RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
EPCAM-206ENST00000490733 FARP1Q9Y4F1 1045 aaPredicted RBP9.38□□□□□ -0.91
EPCAM-206ENST00000490733 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
EPCAM-206ENST00000490733 MYO15BQ96JP2 1530 aa9.36□□□□□ -0.91
EPCAM-206ENST00000490733 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
EPCAM-206ENST00000490733 NACADO15069 1562 aa9.33□□□□□ -0.92
EPCAM-206ENST00000490733 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
EPCAM-206ENST00000490733 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
EPCAM-206ENST00000490733 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
EPCAM-206ENST00000490733 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
EPCAM-206ENST00000490733 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
EPCAM-206ENST00000490733 METRNQ9UJH8 293 aa9.25□□□□□ -0.93
EPCAM-206ENST00000490733 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
EPCAM-206ENST00000490733 PELP1Q8IZL8 1130 aaKnown RBP9.21□□□□□ -0.94
EPCAM-206ENST00000490733 C7P10643 843 aa9.2□□□□□ -0.94
EPCAM-206ENST00000490733 MNX1P50219 401 aaPredicted RBP9.2□□□□□ -0.94
EPCAM-206ENST00000490733 SLC39A7Q92504 469 aa9.2□□□□□ -0.94
EPCAM-206ENST00000490733 SPNS2Q8IVW8 549 aa9.19□□□□□ -0.94
EPCAM-206ENST00000490733 UNC13AQ9UPW8 1703 aa9.17□□□□□ -0.94
EPCAM-206ENST00000490733 SCRIBQ14160 1630 aa9.17□□□□□ -0.94
EPCAM-206ENST00000490733 MIER1Q8N108 512 aa9.16□□□□□ -0.94
EPCAM-206ENST00000490733 SHROOM4Q9ULL8 1493 aa9.15□□□□□ -0.94
EPCAM-206ENST00000490733 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
EPCAM-206ENST00000490733 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
EPCAM-206ENST00000490733 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
EPCAM-206ENST00000490733 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
EPCAM-206ENST00000490733 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
EPCAM-206ENST00000490733 ASTLQ6HA08 431 aaPredicted RBP9.07□□□□□ -0.96
EPCAM-206ENST00000490733 BICRAQ9NZM4 1560 aa9.06□□□□□ -0.96
EPCAM-206ENST00000490733 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
EPCAM-206ENST00000490733 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
EPCAM-206ENST00000490733 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
EPCAM-206ENST00000490733 ZBTB47Q9UFB7 747 aaPredicted RBP9□□□□□ -0.97
EPCAM-206ENST00000490733 RASEFQ8IZ41 740 aa8.99□□□□□ -0.97
EPCAM-206ENST00000490733 TSPYL2Q9H2G4 693 aaPredicted RBP8.99□□□□□ -0.97
EPCAM-206ENST00000490733 ST18O60284 1047 aa8.97□□□□□ -0.97
EPCAM-206ENST00000490733 NUBP1P53384 320 aa8.97□□□□□ -0.97
EPCAM-206ENST00000490733 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
EPCAM-206ENST00000490733 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
EPCAM-206ENST00000490733 KLHL34Q8N239 644 aa8.93□□□□□ -0.98
EPCAM-206ENST00000490733 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
EPCAM-206ENST00000490733 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
EPCAM-206ENST00000490733 FAM212AQ96EL1 285 aa8.87□□□□□ -0.99
EPCAM-206ENST00000490733 KIF12Q96FN5 646 aa8.86□□□□□ -0.99
EPCAM-206ENST00000490733 TMEM121BQ9BXQ6 578 aaPredicted RBP8.85□□□□□ -0.99
EPCAM-206ENST00000490733 ATN1P54259 1190 aaPredicted RBP8.84□□□□□ -0.99
EPCAM-206ENST00000490733 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
EPCAM-206ENST00000490733 POTEFA5A3E0 1075 aa8.83□□□□□ -1
EPCAM-206ENST00000490733 MAP3K13O43283 966 aa8.83□□□□□ -1
