83
SND1-216ENST00000492840 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
SND1-216ENST00000492840 CREBZFQ9NS37 354 aa9.85□□□□□ -0.83
SND1-216ENST00000492840 PYGBP11216 843 aa9.81□□□□□ -0.84
SND1-216ENST00000492840 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
SND1-216ENST00000492840 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
SND1-216ENST00000492840 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
SND1-216ENST00000492840 SUPT5HO00267 1087 aaKnown RBP9.74□□□□□ -0.85
SND1-216ENST00000492840 ARHGEF1Q92888 912 aaKnown RBP9.74□□□□□ -0.85
SND1-216ENST00000492840 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
SND1-216ENST00000492840 SLC24A3Q9HC58 644 aa9.73□□□□□ -0.85
SND1-216ENST00000492840 CLEC11AQ9Y240 323 aa9.71□□□□□ -0.86
SND1-216ENST00000492840 TESPA1A2RU30 521 aaPredicted RBP9.69□□□□□ -0.86
SND1-216ENST00000492840 ABCC9O60706 1549 aa9.68□□□□□ -0.86
SND1-216ENST00000492840 ZNF467Q7Z7K2 595 aaPredicted RBP9.68□□□□□ -0.86
SND1-216ENST00000492840 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
SND1-216ENST00000492840 SEMA3EO15041 775 aa9.67□□□□□ -0.86
SND1-216ENST00000492840 PDAP1Q13442 181 aaKnown RBP9.66□□□□□ -0.86
SND1-216ENST00000492840 E2F4Q16254 413 aa9.66□□□□□ -0.86
SND1-216ENST00000492840 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
SND1-216ENST00000492840 ZMYND10O75800 440 aa9.63□□□□□ -0.87
SND1-216ENST00000492840 PPP1R37O75864 691 aa9.6□□□□□ -0.87
SND1-216ENST00000492840 PCDHB8Q9UN66 801 aa9.59□□□□□ -0.87
SND1-216ENST00000492840 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
SND1-216ENST00000492840 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
SND1-216ENST00000492840 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
SND1-216ENST00000492840 PSEN1P49768 467 aa9.57□□□□□ -0.88
SND1-216ENST00000492840 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
SND1-216ENST00000492840 FBXO22Q8NEZ5 403 aa9.56□□□□□ -0.88
SND1-216ENST00000492840 PODXL2Q9NZ53 605 aa9.56□□□□□ -0.88
SND1-216ENST00000492840 SMYD5Q6GMV2 418 aa9.55□□□□□ -0.88
SND1-216ENST00000492840 TSPYL2Q9H2G4 693 aaPredicted RBP9.55□□□□□ -0.88
SND1-216ENST00000492840 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
SND1-216ENST00000492840 UBTFP17480 764 aaKnown RBP9.52□□□□□ -0.89
SND1-216ENST00000492840 NLRP6P59044 892 aa9.52□□□□□ -0.89
SND1-216ENST00000492840 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
SND1-216ENST00000492840 AK7Q96M32 723 aa9.5□□□□□ -0.89
SND1-216ENST00000492840 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
SND1-216ENST00000492840 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
SND1-216ENST00000492840 MFSD10Q14728 455 aa9.49□□□□□ -0.89
SND1-216ENST00000492840 EFCAB3Q8N7B9 438 aa9.49□□□□□ -0.89
SND1-216ENST00000492840 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
SND1-216ENST00000492840 PITPNM1O00562 1244 aa9.48□□□□□ -0.89
SND1-216ENST00000492840 SOX12O15370 315 aa9.48□□□□□ -0.89
SND1-216ENST00000492840 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
SND1-216ENST00000492840 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
SND1-216ENST00000492840 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
SND1-216ENST00000492840 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
SND1-216ENST00000492840 CABP2Q9NPB3 220 aa9.45□□□□□ -0.9
SND1-216ENST00000492840 PDE4AP27815 886 aa9.44□□□□□ -0.9
SND1-216ENST00000492840 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
SND1-216ENST00000492840 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
SND1-216ENST00000492840 CRISPLD2Q9H0B8 497 aa9.44□□□□□ -0.9
SND1-216ENST00000492840 KDM4CQ9H3R0 1056 aa9.44□□□□□ -0.9
SND1-216ENST00000492840 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
SND1-216ENST00000492840 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
SND1-216ENST00000492840 POTEDQ86YR6 584 aa9.43□□□□□ -0.9
SND1-216ENST00000492840 RBM26Q5T8P6 1007 aaKnown RBP9.42□□□□□ -0.9
SND1-216ENST00000492840 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
SND1-216ENST00000492840 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
SND1-216ENST00000492840 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
SND1-216ENST00000492840 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
SND1-216ENST00000492840 FARP1Q9Y4F1 1045 aaPredicted RBP9.4□□□□□ -0.9
SND1-216ENST00000492840 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
SND1-216ENST00000492840 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
SND1-216ENST00000492840 TRIM26Q12899 539 aaPredicted RBP9.39□□□□□ -0.91
SND1-216ENST00000492840 TRIM66O15016 1216 aa9.38□□□□□ -0.91
SND1-216ENST00000492840 PDE4DQ08499 809 aa9.38□□□□□ -0.91
SND1-216ENST00000492840 MS4A4AQ96JQ5 239 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms