RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	MS4A3	Q96HJ5	214 aa		11.87	□□□□□ -0.51
GCFC2-210	ENST00000492826	SPDYE4	A6NLX3	237 aa		11.85	□□□□□ -0.51
GCFC2-210	ENST00000492826	NPM1	P06748	294 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
GCFC2-210	ENST00000492826	PCDH10	Q9P2E7	1040 aa		11.85	□□□□□ -0.51
GCFC2-210	ENST00000492826	C7	P10643	843 aa		11.83	□□□□□ -0.52
GCFC2-210	ENST00000492826	SLC39A7	Q92504	469 aa		11.82	□□□□□ -0.52
GCFC2-210	ENST00000492826	MAMSTR	Q6ZN01	415 aa		11.75	□□□□□ -0.53
GCFC2-210	ENST00000492826	ATN1	P54259	1190 aa	Predicted RBP	11.73	□□□□□ -0.53
GCFC2-210	ENST00000492826	POTEF	A5A3E0	1075 aa		11.72	□□□□□ -0.53
GCFC2-210	ENST00000492826	FAM163A	Q96GL9	167 aa	Predicted RBP	11.7	□□□□□ -0.54
GCFC2-210	ENST00000492826	CCDC61	Q9Y6R9	512 aa		11.7	□□□□□ -0.54
GCFC2-210	ENST00000492826	KIF12	Q96FN5	646 aa		11.66	□□□□□ -0.54
GCFC2-210	ENST00000492826	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.66	□□□□□ -0.54
GCFC2-210	ENST00000492826	SCUBE2	Q9NQ36	999 aa		11.66	□□□□□ -0.54
GCFC2-210	ENST00000492826	TRPC6	Q9Y210	931 aa		11.65	□□□□□ -0.54
GCFC2-210	ENST00000492826	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.64	□□□□□ -0.55
GCFC2-210	ENST00000492826	PROM2	Q8N271	834 aa		11.58	□□□□□ -0.56
GCFC2-210	ENST00000492826	COLQ	Q9Y215	455 aa	Predicted RBP	11.56	□□□□□ -0.56
GCFC2-210	ENST00000492826	TIE1	P35590	1138 aa		11.55	□□□□□ -0.56
GCFC2-210	ENST00000492826	MAP3K13	O43283	966 aa		11.54	□□□□□ -0.56
GCFC2-210	ENST00000492826	TTLL13P	A6NNM8	815 aa		11.49	□□□□□ -0.57
GCFC2-210	ENST00000492826	CDAN1	Q8IWY9	1227 aa		11.49	□□□□□ -0.57
GCFC2-210	ENST00000492826	RASEF	Q8IZ41	740 aa		11.48	□□□□□ -0.57
GCFC2-210	ENST00000492826	SEC24B	O95487	1268 aa		11.43	□□□□□ -0.58
GCFC2-210	ENST00000492826	IER5L	Q5T953	404 aa		11.4	□□□□□ -0.58
GCFC2-210	ENST00000492826	TRIM35	Q9UPQ4	493 aa		11.4	□□□□□ -0.58
GCFC2-210	ENST00000492826	ST18	O60284	1047 aa		11.38	□□□□□ -0.59
GCFC2-210	ENST00000492826	EHMT2	Q96KQ7	1210 aa		11.37	□□□□□ -0.59
GCFC2-210	ENST00000492826	SGIP1	Q9BQI5	828 aa		11.35	□□□□□ -0.59
GCFC2-210	ENST00000492826	MIER1	Q8N108	512 aa		11.34	□□□□□ -0.59
GCFC2-210	ENST00000492826	SLAIN1	Q8ND83	568 aa		11.34	□□□□□ -0.59
GCFC2-210	ENST00000492826	PCDHB13	Q9Y5F0	798 aa		11.31	□□□□□ -0.6
GCFC2-210	ENST00000492826	IFNL1	Q8IU54	200 aa		11.29	□□□□□ -0.6
GCFC2-210	ENST00000492826	PLEKHG5	O94827	1062 aa		11.28	□□□□□ -0.6
GCFC2-210	ENST00000492826	MMRN1	Q13201	1228 aa		11.27	□□□□□ -0.61
GCFC2-210	ENST00000492826	NUBP1	P53384	320 aa		11.26	□□□□□ -0.61
GCFC2-210	ENST00000492826	IRX5	P78411	483 aa	Predicted RBP	11.25	□□□□□ -0.61
GCFC2-210	ENST00000492826	SPNS2	Q8IVW8	549 aa		11.25	□□□□□ -0.61
GCFC2-210	ENST00000492826	TMEM106C	Q9BVX2	250 aa		11.23	□□□□□ -0.61
GCFC2-210	ENST00000492826	PLCG2	P16885	1265 aa		11.21	□□□□□ -0.61
GCFC2-210	ENST00000492826	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.19	□□□□□ -0.62
GCFC2-210	ENST00000492826	PLCD3	Q8N3E9	789 aa		11.16	□□□□□ -0.62
GCFC2-210	ENST00000492826	MARVELD3	Q96A59	401 aa		11.13	□□□□□ -0.63
GCFC2-210	ENST00000492826	OCEL1	Q9H607	264 aa		11.13	□□□□□ -0.63
GCFC2-210	ENST00000492826	SNPH	O15079	494 aa		11.09	□□□□□ -0.63
GCFC2-210	ENST00000492826	FAM212A	Q96EL1	285 aa		11.09	□□□□□ -0.63
GCFC2-210	ENST00000492826	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.09	□□□□□ -0.63
GCFC2-210	ENST00000492826	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.07	□□□□□ -0.64
GCFC2-210	ENST00000492826	POTEB3	A0JP26	581 aa		11.03	□□□□□ -0.64
GCFC2-210	ENST00000492826	POTEB	Q6S5H4	581 aa		11.03	□□□□□ -0.64
GCFC2-210	ENST00000492826	PDCD7	Q8N8D1	485 aa	Known RBP	11.02	□□□□□ -0.65
GCFC2-210	ENST00000492826	KRTAP3-3	Q9BYR6	98 aa		11.02	□□□□□ -0.65
GCFC2-210	ENST00000492826	KRTAP3-2	Q9BYR7	98 aa		11.02	□□□□□ -0.65
GCFC2-210	ENST00000492826	PCDHB8	Q9UN66	801 aa		11.01	□□□□□ -0.65
GCFC2-210	ENST00000492826	PYGB	P11216	843 aa		11	□□□□□ -0.65
GCFC2-210	ENST00000492826	EMP3	P54852	163 aa		10.97	□□□□□ -0.65
GCFC2-210	ENST00000492826	DCAF8	Q5TAQ9	597 aa		10.94	□□□□□ -0.66
GCFC2-210	ENST00000492826	HS3ST6	Q96QI5	342 aa		10.94	□□□□□ -0.66
GCFC2-210	ENST00000492826	FAM205C	A6NFA0	338 aa		10.9	□□□□□ -0.66
GCFC2-210	ENST00000492826	C3orf67	Q6ZVT6	689 aa		10.9	□□□□□ -0.66
GCFC2-210	ENST00000492826	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.88	□□□□□ -0.67
GCFC2-210	ENST00000492826	ILDR1	Q86SU0	546 aa	Predicted RBP	10.84	□□□□□ -0.67
GCFC2-210	ENST00000492826	MKRN3	Q13064	507 aa	Known RBP	10.82	□□□□□ -0.68
GCFC2-210	ENST00000492826	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	1e-6	■■■■□ 25.6
GCFC2-210	ENST00000492826	HOXB3	P14651	431 aa	Predicted RBP	10.81	□□□□□ -0.68
GCFC2-210	ENST00000492826	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.8	□□□□□ -0.68
GCFC2-210	ENST00000492826	DPY19L2	Q6NUT2	758 aa		10.78	□□□□□ -0.68
GCFC2-210	ENST00000492826	GOLGA2	Q08379	1002 aa		10.77	□□□□□ -0.69
GCFC2-210	ENST00000492826	CHRM1	P11229	460 aa	Predicted RBP	10.75	□□□□□ -0.69
GCFC2-210	ENST00000492826	PSEN1	P49768	467 aa		10.75	□□□□□ -0.69
GCFC2-210	ENST00000492826	HOXB1	P14653	301 aa	Predicted RBP	10.73	□□□□□ -0.69
GCFC2-210	ENST00000492826	FKBP8	Q14318	412 aa		10.73	□□□□□ -0.69
GCFC2-210	ENST00000492826	GSE1	Q14687	1217 aa		10.72	□□□□□ -0.69
GCFC2-210	ENST00000492826	BOLA1	Q9Y3E2	137 aa		10.68	□□□□□ -0.7
GCFC2-210	ENST00000492826	RNF166	Q96A37	237 aa	Predicted RBP	10.66	□□□□□ -0.7
GCFC2-210	ENST00000492826	ERBB3	P21860	1342 aa		10.64	□□□□□ -0.71
GCFC2-210	ENST00000492826	PDAP1	Q13442	181 aa	Known RBP	10.64	□□□□□ -0.71
GCFC2-210	ENST00000492826	ZNF710	Q8N1W2	664 aa		10.62	□□□□□ -0.71
GCFC2-210	ENST00000492826	CABP2	Q9NPB3	220 aa		10.62	□□□□□ -0.71
GCFC2-210	ENST00000492826	FBXO3	Q9UK99	471 aa		10.62	□□□□□ -0.71
GCFC2-210	ENST00000492826	DOK7	Q18PE1	504 aa		10.61	□□□□□ -0.71
GCFC2-210	ENST00000492826	KLHL34	Q8N239	644 aa		10.6	□□□□□ -0.71
GCFC2-210	ENST00000492826	VARS2	Q5ST30	1063 aa	Known RBP	10.59	□□□□□ -0.71
GCFC2-210	ENST00000492826	MYT1L	Q9UL68	1186 aa		10.59	□□□□□ -0.71
GCFC2-210	ENST00000492826	VASP	P50552	380 aa	Predicted RBP	10.58	□□□□□ -0.72
GCFC2-210	ENST00000492826		G3V3G9	751 aa		10.56	□□□□□ -0.72
GCFC2-210	ENST00000492826	ZNF687	Q8N1G0	1237 aa		10.54	□□□□□ -0.72
GCFC2-210	ENST00000492826	TMEM92	Q6UXU6	159 aa		10.53	□□□□□ -0.72
GCFC2-210	ENST00000492826	RIMBP2	O15034	1052 aa		10.5	□□□□□ -0.73
GCFC2-210	ENST00000492826	GPR153	Q6NV75	609 aa		10.5	□□□□□ -0.73
GCFC2-210	ENST00000492826	ZSWIM6	Q9HCJ5	1215 aa		10.49	□□□□□ -0.73
GCFC2-210	ENST00000492826	EFCAB3	Q8N7B9	438 aa		10.46	□□□□□ -0.73
GCFC2-210	ENST00000492826	MICALL2	Q8IY33	904 aa		10.45	□□□□□ -0.74
GCFC2-210	ENST00000492826	PTGER2	P43116	358 aa		10.44	□□□□□ -0.74
GCFC2-210	ENST00000492826	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.4	□□□□□ -0.74
GCFC2-210	ENST00000492826	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.39	□□□□□ -0.75
GCFC2-210	ENST00000492826	SPOCK2	Q92563	424 aa		10.39	□□□□□ -0.75
GCFC2-210	ENST00000492826	ARSI	Q5FYB1	569 aa		10.38	□□□□□ -0.75
GCFC2-210	ENST00000492826	ANKRD13D	Q6ZTN6	518 aa		10.38	□□□□□ -0.75
GCFC2-210	ENST00000492826	MS4A4A	Q96JQ5	239 aa		10.37	□□□□□ -0.75

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