EPCAM-206ENST00000490733 SPOCK2Q92563 424 aa8.82□□□□□ -1
EPCAM-206ENST00000490733 SLAIN1Q8ND83 568 aa8.81□□□□□ -1
EPCAM-206ENST00000490733 MROH2BQ7Z745 1585 aa8.81□□□□□ -1
EPCAM-206ENST00000490733 SMARCA4P51532 1647 aa8.8□□□□□ -1
EPCAM-206ENST00000490733 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
EPCAM-206ENST00000490733 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
EPCAM-206ENST00000490733 SEC24BO95487 1268 aa8.78□□□□□ -1
EPCAM-206ENST00000490733 PYGBP11216 843 aa8.78□□□□□ -1
EPCAM-206ENST00000490733 GSE1Q14687 1217 aa8.77□□□□□ -1.01
EPCAM-206ENST00000490733 TRPC6Q9Y210 931 aa8.77□□□□□ -1.01
EPCAM-206ENST00000490733 PCDHB13Q9Y5F0 798 aa8.77□□□□□ -1.01
EPCAM-206ENST00000490733 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
EPCAM-206ENST00000490733 SGIP1Q9BQI5 828 aa8.75□□□□□ -1.01
EPCAM-206ENST00000490733 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
EPCAM-206ENST00000490733 CIZ1Q9ULV3 898 aaPredicted RBP8.74□□□□□ -1.01
EPCAM-206ENST00000490733 WIZO95785 1651 aa8.74□□□□□ -1.01
EPCAM-206ENST00000490733 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
EPCAM-206ENST00000490733 BMP2KQ9NSY1 1161 aaPredicted RBP8.71□□□□□ -1.02
EPCAM-206ENST00000490733 PEG3Q9GZU2 1588 aa8.7□□□□□ -1.02
EPCAM-206ENST00000490733 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
EPCAM-206ENST00000490733 SNPHO15079 494 aa8.69□□□□□ -1.02
EPCAM-206ENST00000490733 TIE1P35590 1138 aa8.69□□□□□ -1.02
EPCAM-206ENST00000490733 CHRM1P11229 460 aaPredicted RBP8.68□□□□□ -1.02
EPCAM-206ENST00000490733 PCDHB8Q9UN66 801 aa8.68□□□□□ -1.02
EPCAM-206ENST00000490733 COLQQ9Y215 455 aaPredicted RBP8.68□□□□□ -1.02
EPCAM-206ENST00000490733 ATAD2BQ9ULI0 1458 aa8.67□□□□□ -1.02
EPCAM-206ENST00000490733 CC2D2AQ9P2K1 1620 aa8.66□□□□□ -1.02
EPCAM-206ENST00000490733 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
EPCAM-206ENST00000490733 SMARCA2P51531 1590 aa8.65□□□□□ -1.03
EPCAM-206ENST00000490733 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
EPCAM-206ENST00000490733 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
EPCAM-206ENST00000490733 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
EPCAM-206ENST00000490733 TMEM106CQ9BVX2 250 aa8.62□□□□□ -1.03
EPCAM-206ENST00000490733 TOP2AP11388 1531 aaKnown RBP8.62□□□□□ -1.03
EPCAM-206ENST00000490733 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
EPCAM-206ENST00000490733 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
EPCAM-206ENST00000490733 EMP3P54852 163 aa8.6□□□□□ -1.03
EPCAM-206ENST00000490733 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
EPCAM-206ENST00000490733 HMGXB3Q12766 1538 aa8.59□□□□□ -1.03
EPCAM-206ENST00000490733 RNF166Q96A37 237 aaPredicted RBP8.59□□□□□ -1.03
EPCAM-206ENST00000490733 BAZ1BQ9UIG0 1483 aaKnown RBP8.58□□□□□ -1.04
EPCAM-206ENST00000490733 IER5LQ5T953 404 aa8.58□□□□□ -1.04
EPCAM-206ENST00000490733 PSEN1P49768 467 aa8.56□□□□□ -1.04
EPCAM-206ENST00000490733 RNF25Q96BH1 459 aaPredicted RBP8.56□□□□□ -1.04
EPCAM-206ENST00000490733 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
EPCAM-206ENST00000490733 PKD2Q13563 968 aa8.54□□□□□ -1.04
EPCAM-206ENST00000490733 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
EPCAM-206ENST00000490733 CCDC88BA6NC98 1476 aa8.53□□□□□ -1.04
EPCAM-206ENST00000490733 FAM205CA6NFA0 338 aa8.5□□□□□ -1.05
EPCAM-206ENST00000490733 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
EPCAM-206ENST00000490733 ECM2O94769 699 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms