RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 CNKSR2Q8WXI2 1034 aa9.16□□□□□ -0.94
UBP1-212ENST00000492136 CFAP44Q96MT7 982 aa9.13□□□□□ -0.95
UBP1-212ENST00000492136 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
UBP1-212ENST00000492136 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBP1-212ENST00000492136 ACIN1Q9UKV3 1341 aaKnown RBP9.12□□□□□ -0.95
UBP1-212ENST00000492136 GOLGA2Q08379 1002 aa9.12□□□□□ -0.95
UBP1-212ENST00000492136 NEUROD2Q15784 382 aa9.11□□□□□ -0.95
UBP1-212ENST00000492136 FAM9BQ8IZU0 186 aa9.11□□□□□ -0.95
UBP1-212ENST00000492136 TRIM44Q96DX7 344 aaPredicted RBP9.1□□□□□ -0.95
UBP1-212ENST00000492136 TNNT2P45379 298 aaPredicted RBP9.09□□□□□ -0.95
UBP1-212ENST00000492136 MSH5O43196 834 aa9.08□□□□□ -0.96
UBP1-212ENST00000492136 HNRNPUQ00839 825 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBP1-212ENST00000492136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.07□□□□□ -0.96
UBP1-212ENST00000492136 DNTTIP2Q5QJE6 756 aaKnown RBP9.07□□□□□ -0.96
UBP1-212ENST00000492136 IRX6P78412 446 aaPredicted RBP9.06□□□□□ -0.96
UBP1-212ENST00000492136 CCDC136Q96JN2 1154 aa9.06□□□□□ -0.96
UBP1-212ENST00000492136 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
UBP1-212ENST00000492136 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
UBP1-212ENST00000492136 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
UBP1-212ENST00000492136 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
UBP1-212ENST00000492136 PTMAP06454 111 aaKnown RBP9.03□□□□□ -0.96
UBP1-212ENST00000492136 NAP1L2Q9ULW6 460 aaPredicted RBP9.03□□□□□ -0.96
UBP1-212ENST00000492136 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
UBP1-212ENST00000492136 G3V3G9 751 aa9.02□□□□□ -0.96
UBP1-212ENST00000492136 DCAF8Q5TAQ9 597 aa9.02□□□□□ -0.96
UBP1-212ENST00000492136 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.02□□□□□ -0.96
UBP1-212ENST00000492136 MEX3CQ5U5Q3 659 aaKnown RBP9.02□□□□□ -0.97
UBP1-212ENST00000492136 PPP1R1BQ9UD71 204 aaPredicted RBP9.02□□□□□ -0.97
UBP1-212ENST00000492136 ZNF330Q9Y3S2 320 aaPredicted RBP9.01□□□□□ -0.97
UBP1-212ENST00000492136 NAP1L5Q96NT1 182 aaPredicted RBP9.01□□□□□ -0.97
UBP1-212ENST00000492136 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
UBP1-212ENST00000492136 WDR43Q15061 677 aaKnown RBP eCLIP8.98□□□□□ -0.97
UBP1-212ENST00000492136 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
UBP1-212ENST00000492136 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
UBP1-212ENST00000492136 DDX10Q13206 875 aaKnown RBP8.98□□□□□ -0.97
UBP1-212ENST00000492136 SOX12O15370 315 aa8.98□□□□□ -0.97
UBP1-212ENST00000492136 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
UBP1-212ENST00000492136 PPM1GO15355 546 aaPredicted RBP8.97□□□□□ -0.97
UBP1-212ENST00000492136 CWC22Q9HCG8 908 aaKnown RBP8.97□□□□□ -0.97
UBP1-212ENST00000492136 PLCB2Q00722 1185 aa8.96□□□□□ -0.98
UBP1-212ENST00000492136 PPM1FP49593 454 aaPredicted RBP8.96□□□□□ -0.98
UBP1-212ENST00000492136 BECN1Q14457 450 aa8.95□□□□□ -0.98
UBP1-212ENST00000492136 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBP1-212ENST00000492136 MLECQ14165 292 aa8.94□□□□□ -0.98
UBP1-212ENST00000492136 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
UBP1-212ENST00000492136 TONSLQ96HA7 1378 aa8.93□□□□□ -0.98
UBP1-212ENST00000492136 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
UBP1-212ENST00000492136 SENP3-EIF4A1A0A087X0R7 540 aa8.92□□□□□ -0.98
UBP1-212ENST00000492136 VPS53Q5VIR6 699 aa8.91□□□□□ -0.98
UBP1-212ENST00000492136 KDM2AQ9Y2K7 1162 aa8.91□□□□□ -0.98
UBP1-212ENST00000492136 AK7Q96M32 723 aa8.9□□□□□ -0.98
UBP1-212ENST00000492136 ERICH6BQ5W0A0 696 aa8.9□□□□□ -0.99
UBP1-212ENST00000492136 SAMD1Q6SPF0 538 aaPredicted RBP8.89□□□□□ -0.99
UBP1-212ENST00000492136 PLCD3Q8N3E9 789 aa8.89□□□□□ -0.99
UBP1-212ENST00000492136 LAS1LQ9Y4W2 734 aaKnown RBP8.88□□□□□ -0.99
UBP1-212ENST00000492136 CASC1Q6TDU7 716 aa8.88□□□□□ -0.99
UBP1-212ENST00000492136 HIRIP3Q9BW71 556 aaPredicted RBP8.88□□□□□ -0.99
UBP1-212ENST00000492136 ARID3AQ99856 593 aa8.87□□□□□ -0.99
UBP1-212ENST00000492136 RAD21O60216 631 aa8.87□□□□□ -0.99
UBP1-212ENST00000492136 IBSPP21815 317 aaPredicted RBP8.87□□□□□ -0.99
UBP1-212ENST00000492136 MRS2Q9HD23 443 aa8.85□□□□□ -0.99
UBP1-212ENST00000492136 FBXW7Q969H0 707 aa8.85□□□□□ -0.99
UBP1-212ENST00000492136 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
UBP1-212ENST00000492136 ANP32EQ9BTT0 268 aa8.85□□□□□ -0.99
UBP1-212ENST00000492136 PAXIP1Q6ZW49 1069 aaPredicted RBP8.84□□□□□ -0.99
UBP1-212ENST00000492136 HSP90AB1P08238 724 aaKnown RBP8.83□□□□□ -1
UBP1-212ENST00000492136 KCNH8Q96L42 1107 aa8.83□□□□□ -1
UBP1-212ENST00000492136 DRC7Q8IY82 874 aa8.82□□□□□ -1
UBP1-212ENST00000492136 CHIC2Q9UKJ5 165 aa8.82□□□□□ -1
UBP1-212ENST00000492136 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
UBP1-212ENST00000492136 SPRYD3Q8NCJ5 442 aa8.82□□□□□ -1
UBP1-212ENST00000492136 OS9Q13438 667 aaPredicted RBP8.8□□□□□ -1
UBP1-212ENST00000492136 CHAF1AQ13111 956 aaPredicted RBP8.8□□□□□ -1
UBP1-212ENST00000492136 FGD1P98174 961 aa8.79□□□□□ -1
UBP1-212ENST00000492136 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
UBP1-212ENST00000492136 MSNP26038 577 aaKnown RBP8.79□□□□□ -1
UBP1-212ENST00000492136 PAK3O75914 559 aaPredicted RBP8.78□□□□□ -1
UBP1-212ENST00000492136 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
UBP1-212ENST00000492136 KCNJ4P48050 445 aa8.77□□□□□ -1.01
UBP1-212ENST00000492136 MIER1Q8N108 512 aa8.76□□□□□ -1.01
UBP1-212ENST00000492136 RGS3P49796 1198 aa8.75□□□□□ -1.01
UBP1-212ENST00000492136 MAP3K9P80192 1104 aa8.75□□□□□ -1.01
UBP1-212ENST00000492136 CREBRFQ8IUR6 639 aa8.75□□□□□ -1.01
UBP1-212ENST00000492136 SUPT16HQ9Y5B9 1047 aaKnown RBP8.75□□□□□ -1.01
UBP1-212ENST00000492136 SPDYE4A6NLX3 237 aa8.74□□□□□ -1.01
UBP1-212ENST00000492136 NRDCO43847 1150 aa8.74□□□□□ -1.01
UBP1-212ENST00000492136 CTDP1Q9Y5B0 961 aaPredicted RBP8.74□□□□□ -1.01
UBP1-212ENST00000492136 MYCNP04198 464 aaPredicted RBP8.74□□□□□ -1.01
UBP1-212ENST00000492136 GRM1Q13255 1194 aa8.73□□□□□ -1.01
UBP1-212ENST00000492136 GOLGA6L4A6NEF3 574 aa8.73□□□□□ -1.01
UBP1-212ENST00000492136 PAF1Q8N7H5 531 aa8.73□□□□□ -1.01
UBP1-212ENST00000492136 NOP58Q9Y2X3 529 aaKnown RBP8.73□□□□□ -1.01
UBP1-212ENST00000492136 KIAA2012Q0VF49 1180 aa8.73□□□□□ -1.01
UBP1-212ENST00000492136 STAC3Q96MF2 364 aa8.73□□□□□ -1.01
UBP1-212ENST00000492136 TNNT3P45378 269 aaPredicted RBP8.72□□□□□ -1.01
UBP1-212ENST00000492136 PPP4R2Q9NY27 417 aa8.71□□□□□ -1.01
UBP1-212ENST00000492136 FRAT1Q92837 279 aaPredicted RBP8.71□□□□□ -1.01
UBP1-212ENST00000492136 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.02
UBP1-212ENST00000492136 A0A0U1RQG5 324 aaPredicted RBP8.7□□□□□ -1.02
UBP1-212ENST00000492136 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms